Array 1 177692-181080 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJEX01000003.1 Legionella pneumophila strain 2531STDY5467456, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 177692 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 177752 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 177812 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 177872 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 177932 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 177992 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 178052 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 178113 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 178173 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 178233 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 178293 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 178353 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 178413 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 178473 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 178533 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 178593 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 178653 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 178713 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 178773 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 178833 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 178893 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 178953 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 179013 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 179073 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 179133 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 179193 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 179253 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 179313 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 179373 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 179433 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 179493 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 179553 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 179613 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 179673 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 179733 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 179793 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 179853 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 179913 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 179973 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 180033 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 180093 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 180153 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 180213 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 180273 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 180333 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 180393 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 180453 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 180513 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 180573 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 180633 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 180693 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 180753 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 180813 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 180873 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 180933 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 180993 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 181053 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //