Array 1 159-1501 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOEE01000004.1 Thermotalea metallivorans strain B2-1 AN619_contig000011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================================== ================== 159 30 100.0 37 .............................. TGACGTAAATGTTAGTAAAATGGACTCAAAACAATTG 226 30 96.7 37 A............................. ATGAAGGAGATTAACAGACTATAGCAGCAGCGGTTAG 293 30 100.0 35 .............................. TTTGCATACAAGAACAATCAACGAAGAGATATTAC 358 30 100.0 35 .............................. TTGAAAACAAGAGGAGGTTTTGAAGATGAATTACA 423 30 100.0 38 .............................. TAGTTATGAATCCACCGTTTAGCAATGGGGATAAACAC 491 30 100.0 38 .............................. TCAGAATCAAAGAAGGACCAAATAAGGTAGAGATTAAG 559 30 100.0 79 .............................. ATGGGCAAGCAGTGACAGCAGATGGAGAAATCATTGAAGGGATTACGGTTATTGAGCAGCCAGAGAAGATTGAGATCAA 668 30 100.0 37 .............................. TAGGCTCCACTGTACAGAAGCTTTTTGTATTTCTCCA 735 30 100.0 38 .............................. CCACTTCCAGTGATTTCTATGGCATAAAAAATTGCTTC 803 30 100.0 36 .............................. CCCACATCAATTCCTGCAATGGGTCTGAAATTCATT 869 30 100.0 36 .............................. CAATGTCAATAAGTTCGGCAACAGCTCCATAGAAGT 935 30 100.0 37 .............................. AGTCTTGCGATAATCTCCATACCAAGCTCTGTTTTGC 1002 30 100.0 36 .............................. ATATACCATGATGGATCTTCAAATCATGTATCAGAA 1068 30 100.0 38 .............................. AATACAGCGGGGAAAGGAGAAAACATGATACACGAATC 1136 30 100.0 38 .............................. TTAGTTTATCTTCAACTTCGAACAAAATTAGCGTGAGT 1204 30 100.0 36 .............................. TTGTGATGATGATAGGGCTGACCCTGACGGCCTTAG 1270 30 100.0 38 .............................. CGTCACCAACGCAAGGATGATGTGTCCTGACGGCTCTG 1338 30 100.0 37 .............................. TTGTAAGGCATCCAAAGATAACAGGAGAGTTCGAGAC 1405 30 100.0 37 .............................. CCTGTAAAGTAAAAATACTTAACAGAGAAAATATGCT 1472 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================================================================== ================== 20 30 99.8 39 GTTGATAGACTTCCTATGAGGAATTGAAAC # Left flank : AAACTGCTTTACAGGAAAAACTGTTCCTGACAAAAGAGACGATTAATGAATTTTTGGACTACTTTGTCTCGACTTTGCCTGATTATATCAAGCTAAAGCTATCAGTTGCTTCCTGCGAAAGTTGATTGATATACTAATAAAAAATATAAAAATAATATG # Right flank : CTTCAGCAAGCCATCCGTGATATCATCACCACCATATGTTGATAGACTTTGTATAACCAATACTCTAGAGGAGGTGCCTGATATGATTTTAGTATATCCAAGAAGAATTTGTTTATTGATTGGTATTTTAAGCTTAGGGTTTTGGCAGGCTGTGGTTTTAAAAAACCGGAGGAGCAAAAAGGACCGGAGACAGTAGCAAACCAGCCTGTACAAAATGAAGAACCTCAGGATGTAAAACGAGTAGCAGGAGTCCATGTAGGACAAATAGATGGAAATTCCATAGAAGTACAGATGGATGGAGAACCTATGGTTTTTTGTATGGTGGATATTGGAAAAGCAATAGACGATATCGAGGAGGGACAAAAAGTCAGCGTTGAATATGAAGAGGGAGAGAATGGGCAACTGTTGCTGGTGAAAATCGAAAAAATTGACTGAGGAGTGTAGGAAAAAGACAGATGAAGCACAATGTAAAAATAAGGATGCAAAAATTACCTTTACAA # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATAGACTTCCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.10,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : NA // Array 1 5128-162 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOEE01000056.1 Thermotalea metallivorans strain B2-1 AN619_contig000063, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 5127 30 100.0 38 .............................. CCTTGAAATGGTAGATCCTATAGATGCTTATGAATTTT 5059 30 100.0 36 .............................. GATGCATTAACTGAACCCATGATAAGAAAACAAAGA 4993 30 100.0 36 .............................. CAAAAGCGGAAAAGTTATTTGGATAGATTCATTCAT 4927 30 100.0 40 .............................. CGTCAATGCTTCCACAGTGAATACATACATAAGGCGGTTC 4857 30 100.0 35 .............................. GCAGTACAGATGGCAGCCAGGGAGAGAGGGTATAG 4792 30 100.0 37 .............................. TCTTCCGGTGAAGCAATTATCGTTAGAATGGCCGGAA 4725 30 100.0 36 .............................. TGCTCACAGGACGTTTTACGGTGGAACCATTTCTGC 4659 30 100.0 37 .............................. TTAAGAGGAGGTAGCGACGATGAGTAAATTTTTGGAC 4592 30 100.0 38 .............................. TTCGGTCAATCTTCCAAACAACCAGGTGCGTGAATTCA 4524 30 100.0 37 .............................. CATGATGTAATGCCCTACATGGTAATAGACGGAAAGC 4457 30 100.0 35 .............................. TCTTGAGCATAGCCTCACCCATAGCAGATGAGGTA 4392 30 100.0 37 .............................. CGCTACGAATGACGAAATCCGCAAGGAGTATGGAAAG 4325 30 100.0 35 .............................. TGACTCAAAGGGAAAATTCAGAAATGATAACGGTG 4260 30 100.0 36 .............................. CTCAGAACAACCAAGAATTGAAGTGGTCATTCAGAC 4194 30 100.0 36 .............................. ATAATCAAGACCAAAAGATTATAAAATACCTGAAAA 4128 30 100.0 37 .............................. TTTCATGTTCCAGCCTTTCCTCAAGCTTTTGTTGAAT 4061 30 100.0 37 .............................. TTCGAAACACTCTTCGGCTTCCTTTTCTTTGGATCTG 3994 30 100.0 36 .............................. GCTTCATTTCGAAGTAAAACTCTTGCCATGCCTGCA 3928 30 100.0 36 .............................. CTTCATCACCCCACCAGGAATATTCACTAATTGGCC 3862 30 100.0 36 .............................. ACCAGGAAAGAAAGGCCAGCTGCTGTAATTCATAAA 3796 30 100.0 36 .............................. CTTATATCCAGACTCAAAATAGAATTTGAGGGACCT 3730 30 100.0 36 .............................. CCGTTTGCATACTGCTTCGCAATGTAGGTTCTCTCA 3664 30 100.0 37 .............................. TCGGCTGTCAAATAAGTTGTTTGTGGGAAGATTTTAG 3597 30 100.0 37 .............................. TCGGCTGTCAAATAAGTTGTTTGTGGGAAGATTTTAG 3530 30 100.0 35 .............................. AAATGTGTACTTAGAATCCCAAGTCTTTCATTTTG 3465 30 100.0 37 .............................. CCTGAAAATTGGGACGATATGGACATTGGCGCCAGAA 3398 30 100.0 38 .............................. ATAGTTCAGGGCTTTCATAGATGTTCACGCTTCTCCCC 3330 30 100.0 38 .............................. TCTCTTCTTTTTTCGTAAGGCGGGTTAGGACAATCTCC 3262 30 100.0 36 .............................. AGCCACATTCTTGACAGGCATATTCTCTATTAATCA 3196 30 100.0 37 .............................. TGCTTTGGTACTGTATAAATGCACTATCTTCTTCCGA 3129 30 100.0 35 .............................. TAGCGATAGATTCAAAGACATCGCCACCACTGGAA 3064 30 100.0 36 .............................. GGAGTAGAAGAATCCCAGGCTGATTTATGGCAGATT 2998 30 100.0 38 .............................. ATTGCAAATAATCTACAATTAGCACATCAAATTTTTGT 2930 30 100.0 36 .............................. AATTTTGAATAGTACCACCTACTTGTTCGGCAAATC 2864 30 100.0 36 .............................. AATTTTGAATAGTACCACCTACTTGTTCGGCAAATC 2798 30 100.0 36 .............................. AATTTTGAATAGTACCACCTACTTGTTCGGCAAATC 2732 30 100.0 36 .............................. AATTTTGAATAGTACCACCTACTTGTTCGGCAAATC 2666 30 100.0 37 .............................. TAGTACACTTCGGTTGCAAGTTCTTCCACACACACAT 2599 30 100.0 36 .............................. TTTCGTCAGGGTTTTCAACGAGACCTAAAAGATAAT 2533 30 96.7 38 A............................. TATACCTCAACCATCATACAAACCACATCATCACCTGG 2465 30 100.0 38 .............................. GGGGGAAAGTGGTTTTCAGACTCTCTCACGACAGTACA 2397 30 100.0 36 .............................. AGCCACATTCTTGACAGGCATATTCTCTATTAATCA 2331 30 100.0 37 .............................. TGCTTTGGTACTGTATAAATGCACTATCTTCTTCCGA 2264 30 100.0 35 .............................. TAGCGATAGATTCAAAGACATCGCCACCACTGGAA 2199 30 100.0 36 .............................. GGAGTAGAAGAATCCCAGGCTGATTTATGGCAGATT 2133 30 100.0 38 .............................. ATTGCAAATAATCTACAATTAGCACATCAAATTTTTGT 2065 30 100.0 36 .............................. AATTTTGAATAGTACCACCTACTTGTTCGGCAAATC 1999 30 100.0 37 .............................. TTGTTTTTATCGTACATTCCATATTTTGCCTGATCAT 1932 30 100.0 38 .............................. TATTGAATAAAAAATAATAAGTTTTCTGTGTTGTACTA 1864 30 100.0 36 .............................. TTGATCCACTCGTCGGGTATCCAGTCTCCGAACAGG 1798 30 100.0 36 .............................. TATATCTAGAAATGGGATGTTGTCATTTTGAATATG 1732 30 100.0 36 .............................. GACAATTGTTCGCTTGTGTAATATTGACTTAGCGAA 1666 30 100.0 37 .............................. TTATATGTTTCTCTTTCCTTATCCTCCTGTTCTTTTC 1599 30 100.0 37 .............................. AAAGAACTGATACTAAATATTGCTAATATATATGATT 1532 30 100.0 35 .............................. TCAGATAGAGAATGGATATGTCCTGAATGTGGAGT 1467 30 100.0 37 .............................. ATTGCTATCATACATGATGGAAAGTTTGTAGAGTTTG 1400 30 100.0 38 .............................. TATAGAATACACAAACAATGATGTTAAAAATGATTTTG 1332 30 100.0 35 .............................. TTTTTACCCCCTTTTTAGTAGTCCCAGGCGCCCGC 1267 30 100.0 36 .............................. TAAGTAGCCAGTCTAAAATGCACCGACTAACGAAAA 1201 30 100.0 37 .............................. GAGGACGCCCTGGAATGGGGCGTAAGACAAAGGGAAG 1134 30 100.0 38 .............................. GAAATAGTACAGCTAGCATTAGCAAGCTGTAGCGTATG 1066 30 100.0 37 .............................. AAATTCAATACTAGTTTATTGAGATACAATCCGTTCT 999 30 100.0 38 .............................. TATCTAGAATCGAATTAAGCAACCAAAACAGAGATAAT 931 30 100.0 37 .............................. TCACATTTCTTTTCCTCATTTTTAATAATATCTTGAA 864 30 100.0 36 .............................. TGTTGATCGGTTTTGTGTTTTTAATCGCTTCGTCAA 798 30 100.0 37 .............................. ATGAATCGGGGGGTCAAAATGAATAAACCAAAGATAG 731 30 100.0 38 .............................. AAATGCCCAAAATATCAATATAATATTGGAGGTTTTAA 663 30 100.0 38 .............................. TTGAAGAAGATGCCTGAGGCAAGAAGAGAACTGCATGA 595 30 100.0 38 .............................. TCTTGCTCAAGCTTCCGGTAAAACAAAAGCGGAAGTAC 527 30 100.0 40 .............................. GAGATAACCTAAGTCTTTTGCGATTTGCTCTAATAATTCA 457 30 100.0 38 .............................. CCAATTAACCCTATTATAAGCGTTGAAAAAACAGGTGA 389 30 100.0 35 .............................. CCGTACTGCTTTTCTGCCTCTGTGACCAGCGCTAG 324 30 100.0 37 .............................. TGCACTGTTGTGTACGATGTTGAGTTTGAACTCAGAG 257 30 100.0 36 .............................. ATGTATGAAAACAATCTATTATTTGCATAGCTATCT 191 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 75 30 100.0 37 GTTGATAGACTTCCTATGAGGAATTGAAAC # Left flank : ATACTCCTTATGTGTCCAGATGGTAAGGGGCTGATCTGATGTTTGTAATACTGGTATACGATGTAGAACAGAAAAGGGTTGCCAAGGTGCTGAAGACATGTAGGAAATACTTGTATTGGGTGCAGAATTCTGTTTTAGAGGGCGAAATTACAGAGGCAAATCTGGTGAAATTAAAAACAGAATTGGAGAAAATCATCCATAGGGATACAGATTCCATAATTATCTACAGATTTAGAACCACTCGATATTCAGCTATTGAAACTTTGGGGATTAAAAAAGGCGGGGAGGAAAACATCCTATAACTGTTAAATTATAAGAGAAAAGAAACACTAAGATGAATATAAAAATGTCGTCGATCCCCAATAATGTAAAAAAGCCTGGAGATCGACGACAAAGTATAAATGAACAAATCCGTGTTTTTCAACAATTACATTTTTTACTCGAACTTAACTTCAAATTATCTTAATTTGAATATCGGGTATTTTCAAGCTTTTTAATGG # Right flank : CCTTTTGTAAGGGCAATTTCATGCCCTTGTTTTTCGTGCGCCCGGCATGGGCAGTAACTTGGCGGTGAAAGTCCGCTATGGGCTTGGCAGTGGGAACCATTAGCCAAAGGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCCGGAGGCAAAGTCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATAGACTTCCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.10,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 995-163 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOEE01000088.1 Thermotalea metallivorans strain B2-1 AN619_contig000096, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 994 30 100.0 38 .............................. TTAGTTTATCTTCAACTTCGAACAAAATTAGCGTGAGT 926 30 100.0 38 .............................. CTGCCTCCGGACAGGTACATGGCTCCGGGCCGTATGGC 858 30 100.0 36 .............................. TCACCCAACTGCACAACATCTTCAAATATAATAGGA 792 30 100.0 36 .............................. ATCTCCTTTGCGCCGTCTGCGCTTGCTGTTCTAATT 726 30 100.0 38 .............................. CAACCTTACGGAATTTGAATATAAAAGCGATATAGACC 658 30 100.0 36 .............................. TATAAGGAGTTCGATTGTTGATAGACCTATGAGGAA 592 30 100.0 36 .............................. TTAAAAATGATTGAGCACGATGATTTTTTATATTAT 526 30 100.0 36 .............................. GCAGCCCGAAGAAGTAGGACTACCAGCACCGCCTAC 460 30 100.0 37 .............................. ACTGGTTTTGAAGATCCTTCTGAAGTTGATTGATCAC 393 30 100.0 36 .............................. TATTTCCTTGCAATGATGGAAAGATCAGCTATGTTG 327 30 100.0 38 .............................. ATAAATCTTTCCTTGTGTTACTATACGGATTCTTTAAT 259 30 100.0 37 .............................. CAGAAATAAGCATAAAAAAATATACAACATTTCAAAT 192 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 100.0 37 GTTGATAGACTTCCTATGAGGAATTGAAAC # Left flank : GGTTGAGCGGTTAAGCTTTAATATCCTTAAGACCTTTGTTTTAGCATAACCGGCGGCAATCCACTTATTAGCAATTTCTACTTTATCGTCTATCGATGGGTCGTTTTTTTTAAAAGATCTTCAAGTATGGCAATTTTTAAATCTTTATCACCTAGGAGCTTTTTTAAAGTCTCGTTTTCTGATTCAAGCATTCTCATTGCAGCAGTATGATCTTTGTATTCTTGGTTGACAGTTGGTTGCTTTTTAGGATTCTTAAACTCTCTTACCCATCTATTCAGCATGTTTTTATTTAAATCGTATTGTCTTGCAACTAAAGCAGCATTACCTGTTTCCATAGCTTCTTTAATAACTTTTTCCTTAAATTCCTTAGAGTATTTTCTTCTCGTCTTTGACATTTTTATTTCCCCCTCGACAATTTAATCTTAACATATTAAGATTCACTGTCCAAATACTTTAGGGGGCTAAATAGATCTTCAACTTCGAACAAAATTAGCGTGAGT # Right flank : CACACTTAAAAATACTAAATCAACTTTCGCACAAAGTTGATGTGCGATGAATATTGAAAAATCAATAGTTTTGGGCAATAAAAAAGTCCAAGAAGCCCCCTCTCTGTGATATAATAGAAGTGACAAAACCCCATTAAAATCAACGGTTGGGAGGTTCTTGAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATAGACTTCCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.10,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //