Array 1 92076-85821 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLL01000009.1 Bifidobacterium asteroides strain ESL0200 Ga0133553_110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 92075 32 100.0 34 ................................ ACGTCGAATTGGAAGCTTTGCCACACATCCAGCA 92009 32 100.0 34 ................................ ATGACCCCTGAAGTCCATGCGGCCATCGACGTGA 91943 32 100.0 34 ................................ AAGGAGGGCATCGTGCCTGCTCTTGCGGAAGGTC 91877 32 100.0 33 ................................ TTTCGTTTGAGGATCAGATGTAAGATCAGTCGA 91812 32 100.0 34 ................................ CACGTTGACGGGTCGGCGCTCCTCTTCGCGGGGC 91746 32 100.0 33 ................................ ACAAGTAGCACTATCGCCGGTCATGGCGATAGT 91681 32 100.0 34 ................................ GCCTTCTACGGCCATTTCCGCGTCTGCCGGCTGT 91615 32 100.0 34 ................................ AAGGAGAAAAATGGTGGATCGGTCTTTGGGTCGC 91549 32 100.0 34 ................................ TTGGCGGTGCCATAGTCGGAAACAGCGTAGCCGT 91483 32 100.0 34 ................................ AATTGCCGAACGCTTACTCATCACTTACTGACGG 91417 32 100.0 34 ................................ ATGTTGGCCCAGCCGGTCTGAATTCCACCGGTAG 91351 32 100.0 34 ................................ AACTTCATCCCCGCCATGCCACCTGAACAGCCGC 91285 32 100.0 34 ................................ CCTCGCCAGCCTTGCCATTGGCCGACTGATTAGG 91219 32 100.0 34 ................................ TTGCTGTATCTGCTGAGGTGGCTGGCTCATGACG 91153 32 100.0 34 ................................ CTGATTAGCGTTACGTTTAAGCCATACAAGCTGA 91087 32 100.0 34 ................................ ACCGTGACCGCAGAATTCAAACCACAGCGACTCA 91021 32 100.0 35 ................................ CTGATTAGCGTTACGTTTAAGCCATACAAGCTGAC 90954 32 100.0 35 ................................ CTTAAGGACCCTGACCATCCTGACTACCGGTACTA 90887 32 100.0 34 ................................ TATTTCGCCGTCCGGATGGATGATGATGGCCCGG 90821 32 100.0 34 ................................ CCGCGGCACGGGGGATACGGTCGCGGTCAGCAAG 90755 32 100.0 37 ................................ ATCTAAACAGTTTTAACTTATCCACATTTTTGATGAT 90686 32 100.0 34 ................................ TACGGCGACGCGGCCACCTGGGCCAAGTACGCAA 90620 32 100.0 33 ................................ GTCTCCCGGCGCTGGTCAGCCTGGCTCATGGTG 90555 32 100.0 33 ................................ TATGCCGACCCCAGGTGGGCTGACAATCCGCGT 90490 32 100.0 35 ................................ ATATTTTCCGGCCGAAACATACTGGCGGGAAAAAT 90423 32 100.0 34 ................................ ATGTGCAACGCGGAGGCAACGGAGAGGCATCGCA 90357 32 100.0 34 ................................ ATCTCCTTGTACGTGTAATTTACGGCGACGGGCA 90291 32 100.0 35 ................................ ACATGGTGAATTTGTTCCCGGAGTATGCTCACCTT 90224 32 100.0 34 ................................ CTCTTTTGCAAAGCCCTGCCCGCCTACGCTCATC 90158 32 100.0 35 ................................ TCGGGATGCGAAGGCCCTGGATGATGCGAAGGCGG 90091 32 100.0 34 ................................ GTCAGGGAGTGTGATCCGCGCCTGCCCCTCGGCT 90025 32 100.0 34 ................................ AAATTCGCTTGCAAAAGTACGGTAATCCGGCAGT 89959 32 100.0 33 ................................ AAGAGGATCATCAGTTTTCGTTCATGGCTCCAA 89894 32 100.0 33 ................................ TGGCCAGGATAGACGACCTTGCCGTCCACGCTG 89829 32 100.0 36 ................................ CAAATCAGCCGTGCGAACGCTGCACAAGCCAACCAG 89761 32 100.0 34 ................................ GCGGAGAGCTGCTGCCTGAGCTGGATCAGGAGCG 89695 32 100.0 34 ................................ GCGGAAAAGGAACTCACCCAGGCGCAGACCATCT 89629 32 100.0 33 ................................ CAACATGGCACAGACTGTGATAAACGAGATCCA 89564 32 100.0 34 ................................ ATCAATGGAGGATCTATGCCCCTGGTGACAGCAG 89498 32 100.0 34 ................................ CACGCAGGCGAGTAACGCCGTCAAGGCTGTTTTT 89432 32 100.0 35 ................................ CGTCGTGGTAGGTTCCACCTGGGGTACGGGTCAGG 89365 32 100.0 34 ................................ CTGAGCGCGAAGCCTCCGGAGAACATGACCGATG 89299 32 100.0 35 ................................ CTTCCGGGCGGTGCGCAGCCCGCCGCGCCCGGCCA 89232 32 100.0 34 ................................ GTCTACTACACCAGGAAAACCGCTCTGGAACGGC 89166 32 100.0 33 ................................ TGGACAAGGAGCAGGCTAGGGCCCGTACCCCGT 89101 32 100.0 33 ................................ TGGATCGTACGCCTCTGCTGGTGTCCCGCAGGC 89036 32 100.0 34 ................................ TACCCTGGTTTCGAGGACTATGCGGGTCGCACGC 88970 32 100.0 35 ................................ CATGACCTTACGGATGTTCAGGCCGCGCACATGGC 88903 32 100.0 36 ................................ ATCGCCGCAGCCGACCCCAAGCCGGCGGCACCCAAG 88835 32 100.0 35 ................................ ACACTATCTTCACGAGTAGCACTATCGCCATACCG 88768 32 100.0 35 ................................ TCAGCCGTCGCCAGGGTGATGTAGTAGATGGTGCT 88701 32 100.0 35 ................................ TTTCTCGACCGAGCTCCTTGTACTGTGCATCCTTG 88634 32 100.0 34 ................................ TTCGATGACCGGCAAAGCCAGACCGGCTGTGGGC 88568 32 100.0 35 ................................ ATCTATCTCAGGCGCACGGATGTTGAGATCAAAGG 88501 32 100.0 36 ................................ CTTGTGATGTAGGAAATAATTTGTACCAAGGGAGAT 88433 32 100.0 34 ................................ ATCAAGACCAACACGCAGAATTCCCGTGTTGCTG 88367 32 100.0 35 ................................ CATGCACATTAGCGACTCAGGAGGAATCAAAAATC 88300 32 100.0 36 ................................ CAGAATTGAATTTATCTCTGTGATGATGACGTAAAT 88232 32 100.0 35 ................................ CCGACAAGCCCAAACTGCCAGTGCATCTACTGCAC 88165 32 100.0 35 ................................ CGGTAGCACCACGGGCACGCCCGTGAGCGTAGGTC 88098 32 100.0 33 ................................ ACATCCTGGGTGCAGACATCCTGGCAAAAAGTT 88033 32 100.0 34 ................................ TATCTCCTTTATCCTCAAAAATTTGTCGCCAGTC 87967 32 100.0 36 ................................ AGCATCAGCATGGAGACAGGCACGACGGTGGGGCAG 87899 32 100.0 33 ................................ GCCGAATGGCAGCAGGCAACCAGAAGGGCGGAC 87834 32 100.0 34 ................................ TGATTCAACGAGCCCGGCAGCTTTTCGGTTTGTA 87768 32 100.0 33 ................................ CACATGCGGCGCGTACGTCCCGTAAATTTCATC 87703 32 100.0 34 ................................ CTCGCCAACTCTGGTGAGCAAATGTCCACTGGTG 87637 32 100.0 35 ................................ AGACTGTTGAGCGTGCGGCAGTCCTCAACAAGACC 87570 32 100.0 34 ................................ CTGGTATCGACCTTTTTAAACTTCCCATACTCAA 87504 32 100.0 34 ................................ AGAAAGCCTACTCGTCTGGACGACCTGGACGAAT 87438 32 100.0 34 ................................ TGGGCTGTCGCCAGGGTGATGTAGTAGATAGTGC 87372 32 100.0 34 ................................ TGTAGCTCATGATATGTCCTCTCTATCGTCACTT 87306 32 100.0 34 ................................ ATTGTACGACCAAGGTAGAAAACGAACTGTTCTA 87240 32 100.0 33 ................................ GGAAACGTGCGCGTCCCTTACGCTAGATACCGT 87175 32 100.0 34 ................................ TGATGAACTGGCTCAGCGTGAATGGGCTGTTGCG 87109 32 100.0 34 ................................ AAACCTGTCCCTACGACAGCACCGGCCGCCCCGC 87043 32 100.0 34 ................................ GCTGACATACTGGTGGATTGTACCGTCTGCTCCT 86977 32 100.0 35 ................................ TTCAGCGGGGGAGCGGCAAAGCCGGCAGACGCGGA 86910 32 100.0 33 ................................ CACCAATCCATTTACGTCGTCCAAGAACCTATT 86845 32 100.0 34 ................................ CAGGGCAAAAAGAAAAGCGTCTCCGCCCATGCCG 86779 32 100.0 34 ................................ AAGAAGATCACAAGCATGTTTTCATGGCTCCCGC 86713 32 100.0 35 ................................ ATTGCGGACAACGGTTTGATTACTCTTACAAATAT 86646 32 100.0 34 ................................ GTGTTTGACTGTTGGAACGGGTTCCATGTCAGTT 86580 32 100.0 35 ................................ AATGCTGACCACGGAGACTATGAGGGTTTTTTCCG 86513 32 100.0 33 ................................ TTTGACAAGCTGAGCAAATTGTCTTGATAACTG 86448 32 100.0 35 ................................ ATGTGCGAGACTATCGATGATGAGGCCGGTATAGG 86381 32 100.0 34 ................................ CGGGGGGATCAAAAATCTTTGAACATAGTAGCCG 86315 32 96.9 34 ............................G... AAGAAAGTATATCGACACCCCGTTTACCACGCCA 86249 32 100.0 34 ................................ ACCACCGTGCCCCCATTGGACGTGGTGCGCACCT 86183 32 100.0 33 ................................ ACGACTACAATCGGCGACCCTCCTTATACAGCG 86118 32 96.9 34 ..................A............. ACGGTGAACGGCACCAGCATGGTCACCGGCAGGC 86052 32 100.0 34 ................................ CTTATGATGTAGAAAATAATTTGTACCAAGAGAG 85986 32 100.0 35 ................................ ATGACCGCCATAGCTCCCAGCAGCAGCAAGACCAT 85919 32 96.9 34 ......T......................... TGCAAAGGCAGACGGCGCTGGTCTCCAACACTTG 85853 32 90.6 0 ............G....G..........G... | G [85824] ========== ====== ====== ====== ================================ ===================================== ================== 95 32 99.8 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : ATCCATTATTACGGGGTGAGGCGGCATATTCCTGTTGACCAAGTGATGATGTTATAGAATCACTAGGCTTCGGTTGTACTGTATTGTTTGTGCCACGAAATTAGACGATGGCTGAGAGGTTAGTGTAATTCTGTAAACAGTGCAGTATGCTGACTGTTATTGTGAATTCTCAGTGGCGCGAAATGTTAGCAATCATATATCTGTCTGATCCTTCGCGCTACGAATTGTTGCTTCTATATGATATTCAGTCTTAATTTCGCATGTTTTAGAGAGCCGAGTTGTTTAAATTCTCAGGCAGAGGTCTGTAGATGCGAAGAAAGCTAGAATTTTAGTGAAACAGATGGACGGTTGTTTGATAATTAAATAGTGATGTTGTCGATTTGAGGCATTATCTCAATTGCTCGGCTAGAGACAGAATCCGTGTACGTAGGTTCGGCTGTAGGAACTCGCTTACTATTAAAAGATGACCATATATTGGTCAAGGGATGTATCATTGAGCA # Right flank : GCCACTACGTATGGTTCTCTGCCTGCGGTATACGCCCCCCGTAGAAGCCTGAATTGGAAAACCGATCATGCTACTCTGAATCACCCAGACAACACTGTTTTTTAGCGGGAACATGCATTAAAACTGTTCTTTCCCCAGAACTCCGTTAAGAATTGTATTCCTTCTAAACATGAGTATGAGTTGCTGCTCAGGTACAGTGTCAATCTTTTTATGCCATTCTCTTGTTCCTAGCTGCAAGAGTGCTGTGCTCCCTGCATTCGCGAGAACGATCCCAAGTAGTGACCGGGACTTTTCGTAGTATAGAAATACTACTGTCCCTCCCTGCAGATGCAGGGACAATCCTGCAGGGCATCGGATGGATGCACTCATGTTCGCAAAGATGAGAGGAGATGAATGGCTTTGGACGAGGATTTCATGAGAAAAATGGCAACTAAGGATAAGGCCTGTACCACTTATGACCGTATTCTCCAGAAGAGGATTGATGACTATACGTCAAAGTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //