Array 1 9309-10435 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMCE01000067.1 Methylococcus capsulatus str. Texas = ATCC 19069 strain Texas contig0135, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9309 28 100.0 33 ............................ CGAAAAACTATATTAAAAACAAAGAGTTATAAT 9370 28 100.0 33 ............................ TCCTGAAAATGACATCGACGCCGACACGATGCG 9431 28 100.0 33 ............................ CAATGCCGCAGTGCGGGTGATCGGCTGGACCGG 9492 28 100.0 33 ............................ CAAAGCCGGAGCGGCGATCTGCGTCCAGTGCCA 9553 28 100.0 33 ............................ CGATCATGGGGTCGAGCAACCCGGAGACGGTGG 9614 28 100.0 33 ............................ CCTGCCCCTGGTCGTCACGACAACGAACCAGAC 9675 28 100.0 33 ............................ CCCTACCAGCGCGGAGCAGGCCGCTCTGTTGCT 9736 28 100.0 33 ............................ CGTCTTTGCTGCCGTTCCTGCTGATGTCACCGA 9797 28 100.0 33 ............................ TCACCTGCCGCTGCTGGATCGTGGTCTGGTATT 9858 28 100.0 33 ............................ TCCAGAGCTGCTACGTCAGATCGATGAGCTGAC 9919 28 100.0 33 ............................ TCTCAGGCGATTCTGATCCCTTATTTATCATAT 9980 28 100.0 33 ............................ CGGGAACAGCTCCGCCGCGACCTTGATCTTGAC 10041 28 100.0 33 ............................ CCATCGGACTCACGCCGCTCATGGCCCGTCCTC 10102 28 100.0 33 ............................ TCCCTCCGGTCCGGCGCCGGATTCAAGGGGATG 10163 28 100.0 33 ............................ TGTTCCGAACGACTGCCCCGATGGCAAGGTTCA 10224 28 100.0 33 ............................ CATCGACGGCAGCAAAGGCGGCAGCGTCTACGT 10285 28 100.0 33 ............................ CGTTCAAGCGGGCACGCCTCTGCATGCTCTTCA 10346 28 100.0 33 ............................ CGAGCGCAACGAGAAGGGAGAAAACACCATGGC 10407 28 100.0 0 ............................ | A [10432] ========== ====== ====== ====== ============================ ================================= ================== 19 28 100.0 33 GGCTCCCCCGCACACGCGGGGATAGACC # Left flank : CTTGCCACTGGCTTTCAGCGTCGCTAAGCGCGTGATGGACGATCCGTCTTTGCCATTGGAGAGGGCAGTACGCAAAGAAGCCGCCCGGCAGCTTCACAAGCAAAAAGTCATTCCGAAGATGATCGACCGCATCAAGGAGTTGCTGCATGTCGATGACGGTAATGGTGACGCGTAACGTCTCTCTCCGCATGCGCGGCTTTCTGGCATCCTCGATGCTTGAATTGGCCCCTGGTGTCTATAGCGCACCGCGCCTCTCGACTGCAGTCCGCGAGCGTATCTGGGCGGTGGTTGAGGATTGGTTCACTGCCGAGCAGGATGCCTCGGTCGTAATGGTTTGGGTCGATCCCGCAATGCCTGGCGGACAGAATGTCCGGACTCTCGGGCTGCCACCGGTTAAATTCGTTGAATTTGACGGAATAGTCCTGACTCGTCGACCTTAGGGTTTAGTGGATCTTTAACAGCCCGCTTTTTTGTTTTACCTCAAAGCGTTAGCCTATAGA # Right flank : CCGGCGGTGTCAAGGACGAAGTGCAATACCTGGTTCATTGAAGGAGCACAAGGAAGTCGAGCGAAGCGAACGAGTGCGACGTCCCCGCGAAGCCATAGGCCCGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACACGCGGGGATAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //