Array 1 164289-162689 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNR01000002.1 Anaerovibrio slackiae strain WCA-693-APC-5D-A seq2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ======================================================== ================== 164288 23 100.0 44 ....................... CAACGTAGACCACAAGGAGCACATTATATCAAGTTAAAAACAAA 164221 23 100.0 51 ....................... CGTATAAGCTGATTAGTTTTCCTATCAGTGAGGAGGAGTGTTAAAAACAAA 164147 23 100.0 50 ....................... GATGTGCAGAAGGGTGTACAAGGGCGAAATAAATTCTTGTTAAAAACAAA 164074 23 100.0 54 ....................... CGACAAACCACGGCTCGCCATCAACCTGTACAACACGTACATGTTAAAAACAAA 163997 23 100.0 56 ....................... CCCATCAGCTTCAGTGCACGCAAAAGAATCAAGTATTACGACATGTTAAAAACAAA 163918 23 100.0 53 ....................... CTGTGCCACCTGCATGAGATGGCGAGAGAACCATAAAACCCGTTAAAAACAAA 163842 23 100.0 50 ....................... CCTTTCAAATCCTAGAACAATTTTAAGTTATCTATATTGTTAAAAACAAA 163769 23 100.0 50 ....................... TATGATTGATACTGGTGTTGTTGCCGTAGAAAATAGTTGTTAAAAACAAA 163696 23 100.0 53 ....................... TGATGGCGAATTGATAGCCATCAATAATGGCTCTGCCTCAGGTTAAAAACAAA 163620 23 100.0 50 ....................... TTAATAGCCTTCTTTTGATACAAGCTCCTCAACAATTTGTTAAAAACAAA 163547 23 100.0 54 ....................... CCATTGTCAGACCACTTGTTTTCGTTGCAGTGCTCACAATAGGTTAAAAACAAA 163470 23 100.0 50 ....................... TGGCTGCGCTCCTGGACTTAATGGACGCTCGTTCATGTGTTAAAAACAAA 163397 23 100.0 54 ....................... TTTCCGCCACTAAGCTGCGGTATTCGTCGAGAGTAATTTCAAGTTAAAAACAAA 163320 23 100.0 52 ....................... CAAAATCCGTCATTCGTTTTCCCTCCTATTCTCAAACCTGGTTAAAAACAAA 163245 23 100.0 54 ....................... CCGCCGGATATAGCCTTTTCTATATCCTGGCTATAGTCTATCGTTAAAAACAAA 163168 23 100.0 56 ....................... GCTTGGACAGCTCCAATAATTCCTGGGCGGACATGTTTTCTAAGGTTAAAAACAAA 163089 23 100.0 52 ....................... GGAACCGTTTGATGCGTAGTACCGCTGGGTACATGGTTACGTTAAAAACAAA 163014 23 100.0 52 ....................... AATCATTCTCCTCTCACTTAATCCACGGGTTAATCTGGTAGTTAAAAACAAA 162939 23 100.0 56 ....................... AAATCCTTAGCGTTGATGTATTCCTCAGCATCTTCTGGGTAATCGTTAAAAACAAA 162860 23 100.0 52 ....................... TTTTACCCCACTGGCTTACTGTTTTCTTGGTCCAGAGATTGTTAAAAACAAA 162785 23 100.0 51 ....................... TTAGTTTTTACATATAGTCTTTTAAGTGTTTTAAGTTCAGTTAAAAATCAA 162711 23 87.0 0 .C......T.............A | ========== ====== ====== ====== ======================= ======================================================== ================== 22 23 99.4 52 AATCCCCGGAAGGGGACGGAAAC # Left flank : TCAGCTTTAAGCGTGATGGGCACTATGTTATCCTGCCGGAGCTCTATCTCATGTTCCAAAATCTGATTGCCAGATGGAATAAGCTGTTTCCAGAAAATATCATCAGCGCCCAGGGATTGGAGCATGAATTGGCAAGCTGTTGCCATATTACAAAATATGCGCTTCATACACAAACTTTTTCAGTAAATAATGGAAATGTATATGGCTTTTGTGGTAACATAAGGGTAAAGTTTTCTGGCAATGATATGACCAGAAGATTGATGAATTTGATTTTCCTGTATGCTAATTTTGCCGGTATCGGCATCAAAACTGCACTGGGAATGGGAGCGGTAGATTATCAGGGATTTGCAAATCCCCGCCGTTCCTCGTAAATAGTGGCTTTAGGGGAGTTTTTTTCGGGTAATGGCTGCTTGCGTTGCCCTGAAAAAATCCTCCCCGCCGCAAATAGTCCTTTGAGGGCAGTGCTATCAAGCATCCCAGGAGATGTAGTTAAAAACAAA # Right flank : CTTAATATGGAATGGGGAATGTATATGAGTTTTGTGTATATCACGGAAGAAAATGCCAAACTTCAAAAGAAAGGCGGCAGGTATCTGCTGGGGCGCAATCTGGAAGTGATAATGGAAATCCCGGAGGAACTGCTGGAGGGGCTGGTCTTGATTGGTCGCATTCAAGTTTCAGCTGAGGCGATGGTAAGCCTGCTGGAAAGCGGTGTGCCAGTGACCTGGTTGTCTCACACCGGAAAATATTATGGAAGGCTTTCTTCCACAAGCCATGTGGATGTGTTCCGGCAGCAGAAGCAGATACAGCTGCAAAAATCGCCATTTTTCCTGACACTGAGCAAAAAGTGCATTGAAGCAAAGGTGCATAACCAGCTTACTGTCCTGCGCCGCTACAACCGCAGGGCGAACAGCAGGGAAGTGGAGACAGCCATAAACAATATTCTGGCAATACGCAGGCACATCGGTTCAGCAGAGGATAGTGAGCAGCTGATGGGCTTTGAGGGCAT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGGAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 198658-198389 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNR01000002.1 Anaerovibrio slackiae strain WCA-693-APC-5D-A seq2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 198657 28 100.0 33 ............................ GTTATAGTTTTCCCAGCAAACGGCTTGATGTCA 198596 28 100.0 32 ............................ AGCAAATCAGCTGAAATGCTGGATTGCTGGAA 198536 28 100.0 32 ............................ ACCAAACGTGGTAAGTCTGCGGTTTTTCAAAG 198476 28 100.0 32 ............................ AAAGAAAAAGCACTAGCACAAAAAGACAAACT 198416 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 5 28 100.0 32 GTTATCCGCTGCATAAGCGGCTTAGAAA # Left flank : CATTTATCCAGGTTAATGTGTGGGATAAGTTAGCTGAGGCGTGTGTCAATAATGTGTATACTGGCGATAAGATTGTCGTGGAAGGTAAGTTAAAATCTACGACATATGATTCAAAAAAATATCCAGGCGCCAAAATAACCCAGCATTATATTGAGGCATATCATGTAGAATTTGATCCGAGAAATATCGGTAAGAAGCCATCTGGAAATGAGTATACAGATGATATTCCATTTCCATCTGAAGCATCTACAGTGACTGCTGCTACTGTCATTGATGAAAGTTCATTTACAGGTGGTGGACAAGCTGGAACAAAGCAGGATGAAACCAGTATTTTTGGTGGGCATGAAGTTCAGGAAGAAATTCCTTTTTGAAGGATAACAAAGAAGGCAGCCAGTGTGTACGCACAGGCTGCTTTCTTTGAGTAGAATTGTAGTTTGGTCGAATTGTGAATTTACCTTTCAATATTGCACCAGATATAATGTTTAGTGTAAAATATTGCT # Right flank : TGCATGTCCAAGAAAATGGCGTTGAGATAGTAGACAGGATTAAGTCCATAGGGCAAAAGATTCTGGCAGATGAGCTAGCAAGAAAAGCAAATCAAAATAAAGGCCGGTGATTTATAAAGAATCATTCACCTGATGATAGTTTTGTTTTAGATATATGAGTGGATTTTTATACAAATTTGTGCTAATCTATCTATGTGAAATTTCGATATGTATAAACATTCATGAACGTTTTGGTGCCAAAATGTGCATTTTGTGTGGGCATAGAATCGGTAGGTTGTTGTTTATAGGTGAATTTTAAGTAAAATATTACTCGTAGAAGTGCGTTAATTCACTTAGTGAGCGTATATGAACAATAACCAAATATCTCCAAAACCGTAGGTTGTGAGTTCGATTCTTACTGCCCCTGCCATTTTTTTACGGAGCAGTACTCAAGAGGCTGAAGAGGACGGTTTGCTAAATCGTTAGGGTCGCAAGGCTGCGGAGGTTCGAATCCTCTCTGC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCGCTGCATAAGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 26474-26301 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNR01000013.1 Anaerovibrio slackiae strain WCA-693-APC-5D-A seq13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ===================================================== ================== 26473 23 73.9 51 TG.T...AT.T............ TCCGTCATGCGCTTAGTATCAGTAGCGTACAGCAGCGTAGTTAAAAACCTA 26399 23 95.7 53 ..C.................... ATTGCCTCCTGGTATTCGGAATCCTTTACTTTCAAACCATCGTTAAAAACCAA 26323 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ===================================================== ================== 3 23 89.9 52 AATCCCCGGAAGGGGACGGAAAC # Left flank : CATAAGACATTCTCCTTTCTTAGAAACCAAACCTCTGCTTAAAGTACACGATTGGCACTTTGCCCGGCCTTATGAATTTGCCATCCGCCTCCAGCTCCGCGTTCAGTTTCTTAATCACGCGATAGGCGTGCTGCTTGGAGTAGTCGAGGATGCTTGCCACATCCTCCGCCCCGTAATATAGCTTCTTTGGTTTAAGCACTGGCATCTTTCCTGCCTCCCTTCTTAAACTCTCTCACCGGCGTATAATCTGTCCCTTCGCCGACTGTAATGCTGGTTCCCAGCACCTTGCACAGCTGGTTTGCGGCCCTCAATGTCGGCTCTATCTTTCCAAGCTCATACAGTGAGATGGAACCCACTGATATGCCCGAAAGTTTTGCCAGCTGGCGAAGGGATATTTTCTTTCTGTAGCGGGCTTGCCGCAAGACATCCATGAACTTCATATTTCCTCCTTGAGTGTTCAATATCATTGACAGTGTTATCTATCAATGATAAAATTTTCT # Right flank : TCAAAGAAGCCCTGGCTGTTTCTCATTCGGCTGAGACTCTGGTGAAGTTGAAGCAACCGGAGTAACCACCCCTGCATAGTATTTTGCAGCATCGAAAACCATACCAATTTGATTGAAATTTACGTTGTTTGCTGCCAACACATCAACGATTTGAAGTGCTGCAGCTTTCAAATTCAATCTCCCGTCACGACCAGCATGAGGTTTGCTAATCTCATACTGGTCTATTTCTTTCCCCCTCACACGAGCTACCAACTTAATAAATTCACTGTACTCAAAATTCAATTTTTCCATTGTTAATCTATCCTTTCTCTGAAATTGTCCGCTAGGACAATTATCCCGAACTGGCTTTTCTGCTGGTTCGGTTTTTTTGTTTCCTGCCATCAATTATGCTCCAAATACTGCGGTGTTCATTTTATCTATAACGGATTTCGTTAGTTTATCGTTCAAAAAAACTGCACTATCCTCACCGAGCAGACGAGCAATAACCTTCATTCGCTCCA # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:-0.80, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGGAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 83765-82399 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNR01000006.1 Anaerovibrio slackiae strain WCA-693-APC-5D-A seq6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 83764 37 100.0 38 ..................................... ATGAGGCATATCCTGCCCCAGATATCCCCGACTGTACC 83689 37 100.0 37 ..................................... ACCTTGTTATCCTCTACAAAATTATTGATGAAATCGA 83615 37 100.0 34 ..................................... CTCCTCAAGGCGACGCTGCAGTGCTTCGTTCTGA 83544 37 100.0 38 ..................................... CGTGCGCGCAGGCGTTAATAATCAAACACCACTGGTAC 83469 37 100.0 38 ..................................... TTACCATCCCTTGGACTGCTTGGCCCATACAGAGTTGA 83394 37 100.0 37 ..................................... TTCATTTAGGGTTATCCTTATATTTTCGTGGTTTTTC 83320 37 100.0 37 ..................................... ATAACATCAAGGACATTCAGTCCAGAATCAAGTTCAT 83246 37 100.0 39 ..................................... CGGGGATAATTATAGTTATAAATATCAACTATATGAAGT 83170 37 100.0 38 ..................................... ACCTAATACGTGCTTCCAGAACTCTCTTTACTTCCATA 83095 37 100.0 39 ..................................... TAGCCCCTGCTACTGTCCTCCCCTTATTTGTCTCCCTGG 83019 37 100.0 36 ..................................... AGATACTGTTTGCGTCCGAGGACGGCTTGGATATTC 82946 37 100.0 37 ..................................... CTTGCGTCCTCCTCAGTCTTAAAAACCTTTAAGTCAA 82872 37 100.0 35 ..................................... AACATCCTTGCCGTTACTCCGTCTATGCTTTTAAC 82800 37 100.0 35 ..................................... TACGGATAATGTTATGATTTGACACAGAGAATTCA 82728 37 100.0 36 ..................................... CTCTAAACCTATTGACAAGAATAACTTCTACGCTTA 82655 37 97.3 39 G.................................... CCGAAATTCAGCTTAACAACTTCATTGCCGTCCTTATCA 82579 37 100.0 36 ..................................... TTCTCGTCCATATCTGCCTTTACAAAGATAACATCA 82506 37 100.0 34 ..................................... TTAGTCCCGCAGGACTAAAAGGCATAAGCTCAAA 82435 37 91.9 0 .............................G.AA.... | ========== ====== ====== ====== ===================================== ======================================= ================== 19 37 99.4 37 ATTACGTAAGAACCAATGCCGCGTGCGGCATTGAAAC # Left flank : GCTTATGATTATCCAAATCTTATTATGAGTACAGGTTCCTTTAATTGGGATGACCGCAAAGAAAGCATTTGCAGGATGCTGACTGAGGGAATTGTTTGTACCGATACATCTGATATAGAAAATCTATTATATGTGATGGAAATTTTGTCATGGCTCAGAAAGCAGCGTAATGAGATTAATCATGCGTATAATGGTGTTGATGTTGCCTCCAGCGAGGATGTTGAGCATTATATTATGTTGGCATTGAAAAAAATTGAGCAGTTAAACTGAAAATTGCAAGTATCAAAAAAATGTGGTATACTAGTTATGCAGTTGAATTTTCGTTGCAGGGGCTGATTTAGCCCCTTGCAAATTAATAGCGCGAAGGGCTGTTATTTCCTGCTTTGCGGGTTATGCTTTTATAGTGTGCAGTGCAAATTAAGCGTTTGTTTGCCGTTGTCGGCTTTGTAAATTAAAACTGTGTTTCAGGTTCAGTGTTTCTGCGGTTTGGCAGGGACACG # Right flank : ACCATATATAATTTTGGGCTCCCTGTGTGTATTGCACAGGGAGTTATTTTTTGCGCAAAAATTCACATTTTTTTTGCTCATAGTAATCTACACAGATAGCTATACTATACCTATAAGATGTCAATTGGAGGTTCAGCATGAAATATTTGATATGTTATGATGTGTCCAGCGATAAATGCCGCAGGCGTATTGCCAAATATCTGGAGTCATTTGCTTATAGGATGCAGTACAGTGTTTTTATGGCGCAATGCACCAGTGAGCAGATAGAAAAGGTGAAAAACAAATTATTTTGTCTGGGGAATGGGCAGGCGGATATTATTCTCACCATTGTTCCCCTGTGCCAGAGCTGTGAGGCAAAGATGTGGCAGTTTGGCAAGCCTATGGAAGTAGCACCGATATGCGTGATTGCCTAGAATCATAAATGGCATATAATACATGGCATATAAGATATGACATATATTGCAGGATAGGAGCGATTATTATGAGCACGGTATATTTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACGTAAGAACCAATGCCGCGTGCGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.00,-8.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 86590-86332 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNR01000006.1 Anaerovibrio slackiae strain WCA-693-APC-5D-A seq6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ==================================== ================== 86589 39 94.9 35 CT..................................... GCGCAAGACACGGATGCGCTTTCTACAGGGCGATT 86515 39 100.0 31 ....................................... GTCTCGGAGAGCAAAGTCTCCTCTAAATAGC 86445 39 100.0 36 ....................................... TTGCTATTCCAGTGTGCAACCCCAGGAGAATGGTAC 86370 39 97.4 0 .....................T................. | ========== ====== ====== ====== ======================================= ==================================== ================== 4 39 98.1 34 AAATTGTGCACAGGGAAATGCCGCGTGCGGCATTGAAAC # Left flank : TTTGCCGCCTGCACACGGAGCAAAAATTCCTATGCCAATGAATTGAATGATTTGCAAAGGCATGTGCAGGCTGTATTGGCACAGCCTGATTTGCCGGAAGCTGTACTGCGTGTCGCAAATGATTTTGCCTGCAAGATTTCCAGCCTGGAGGGAGACTCCGTGGAAGCGAGGCAGGTATTGCGGGAGGCTGCGTCATCAATTCCTGTCTTGTGAGGAAGAAATCATATCTGGCAAGGCCCAGGAGCGATAATAATTGACTGCTGGAGATTGTTATGATAAAATTAACCCAGAGTGAGGGCTGCTGTGAACCGTGAAAAATGGCAGTCGTAAGTTGAATATTTTCGTGGACTAAAGGAAGCCTTTGTTGCAGGGGTTTGCGGATTGTTTTTCGGCTTTTGGGAAACAGTGTCCACGAAATATTTGGCGGTTTTTGCGAAAAGCAGCCGCTTGAGATAATTTTTAGTTTTAACCCTAACATTCCCGTTGGTTCACCGGGGATG # Right flank : TGACACACCAAATAAACTACAGAAAAAACCAGACAGGATTGTGCACACACTACCATATACAATGAAATTCGACGGGTAACACCCCATCCTAAAAGCAATCGTGGGCGTAAGCCACAGTATACAGCCAATCGTGGGCAGAAAGCTTATGAAGAACACCGGAAACACTCTAGGAAACCTCTGAAAATTTATTGTGACGATTGCGAACTATTCGTCCAATGGATGGTAGCGCAAGTACGCGATAAGCGTTGGTCGATAGATGCCTGCGTAGGGTATGCCAGACGTTACAATCTGTTCAATGCAAAATACATACAGCTATGCCTTGATTAAGCTGCTGCAGGAGGCAGGCGTCACTGTCCTGGCTGCCTGCAGTGAACGGCAGACAGTGACCACTGTCAACGCGAAGCAGGAAACTGTGCGGCAGTCGGTATTCAGTTTTGTGCAGTTCCGCAGCTATGGCATGGAAAACGATGGGGAGAAATCATGATGAAAAATGCAGTTTT # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAATTGTGCACAGGGAAATGCCGCGTGCGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.70,-8.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA //