Array 1 531550-531761 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEZX01000011.1 Escherichia albertii strain FCI-EC468 FCI-EC468contig0011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 531550 28 100.0 34 ............................ GGTATCCGCAATTTTCTCCCGTCTCGTAAAAGGG 531612 28 100.0 33 ............................ GACTATTCAGTACCAACTGACCCACGGGCAGAG 531673 28 100.0 33 ............................ GGCTGATTCTCGCGATAAATTACGCAACCGGGT 531734 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 4 28 100.0 34 GGGTTCTCCGCGTCAGCGGGGATAACCA # Left flank : CTGGATGAGCTATTGGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAAACTTCCACTCATTTATATTCTTTGTCGCCTCTGAAACTCCTCCATTTTGCCTATCCGGGACTAATCATTGCCATTCTCTACAAATTCTGTGGCGTTAATTCTTTGTTGGAATGAAAATTATTGCGGTAGAGTTTGGTAGATTTTAGTTTGTATAGAATCACTTTAAATATTTAACTTTTCACTCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTTTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGTTTATGTTTAGA # Right flank : ATTTAGGTATGTTCAGGCCGGGCAGTTTCCCGCCCGGTTTTCCTCATTTAGGCATTCGACCAGCTCTGGATTGAATCTGCATTCCCTAACTCACCATGCATCACTTCATACGATTTTTTCAGAATCACATCGGTGTGTTTGGTTAGGTCTTTGAAAATGCCTTTATTCATTGCGTCGTAGCGTTTGGCATTGCTCTCAACAGGCATAAAGACATCTTTCACGCGAACCATTTTGTCGACAGCCGTTGCGTAATCTGGATATAACCCCAGCCCTACCGCCGTATTGATCGCCGCTCCCAGGCTTGCACAGCCGTTAATGGCATTACGTCGTGCAGGAAGGTTGAATACATCGGCAAAAATCTGCATAAACAGATCGCTGTTCGAACCGCCGCCAGTAATGATTACATGCTTCGCAAAGTGATTCATTTCATTACACATATTGTCGTAATTATTCTTCAGCGTCAGCGCCACGCTTTCCAGAATCGAACGATAAATCCAAGC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTTCTCCGCGTCAGCGGGGATAACCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 606444-606056 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEZX01000007.1 Escherichia albertii strain FCI-EC468 FCI-EC468contig0007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 606443 28 100.0 32 ............................ ATTTTCAGAAAGTCAGTGAGCATAGGCATAAT 606383 28 100.0 32 ............................ CAGGAGATGATTGATACATCTGAGCGTATCAA 606323 28 100.0 32 ............................ TGAAGTGCATTGTGATCAGTGCGCTTCGGAGG 606263 28 100.0 32 ............................ GCAAGACGGGCGACAGGTTTTAACCGTTATAT 606203 28 100.0 32 ............................ GTACGGTGATGAATTGCTCCCTTGTCGAACTG 606143 28 100.0 32 ............................ AAGAGTTGGTCGAGACGCTATCATTATATATA 606083 28 85.7 0 ...........C........T..TC... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCATCCCCCCCCGGATGTGTGCAACATGCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTAAAAGATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCTGACCTCATAGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAATTTATATCGATTGATTCGTTTGGTTACGCAATGAACACACTATTTGCGTGACGGAGATTATGACCGTATGTGTTCTGGTCAATTGTTTATCAAAAGCTATGCAGAAAATATGAGATTGAGAAGTACCAGATTGCCCCTTTTTTAGGTTGAAATGTAACTTATTGATTTTGTTTATTGCTATTTTGAAGTCTGGAAAAAGGGTTTGAATCTGCGATTTTGTAAGTTTTAACGGTAAATCAATCTGATAGTCTGCTATTATTCCA # Right flank : CACAACACTCCATACTCCAATATTTATTCCCCATAACTCCCGGGCGCAAAAAAGGCCGGTTAAACCGACCTTTTATTCGTTCTTTCTCTTCGCCCGTCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTACGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTGTTAGGTAACGTTTCCAGTACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCATAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGTGCGCTAAATCGCAACAAACAGGTTTTGCACATAACTCCGAAAACACACGGCTAAGCCGCACCATAAGCGCAACATATAAGGGAGCGGTGAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 621452-620883 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEZX01000007.1 Escherichia albertii strain FCI-EC468 FCI-EC468contig0007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 621451 28 100.0 32 ............................ TTGATCTAAGTTATGCCACCAGCACACCAGAC 621391 28 100.0 32 ............................ TGATTGAACTTACAACGGTCATACTTGGTAAG 621331 28 100.0 32 ............................ CGCCAGTACTGGTGCCTGATGAAATGACCGAA 621271 28 100.0 32 ............................ TGTGATGGTGGTCATTCCTGGGAGTTAATGAG 621211 28 100.0 32 ............................ GGATTACCCTGGACAGCCAGGGATGTTAACAA 621151 28 100.0 32 ............................ AGGTACAAACGGCACATATTGGGACATGATGG 621091 28 100.0 32 ............................ GAAAGCAGGCTCAGTAAACAACAGATAACAGC 621031 28 100.0 32 ............................ GGATAACTCCAGCGTCAGTAAAGGATCAATTT 620971 28 100.0 32 ............................ TTTCAACGGACTTGCCATTATTCCCTTCAAGC 620911 28 96.4 0 ........................C... | C [620888] ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGTGTGATTCAGGATAACCTGAAAAAACCGCTCGCCAACGAGCTGCTGTTTGGCTCGCTGGTGGATGGCGGCCAGGTGACCGTTGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGCTTCCAAAGTGCGCAAAAGCATAAACCGGAAGCCGCGCATTAATCTGATGGCGAAAAAAATGCCTGATGCGCTGCGCTTATCAGGCCTACAAGGTTCGTGCAATCTATTGAATTTGCATGATTTTGTAGATTGGGTAAGGTGAATGTGCCGCATTCGACATAAACAAATCGCACGTTGTTAACAATCTGAGTCCGTAATCCTGTATGGGGTTACGGACTTTTTTTGCGCTTCGACGGAGCAGATGTGACCCTTTTTTGCGGGGGTGACGTAATTTATTGATAAAACTATGCGCAGGGATGTAGGGATAAAAAAGGGTCTGAGCGGGGGAGTATTGATAGTTTCGCTTTATTAACAACGGGCTAAGCGTGTAGTATCTGA # Right flank : TACGATGATGGCAGAAATTTAGCTGCGTTATGGCGTTCTCAACTCCGAACCATTAACTGTGGTGCACAATAACAATTGTGATAATTGCGATAAAAATCAATTTCTCACACAGAAATCAATGCTGTACTAACCCAACGCCTTCAAACAAAAATAATCACAGGATGTGTTTATGTCTTCCAATTACCTTACTCCATCTGACCTCAAAACCATTCTCCACTCTAAACGAGCCAATATTTATTATCTGGAAAAATGCCGGGTACAGGTGAATGGTGGGCGGGTGGAGTATGTTACCAGTGAGGGTAAGGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACAGCGTTGATGCTGGGAATGGGGACATCCGTGACTCAGGCGGCAATGCGTGAATTTGCTCATGCCGGGGTGATGGTGGGCTTTTGTGGTACTGATGGCACGCCGCTATATTCGGCAAATGAAGTGGATGTCGATGTCTCCTGGCTCAGTCCACAAAGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //