Array 1 3787447-3786818 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021645.1 Pseudomonas psychrotolerans strain CS51 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3787446 28 100.0 32 ............................ TCTACGTCGTGGCCGCGCAGCTTTAGCTTGGG 3787386 28 100.0 32 ............................ TGGCGCTTCTCGTGCTGGAAGAAGAAGTAGTC 3787326 28 100.0 32 ............................ TGCGGCGTCTCCCTCAGCGAGGAGCAGGCGGC 3787266 28 100.0 32 ............................ CGAGAATGCCGAGCTTTACCGCCTGATCCTCG 3787206 28 100.0 32 ............................ TTGAAGAGCCGGCGGAATTTGCGGCGGACGTA 3787146 28 100.0 32 ............................ ATTCGCCGAGGCTGGGCGCGCTAATTCGAATC 3787086 28 96.4 32 ...........C................ GTAAGTCGGCCGTGGCTGCAACCGGATCGGTC 3787026 28 96.4 32 ...........C................ ATGGACTGATAGCCCTGGCCGAAGGACACCAG 3786966 28 100.0 32 ............................ AACCTGCGCGGTGCCGACCTGCGCGGTGCCAA 3786906 28 96.4 33 ...........C................ TACGCCATGATCAGCCGGGCCGATACCCTCGGT 3786845 28 75.0 0 ...........C.A.......AA.C.CC | ========== ====== ====== ====== ============================ ================================= ================== 11 28 96.7 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GCCACACCTTCGCCACCGACGCCCTGGCCCTGCATTACGCCCAACAGGCGATCGCTGCCGGCCTGGATCTACAGATCGAACCCGAGCTGCGCGCCTTCTTCTATCTGCCGTTCGAGCATTCCGAAGCCCTGGCCGATCAGCGCCGCTCTCTCGAATTGTTCGAGGCGCTAGGCATCGAGCACTACCGCAGCCATGCCCAGGCGCATCTGGACGTAATTGTCCGCTTCGGGCGCTTTCCACACCGTAACCGGGCGCTAGGGCGGATCAATACAGCGGAAGAGCAGACGTGGCTGGATGCAGGCGGCGGATTCTAAGCAGGCAGGGTTCAGGCTAGCGTCTGTCCGGTCTCGGTGGATGACGCTGCATTCATACCCTCTTTTTTGATACCCGCCTTACAACGATAAAAATCAATGACTTGGAAAAAGGCACGAAAAAAGGGTTTTGCGAGGAAAATCCGGTTAGTCTTCGATATATCAAGGCGTTATGCAGAAAACGCTCTA # Right flank : CGTATCTCTCTCGGCCTACCCGTTCCCCGCCCCATCCCGCCACTCCACCACCAGATCCGCCCGCGCCCTGTCCCCGTCGATCAACCGCGCATTGGGCTCATCGGTGCTCTCCACCCAGGCCTCGGCGTCCGCGCGGCTACGCCCGAAATGCATATGGCGTGCGACCAGGCGTTCGCGGCGCTCTTCGGGGTCGACGCGCACGTACCAGCATTCGTCGAACACCTCGGCCACATCGCTCCAGGGCGCCTGGGTCAGCAGCAGGTAGTTACCCTCGCTGATCACCAACTGGGTGTCGGCATGGACGGGAATGGCATTGGCGATGGGCTCTTCGATCTCGCGATTGAACAGCGGGGCATAGACGGTCTCGCCCGCTACCGGGTCTTTCAAACGCTGCAGCAGGGCGCGATAGCCGCGGGCGTCGAAGGTGTCCGGCGCGCCCTTGCGTTGGGCGCGGCCCAGGCGGGCCAGTTCGCGGTTGGCCAGGTGATAGCCGTCCATGG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3789498-3788989 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021645.1 Pseudomonas psychrotolerans strain CS51 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3789497 28 100.0 32 ............................ TTGTCGGCGGAGACGAACGCGGCGAGCTTGCC 3789437 28 100.0 32 ............................ TTTCCGGGGGCCGCTCTTCAGCTTCGCCCTGG 3789377 28 100.0 32 ............................ ATTTCGTCATCGGCATACTTGTGAAAACGGGT 3789317 28 100.0 32 ............................ GTCCCGGGCGCGCGCGTCTGGGTGCTCAACGG 3789257 28 100.0 33 ............................ TGGGAACGCAACTGCGGCGCCGCGCTGTATGAC 3789196 28 100.0 32 ............................ GTCCAGGAGGAGGCCCTGCTCGCCCTGGTCAG 3789136 28 96.4 32 ...........C................ AACCAGTAGAGCCGGTCTCGGATGTTCGGAGC 3789076 28 92.9 32 .............C...T.......... CGCATGCCATCTGGCGTACCGACCGAGTATCG 3789016 28 82.1 0 A..........C.C.......CC..... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 96.8 32 GTTCACTGCCGTGTAGGCAGCTTAGAAA # Left flank : GGCCCTGGACCGACTGCTGGCACTGGACTGGCTCACCGGCATGCGCGACCACCTGCACCTGGGGGCGCCGGCGCCAATACCGGCCCAGGTCCGCTGGCGCCAGGTCAACCGCGTCCAGGTGGACAGCAACCCGGACCGCCTCCGCCGCCGCCTGATGAAACGCCACGGCCTCAGCGAAGCAGAGGCGCGCCAGCGCATCCCCGACAGTGCCGCCAAACGCAGCACCCTGCCCTTCGTCACCCTGCGCAGCAGCGGCAACGGCCAACGCTTCCGCCTCTTCATCCGCCACGGTCCGCTGCTGGACGCGCCCCTCCCAGGGACCTTCAACCGCTACGGCCTGAGCACCACGGCCACCGTGCCCTGGTTTTGACCCTCTTTTTCGAGCACCTAAAAGCACCTTTTAAAATCAAGGGGTTACGAAGAGAGCAGAAAAAAGGGTTGGAGAGGGTAGTAGACCACCTAAGTCTTTGGAATCAAGGACTTGGGTGGTTTGGGGTCTA # Right flank : CCAGCACCCAAGACGGCTAAGCCTCCAGCGCCGCCAGCACATGCACGGGATCGTTCCTGAGCGCCACCAACAGGGCCTTCGCCGGGCCGGTGGGTTCGCGCCGGCTTTGCTCCCAGTTACGCAACGTACCGACGTCGATATTGAGCTTCCTGGCGAACTGCACCTGGCTAAGTCCGGTGCTCTTGCGGATTTGCTTGATCTGCAAGGCATCGACGTGGAACTCACGGGAAGGTTGCCGCTCACCCCGGACGATCTCGTCCATTTGGGTAACGCTTTCCATGAGGTCATCTAAGAACTTGGTCATGCTGTCTATCTCCACTTTTCGATCATGGCCTTCAAGGCTTTCCGGTCCTCGACTGAGAGGTCGTCCTTCTCGCTCTTGGGGTAGATCAGTAGCAGGGCAATGCGAGCATCGGCAGCGAAGTGATAGTAGATCACCCGAGAGCCGCCACGCTTGCCATGGCCACCGCTGGCGACACGGATCTTGCGTAGGCCACCGG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3798067-3798935 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021645.1 Pseudomonas psychrotolerans strain CS51 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3798067 28 100.0 32 ............................ AGTGGCAATGCCCGCTTGCCGAGGCTCCAGAA 3798127 28 100.0 32 ............................ GCAGAGCGTGAGCCCGCCACGCCGGCTGGCAA 3798187 28 100.0 32 ............................ AGGCCGGGGTCCTTGCGGTACCAGGGATCAAT 3798247 28 100.0 32 ............................ TGGGCGGACATCGCGTCGGGATCGACGAAGCC 3798307 28 100.0 32 ............................ TCGATGCGGCCGTCCTCATGCACAGAGATCTC 3798367 28 100.0 32 ............................ ACCAGGTTTCCCCCGGCAGTATCTGGCCGTGA 3798427 28 100.0 33 ............................ AACACCGGGGACCAGTCGGCAGCGACCAACACC 3798488 28 100.0 32 ............................ AGGCGCTGGAGATCGACCTGCCACAGCAGTCC 3798548 28 96.4 32 ............A............... AGCAACACCGGCTACCGCTCGGCGGCCAGCAA 3798608 28 92.9 33 ............A........C...... TTGTAGATCAGGCCGTCGATGGGCTGGGCCTCA 3798669 28 96.4 32 ............A............... ATGGATCAGCAACGTAAGGGCTTCGGCGTCTT 3798729 28 96.4 32 ...........C................ TCAACGCCGAGCAGTTGAAGGCGTTGCAAGAC 3798789 28 92.9 32 ...........C......G......... ATGGCCCGGCTGTTCTGGCGCGTCATCGACGG 3798849 28 96.4 32 ...........C................ TTGCAGAACTCCCCAAGCAGCCGCGCCACTCC 3798909 27 78.6 0 ...........CA.......-.CC...T | ========== ====== ====== ====== ============================ ================================= ================== 15 28 96.7 32 GTTCACTGCCGTGTAGGCAGCTTAGAAA # Left flank : GGCCACTTCCACATCCATCTCGTTGGCCGAATACAGCGGCGTGCCGCCACCGCCGCAGAAACCCACCAGCACACCCGCCCGAGCCAGCTCGCGCATCGCCGCCTGGGTGATGGAAGTCCCTGTGCCGAGCAGCAGGGTAGTGGTATTGGCGATGGGAATGTTCCAGTACAGCGACTGCTGGCCCGCCTCGGTCACGTACTCCACCCGGCCGCCGTTCACCAGCACGCGGCAGTGCTGCAGGTAGTAGAGATTGGCGCGCTTGGAATGCAGGATCGACTTGAGATCGGAAGGGCTGAAATCGTCCATGACAGCGTCCTTGATGTCGGTGGCGGGCTGGCCGTCATCTTGGCGTGGCGGGTGGCTGGGCGGAACCCTTTTTTTGCGGCGCTTGGTGGGGCCTTTGAAATCAAGGGGTTAGGGGAGGGGATAAAAAGAGGGTCAGGCGGCGAAAAAGCGGGTGGAAAGCTGTTGTATCAAGGGGTTGGGCGGGAAATACTCTA # Right flank : TAGTCCGCTTGCGAGCCAGTCGTCTCGACCGGCTTCCCTGCAATGCCACGGCCCGTGGCCGTTCCACGTGAAACCTACCCCCTACCCACATACGGCATCTTGGTCGCCATCACAGTCAGGGTCTGGACGTTGGCATCCAGCGGCAGACTGGCCATGTAGCGGACGGCGTCGGCCACGTGTTTGACATCCATGCGCGGCTCCACCGCGGTGCTGCCATCGGCCTGCAGGACACCATTGGCCATGCGCTCGGTCATCTCGGTGGCGGCGTTGCCGATGTCGATCTGGCCGCAGGCGATGTCGAAGGTGCGGCCGTCCAGGGCCAGGGCCTTGGTCAGGCCGGCGACGGCGTGCTTGGTGGCGGTGTAGGGCGCGCTGAAGGGTCTTGGCGTATGGGCGGAGATGGAGCCGTTGTTGATGATGCGGCCGCCGCGGGGCGACTGTTCGCGCATCAGGGCGAAGGCCGCGCGGCTGCAGAGGAAGACGCCGGTGAGGTTGGTGTT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 4802141-4802467 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021645.1 Pseudomonas psychrotolerans strain CS51 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4802141 28 100.0 32 ............................ ATCATGAGGCGCTCCCAGTCATCGTCTGATGC 4802201 28 100.0 32 ............................ TCCTCGCAGCCAGCGAGCGCGGCGATCTGCGC 4802261 28 96.4 32 .......................G.... ACGTAGGCTTGTTGTTCGCGGCTCCCATGAGG 4802321 28 100.0 32 ............................ TTCGCCATCTCCAGGCATTTTTTGATCTTTTC 4802381 28 96.4 32 ........................A... GCGCTCCGGCGCCCATCGGGACCTACGCCATA 4802441 27 78.6 0 ............AC.......-...CCT | ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.2 32 GTTCACTGCCGTGTAGGCAGCTTAGAAA # Left flank : CGCTACTACCTGGAACTGCGCATCACCGAAGGGCGCCGACTGTTGCAGCATTCCACCCTGTCGGTGCTGGAAGTGGCGGTGGCCTGCGGCTTCACCTCGGTCACCCACTTCAGCAAGAGGTATTCGGCCTACTTCGGCTATCCGCCGTCCAAGGAGCGGCGGCTGAAGTATTGAGCGCTGTTCTATGGTTGGCACGCCAGCGCTTGAGGTCATGACGCTGCTTCGCTTTGATTGAGCGCATGTTGCTCATCGAACCTGCTGGACTTGATGCGAACCCCTCTGGACCAGAGCGGGATGATTGCCTTAGGTGGCCGCTGGCCCCCTTGCTGCACCAGACCGCTACCACTCGGCTCGCCAGGCAGGGCTCTGACCCTCTTTTTTGGAGGCTACCGGCAGATCAATAAAATCAATGACTTAAGAAGGTGCCGAAAAAGAGGGTTGGGCCGGCGGAAATGCAGTGAAAGCCTGTTGCACCAAGGACTTGGGCGGGAAATACTCTA # Right flank : TTTCACCCCTTCTACGCTCGTGCTCTTCCACGCCAAGCCCCGCTGATCAAGGCTGCTGACCGCAGCTCGTCGGCACCGCCTGGCCTCGATCCGCATCGCGCTCCGCCGCATTCAGGCACAGCAACCCAGCTAGGGCGAACAGCAGGCCGAGCAGCATGCCCGGCGCCAAGGGTTCGTCAAAGCAGGCCCAGGCCCACAGCAGGGCCACCGGTGGGCTCAGATAGAGGGCACCGCTGACCGCCTGGGGGCTGCCTTGGCGTAGACACAGCCAGTAGAGGCCGTAGCCGAGCAGCGTCGGGATCAGCAGCCAGAGCACCGCCAGGGCGAAACCGGGGGTCAAGGGCGGGCGCAACGGACCTTCCAGGCCGGCCGCCACCGTCATCACCAGGCTGCTGGCAGCAAGCTGGATGAACAACAGTGTTGGCAGCGCCAGGTTGCTGGGCGGCAGGCGACTCTGCACCAGGGTTGCCAGGGCCAGTGCCAGGGCGCCGCCGAGGGGC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //