Array 1 44397-45730 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN389995.1 Capnocytophaga sp. oral taxon 329 str. F0087 Scaffold12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 44397 46 97.8 30 ............................................A. AACTTTCGTACGTTCTTGTTTGTGCTAAAA 44473 46 100.0 30 .............................................. ACTTTGTTTGCTCATCTCATTCATTTGTTG 44549 46 100.0 30 .............................................. AAAGTGTGCTTGAGGGTCCTCCACTGGGTA 44625 46 100.0 30 .............................................. TTTTTCAAATCAATACCAAATAGGTGACAG 44701 46 91.3 30 .................G.......G......C...........A. TCTTGTCCGGGTTTCATAAAGTTAGAAAAC 44777 46 93.5 30 ..........A.................C...............A. TTGTATCTCTTGTTGTTTGTTTAATGCTTT 44853 46 97.8 30 ..........................A................... CCAACCGACCAACGGGAGGGAGGGCGAGAG 44929 46 97.8 30 ................................C............. TCATCGGCAAAGGTTATAATGCCTAACGTA 45005 46 93.5 30 ................................C.........T.A. TATACTCGTCAAAAGGGCGTTCCAGCTTTT 45081 46 97.8 30 ............................................A. CCTAAATCCAAAGCCTTGTAAGATGTAGTT 45157 46 95.7 30 ................................C...........A. ACTTTGTTTTGCTGTTTCATTCATTTGTTG 45233 46 93.5 29 .......................A........C...........A. CTCAAGCAAAAACCCCTTCAAAAAAGCCT 45308 46 95.7 27 ..........................A.................A. AAACGCGATTATTGGAGTAAGCGGTTT 45381 46 95.7 30 ..............................AA.............. TAACGCTATCTATATGCTACAAGGCTGGCA 45457 46 100.0 30 .............................................. CCTCCCTCATTGTGTATAGCTACATAGCTC 45533 46 97.8 30 ............................................A. ATGGCAGTTCCCTCTACACATTAAGGACTG 45609 46 97.8 30 ............................................A. TATCAGGTTATTCAAAATAGGGAAGTCTTT 45685 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 18 46 97.0 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACATC # Left flank : AGATGGTTTAAAAGTAATTAGAATAAACGCATCTTCACTGTACATTCTGTATACTACAGATGGAAAGACCTGGATTGCTAACGCAAAAAGGTAATTAAGAGAAAAAGTATACTAAAAAGCCCCGAAATATATAATATTTCGGGGCTTTTTATTTCTCCTATTTCCTTATTACTTCTTTTTAAATATCAAATTTATTAAAAATAAAATAACAATAGCTCCAATAGCTCCTGTTAAGATAGAACCAATCAATCCTTCTCCAAGAGAGATGTGTAATACACTTCCTAGAAGCCAATACCCCACGCTACTCCCAAGAACACCAATAATGATATTCCCTATTAGTCCTAATCCACTACCTTTGTAGATAGTTCCTCCTAACCATCCTGCGATGGCGCCAATAATAAGTGTTGCAATAATTCCCATAAATTAAAAATTTAAATTAAAGTACAAAGATAAGAATTATTATATAATAAAACAAATTAAAACTTTTTTATGCAAAAAAA # Right flank : CCTCAATCTTTTAAAGATTTTAGTATCAATCAGTTTTACTTAAAAACAGCACTGAAAAACCTCCTCTTTTGCCTTATAAACAAAGGCAAAAGAGGAGGTTTTCTCTTTCCTATTCTTCTTAAAAAAGCTCTAATTGTACATAGGTTTCGGGGGCTGTTGTTTCCTTTTGGCAGTAGAAGAACTCCATATCGCCAAACTGCTTATCGGTTAGGCACATAATAGCTATATTGCCGTACTGTGGTAGGTTTTGTTTTACACGATTGATATGCACTTGGGCATTCTCCCTACTGGGGCAATGTCTTATGTACATCGAAAACTGAAAGAGCGTAAAGCCATCCTTTATAAGTTTATCACGAAAAACCTGTGCTTCTCTACGCATTTTTTTCGTTTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTATATCGTTCTGCTATGATCATAATTCAAGATAGACTATGAGTTGCTCATCTTTCCACTTTA # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.73%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //