Array 1 11302-11570 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCR01000020.1 Enterobacter hormaechei subsp. oharae strain 152 E1 152E1_S94_R1__paired__contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11302 28 100.0 33 ............................ TCTTTTATTTTCGAGCATAGTCACGGCACAAAC 11363 28 100.0 32 ............................ GGAACCGCAAACAGAGAAGCGCCACCGCCGAC 11423 28 100.0 32 ............................ AGTGGTCGATGATTCGTGCACGCCACTGCTCT 11483 28 100.0 32 ............................ CTGAGCTTTGAAGGCGAAGTGCGCAAGAAGGA 11543 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 5 28 100.0 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTACTCTTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTGTTGATTTTATATGGTTGGGCTGAAGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCAGTTCACTGCCGTGCAGGCAGCTTAGAAACTCACAAACTATTGAGATGATTAACTGATGGAAGTTCACTGCCGTGCAGGCAGCTTAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGCAGGCAGCTTAGAAAGTAACCATCGCAATTCTTTAACCATTCTGGAA # Right flank : ATCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTGCCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGAGTTCCAAAGGCAAATGCGCTGGCCTGCACAGACAAAAAAGCCCGGTGGCGTTGATGCTTACCGGGCCTACAGGTGAACCGCGAAAGATTATGCGAGCACAAGATCGCCTTGCGGATGGCACGAACATGCCAGCACATAGCCCTCTGCAAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 27145-27952 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCR01000020.1 Enterobacter hormaechei subsp. oharae strain 152 E1 152E1_S94_R1__paired__contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 27145 28 100.0 32 ............................ AGGCTCATCAACTTTATTCGTTGCCTGGGTCA 27205 28 100.0 32 ............................ GGCTCGTCGCTGACTTCTTTGTCCCATACAGG 27265 28 100.0 32 ............................ GCTTGGCCTGACACATACTGTATTTAATCCTC 27325 28 100.0 32 ............................ CTGTGGTGTGCCTGGACGCTAATGGTCGCCTG 27385 28 100.0 32 ............................ ACGCCGGAAATGCTGTTATCAACGTAATTCTC 27445 28 100.0 32 ............................ AGCAAAACGAATCATTTCGATTAATTCTTGCT 27505 28 100.0 32 ............................ TGTCACTGGCGCAGAACGTAACTCCCCACGTA 27565 28 100.0 32 ............................ GGCCTTCGTGAGCGTGTTATCTGGATGATTCA 27625 28 96.4 32 .......A.................... GTGACGTTCCCGCAAATCATCTCCTGAAGCAT 27685 28 100.0 32 ............................ AAGCACGATCTCAATAATGTTCTCTCAGTGAT 27745 28 100.0 32 ............................ TGGGCGTAAGCAACTGCTGAAATGAAATCGTT 27805 28 100.0 32 ............................ GTTGCGCACTGAGAGACTGGCTCCGTCCATGC 27865 28 100.0 32 ............................ GCGAACGCCTGCCTGATTGACAGGCCACCCTC 27925 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 99.7 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGACAGATGTGGCTGCACCTGAATATGGAAAGCCTGTAATCCATATCATTAATTAAGTTTAGTGTCGCGCGTCGGGGAAGGGACTCCGGCGCGGTATGTCGCAACCATTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTATGAGAATAAAGGCCGCAGAAAAAATGGTTTTAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCAGTTCACTGCCGTGCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGCAGGCAGCTTAGAAACGGCTGCAATTAAGGCTAACAGTTATCTTCAG # Right flank : AAATGGCCTTATAGCGAGGACCATCAGCAGCCAGTTCACTGCCGTGCAGGCNNCAGGCAGCTTAGAAATGGAAATTGACAGCCGGGAAATTGAGATCACAGTTCACTGCCGTGCAGGCATCATACTCCCTAAATATTCACTCCAGCTATTTTAAAACCCACAATCATCACCACAATCCTCGTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTCCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGACATTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCTGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCTCGTCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 37955-38162 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCR01000020.1 Enterobacter hormaechei subsp. oharae strain 152 E1 152E1_S94_R1__paired__contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 37955 28 100.0 32 ............................ TTTACGTACTGCAATAAATTCGTCTTTTGTAA 38015 28 100.0 32 ............................ GATGACGGCACGACGGTCGCGATGTTTTTATA 38075 28 100.0 32 ............................ CATCTGAGTCAGTCGTGCGAGCTGACGTTCGC 38135 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGACCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGAGAGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGATATTTGACCCTAATTTTTGCCCAGAATGTAATGTATTGATTTTTAGATTAAAAATCCTGGGGTGTAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : ACGTATGGTGAACTCCGGTACCGAAGCGACCATGTGCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTACAGGCAGCTTAGAAAACGATTCCCGGTAGCCCTAAGCCCTGGAAATCGTGCACTGCCGTACAGGCAGCTTAGAAAGGCACGCTGTCGGCGGGCAGTTAGTTGAAGTCGTGCACTGCCGTACAGGCAGCTTAGAAAATTTCAAACTTTTCCCGGCCAACATGTATAACGTGCACTGCCGTACAGGCAGCTTAGAAATGACGGGCAGAAGTACACCGATACGCCGATCCCGTGCACTGCCGTACAGGCAGCTTAGAAAATACAGGGCTGCCGCTATAGTGCAAACCAATATGTGCACTGCCGTACAGGCAGCTTAGAAAAATCAACGTGAACTTTCATGGCGCAG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 38306-38997 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCR01000020.1 Enterobacter hormaechei subsp. oharae strain 152 E1 152E1_S94_R1__paired__contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 38306 28 71.4 32 NNNNNNNN.................... ACGATTCCCGGTAGCCCTAAGCCCTGGAAATC 38366 28 100.0 32 ............................ GGCACGCTGTCGGCGGGCAGTTAGTTGAAGTC 38426 28 100.0 32 ............................ ATTTCAAACTTTTCCCGGCCAACATGTATAAC 38486 28 100.0 33 ............................ TGACGGGCAGAAGTACACCGATACGCCGATCCC 38547 28 100.0 33 ............................ ATACAGGGCTGCCGCTATAGTGCAAACCAATAT 38608 28 100.0 32 ............................ AATCAACGTGAACTTTCATGGCGCAGAACTGT 38668 28 100.0 33 ............................ TGGCAACTCGATAACGGTGGTTTTACCACGCGC 38729 28 100.0 33 ............................ GACGTGAAAAACATCCACGAAGCCCGGTCTTTT 38790 28 100.0 32 ............................ TTCATTGTGATCATGCCAATCGGTGTATGGTT 38850 28 96.4 32 .........G.................. TGCCTGACTTCCTTCGACTGGGTGAAACGTTC 38910 28 100.0 32 ............................ AGCATCATTCCGCGGCGTGCCGTTCAAAGTCT 38970 28 71.4 0 ....................NNNNNNNN | ========== ====== ====== ====== ============================ ================================= ================== 12 28 94.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAAGAAGGATGATATTTGACCCTAATTTTTGCCCAGAATGTAATGTATTGATTTTTAGATTAAAAATCCTGGGGTGTAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCAGTGCACTGCCGTACAGGCAGCTTAGAAATTTACGTACTGCAATAAATTCGTCTTTTGTAAGTGCACTGCCGTACAGGCAGCTTAGAAAGATGACGGCACGACGGTCGCGATGTTTTTATAGTGCACTGCCGTACAGGCAGCTTAGAAACATCTGAGTCAGTCGTGCGAGCTGACGTTCGCGTGCACTGCCGTACAGGCAGCTTAGAAACGTATGGTGAACTCCGGTACCGAAGCGACCATGTGCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAAAGCCGCCTGTTTACCAGTGATGAAGATGCGTTCGTGCACTGCCGTACAGGCAGCTTAGAAATCGTTGCGGGTTGATCAGCATGTCGTCGATTGGTGCACTGCCGTACAGGCAGCTTAGAAATGTGAACTGAATGAGAACGCCGACGGCGTTAGCTGCACTGCCGTACAGGCAGCTCAGAAATTGTTGCTGATCACCCTCCCGTTGTCACCCGGGTACACTGCTGTACAGGCAGTTTAGAAACGTTGAGTTTCTCGAGCCACGGTTTTGACATTGTTCACTGCCGTACAGGCAGTTTTATAACATCCAACGCAGCAGCATTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAACCCGAAACCAAACCCGAAACCCAACCAATCGTTCAAATAATCGACTGTGCTAACAAAAAAATAAGGCCGGGAATATC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 5 39093-39361 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMCR01000020.1 Enterobacter hormaechei subsp. oharae strain 152 E1 152E1_S94_R1__paired__contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 39093 28 100.0 32 ............................ TCGTTGCGGGTTGATCAGCATGTCGTCGATTG 39153 28 100.0 32 ............................ TGTGAACTGAATGAGAACGCCGACGGCGTTAG 39213 28 92.9 32 C.....................C..... TTGTTGCTGATCACCCTCCCGTTGTCACCCGG 39273 28 89.3 32 ..A......T..........T....... CGTTGAGTTTCTCGAGCCACGGTTTTGACATT 39333 28 89.3 0 ..T.................T...T... | T [39353] ========== ====== ====== ====== ============================ ================================ ================== 5 28 94.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGTGCAAACCAATATGTGCACTGCCGTACAGGCAGCTTAGAAAAATCAACGTGAACTTTCATGGCGCAGAACTGTGTGCACTGCCGTACAGGCAGCTTAGAAATGGCAACTCGATAACGGTGGTTTTACCACGCGCGTGCACTGCCGTACAGGCAGCTTAGAAAGACGTGAAAAACATCCACGAAGCCCGGTCTTTTGTGCACTGCCGTACAGGCAGCTTAGAAATTCATTGTGATCATGCCAATCGGTGTATGGTTGTGCACTGCGGTACAGGCAGCTTAGAAATGCCTGACTTCCTTCGACTGGGTGAAACGTTCGTGCACTGCCGTACAGGCAGCTTAGAAAAGCATCATTCCGCGGCGTGCCGTTCAAAGTCTGTGCACTGCCGTACAGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAAAGCCGCCTGTTTACCAGTGATGAAGATGCGTTC # Right flank : CATCCAACGCAGCAGCATTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAACCCGAAACCAAACCCGAAACCCAACCAATCGTTCAAATAATCGACTGTGCTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGT # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //