Array 1 29980-30670 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUKF01000070.1 Bacillus cereus strain AFS044532 AFS044532_120_D8_Contig70_140618, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 29980 30 100.0 36 .............................. ATTGCCTTAACTGTAAAGCTATATTCTTCAGCTTCT 30046 30 100.0 35 .............................. GGTAAATCGGGCAAATTGTCCATTGGGTCTTTTAT 30111 30 96.7 35 .....................C........ CTTGCTACACTTTCCAATAACCATGTCGGAATCCA 30176 30 96.7 37 .........A.................... TTTCAATTAGTCGTTTGTGATAAATGATTGCAAGTGC 30243 30 100.0 36 .............................. ATAAGTACAACGTCAAACTCTGTATATTCCCTTCTA 30309 30 100.0 37 .............................. CAAATGGTGGCTACCCGTGAAGGGTTTGAAATATGGT 30376 30 96.7 37 .........A.................... TGCTCTAAGACTACTGCATTCCCATACCCTCCAAATC 30443 30 93.3 36 ...A.....A.................... ATTTTATCTTCTAATGGTTTTCGTGGTCTTGGCATT 30509 30 93.3 36 .........A......A............. AAAGAAAAGGCAATGTGTGGTGCAACGAGTGTAAAA 30575 30 90.0 36 ......T..A......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT 30641 30 76.7 0 A.....T.GA......A......A.....A | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 94.9 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAATCCAAAGGTACATCCCTTAATGGGGATGTGCCTTTTTTCGTAGAAAGGGGAATTATTAATGGATAAAAAGAAAAAACAACGTGTTAGACGTGTAATTATTATAGGGATTGTCGCAATGATTTTATTGATATACAGTGGGAACGAATTTCAGGAGAAGAATGGAAGAATCTATGCTCCTGCAAAGTATTTCGAGACGGGAACAAAATTAGTTTCATTTTAATCTTTTTCATATTTTCATCGAACAATATGGGGTAATACGGAAGTTGCCGAACGTTTTACCAGATTATTTACCAACCTAATTAATTGGTGATAACATGTAAATGTAGATAAAGTAAGGAAATTCTGCATAAATTATAAGTGAATGAGATTTATATCAATTAGCTGGTAAAAAACTTATAAACCCACGTTTCTATAGTATAATAGTGGATACAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : AGCTAAAAAATGTTATTGGTTTAGGAAGTAATATGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAGCACACTCTTGATTTGAACTGCCCCCTATAAAATAGGCAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAACGGAAATATAAGGTGGGGAGGATAGAGTGCTGAATGAGCTCAGTATAATTTAATTGTTTACATTTTTGTAAAATAAATAAATCGTATTATTTATTATAATATGATATCCTATTTTTAGGAGGTGTGAAAATTTGAATTTTGAGTTAATAGTTACAACTTTATTGAAAGAAGATCTTCACTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATAAACAAAGTGATGCTTCAAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGCAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGCCGAGTGTATGTATTTCGAT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : GTTGAACAAAAACATATGATGTATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 39848-40074 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUKF01000070.1 Bacillus cereus strain AFS044532 AFS044532_120_D8_Contig70_140618, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 39848 30 100.0 36 .............................. GTCATAACGTCACAACACCTCCTAGTGAGAGTATTC 39914 30 100.0 35 .............................. TATACCTGATACGATGTAGTTTTATCACCGTATGT 39979 30 100.0 36 .............................. AGATTTAGAGAAGAAAGAAGTTAAAGATAATACAGC 40045 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 99.2 36 GTTGAACAGAAACATAAGATGTATTTAAAC # Left flank : AATTCTTTTATTCCATTTAATCTAAAGGAGAAAAAATAATGAAAAATCAAATGAATGCTAATTATGCGTTTGTTTTTTATGATGTAAATGAGAAACGAGTGACGAAAGTTTTTAAAATCTGTAAAAAATATTTAAATCATTATCAAAAATCTACTTTTAGGGGGGGGGATTACTCCCTCAAATTTATTAAAAATGGAAAAGGAAATTAGGAATATTATAAATGAGGGGGAAGACTTAGTTACTATTATCAAAATGCTAAATGAATATAGCTTTGATGAGATTGAAATAGGGTATAGAAATAATAGCGATCTCCTATTTTTGTGAATTTACCAAGTGAAATGATAGTGGGAATCTAATAAACTTTGTTAATTCAAGACTTATACTATTTCTTTTTGAGAATTTTATTTTTTTTATGAACTGCTGGTAAAAAAATCACTAAACTCATATGCAGTATAGTATTATATAAAATATGAAGGTAATAAAAAGTTGATTTAATCGGT # Right flank : ATTTTGGTCTATTGATTTTACCGTAAGTACGTAACTTGTTGAACAAAATTCTTAAATTAGAATTGATTTCGAGTAACTCAATAGATAAGCTAAAGGAAAATTTTTAAAGAGAGAAGTTTTTTCATAGAAAGGGGAATTAAGAGTAGGAAAATCTATGCTCCTGCAAAGTATTTTGAGACAGGAACAAAATTGATTTCGTTTTGATAATAATTTGGTCTCTTTTACCAACTATAGTGAACAAATCTGCATGACATGTACTATAGTTGATGTTATAATATGTGTAGAAGTATTATAACAATAGTTTTTGCATAAACTAAAGAAGACGAAGTGCTGGTAACACTTCGCCTTATGTAACAGCTACCGCAAGGTGGTTGGTTACTAAAAATTTAGTTATTTTTTATTGAACCACCAAGTACGTTTGCGGCGTTGGGTGGTTCTTTTCGTTTTTCGTCGCTTTTTTTGTCTTTTTTTTCAAAACGTTGATAGGTATTTCCCTATAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGAAACATAAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //