Array 1 32992-30186 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDBQ01000023.1 Aeromonas veronii bv. sobria strain LMG 13067, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 32991 32 100.0 33 ................................ CTGCGCACCATCGCCGACCAGAACCGATACAAC 32926 32 100.0 34 ................................ ATCGAGCTGCTGCAATGTGACGAGCTTAAAGGAG 32860 32 100.0 33 ................................ TCCATCAGACCAGACGCAACCCAACCGAGCGCC 32795 32 100.0 34 ................................ AGCTTGAGGAGTTGCGGGGTGATATGAAAGCCCT 32729 32 100.0 34 ................................ TCACCAAAATGGCGCCGATAAATGGCGTTATCGG 32663 32 100.0 35 ................................ ATGCCACCCCGCCCTGATGAGCGGTGCATATGGCC 32596 32 100.0 34 ................................ TGGCTAATCATGCTGCCAGCCTGTACGCCGTTAG 32530 32 100.0 35 ................................ ATCTTAACCGCAACGGTAGGCCGCATCTCAAACGA 32463 32 100.0 34 ................................ CCGCTTCCACCCGACCAGCGGCGGCAAGACTAAC 32397 32 100.0 35 ................................ CCTTTACCTGTTTAATCTCTGGAATAAAACAATGC 32330 32 100.0 35 ................................ CGGTAATCACACATGGCAACTGACGCACAAAGGCC 32263 32 100.0 35 ................................ ACCGCTACCAAGGCCGCAGAGGCGTTGAACTACCT 32196 32 100.0 34 ................................ AGTCTTGCGCACGCCGGGCACGACGTCGTGCGTG 32130 32 100.0 33 ................................ GATGATGACAACGGAACCCTGCATGTAGCCGCC 32065 32 100.0 33 ................................ CCTGTAGAGCCAACATTCCGCACTGTCACTGGC 32000 32 100.0 34 ................................ TCGCCCACCGAGTCGAGAAAGAAGTCATCCAGCT 31934 32 100.0 34 ................................ CAGGTGTTTCAGAAGCGGATGAGGCATTGCTCGA 31868 32 100.0 34 ................................ CTCCCAAGCGCCACCGTTCTTTGCTATGGCCTTT 31802 32 100.0 34 ................................ ATCTGCGATCGCCTGCCTCGCCGCGATGGCATCT 31736 32 100.0 34 ................................ AGCACATCCGGCTCGGGGATGCGGTCAATCTGCG 31670 32 100.0 34 ................................ TTGATGGGGATACCGCTGCCACACTTGAGGTGGC 31604 32 100.0 34 ................................ CGCAGGGCGCTTGCGTCCCGAGGACGTATGCCCC 31538 32 93.8 33 ...........C..A................. ATGACCACCAAGCCCACGGCGGTGATTGAGTTC 31473 32 96.9 34 ...........C.................... ATTTCAACGTGGGCTGATGACATACCAGCACCCT C [31461] 31406 32 96.9 33 ...........C.................... TCGATAAACTTGATGCCTCTGGCCGCATAGTCG 31341 32 96.9 33 ...........C.................... AGCCGTGACGGCGGCGGCCACGTGGGTTTCGTT 31276 32 100.0 34 ................................ TTCGATTGGCTGACCATTGAACAGGATGTCGGGT C [31265] 31209 32 90.6 34 ..........TC.....T.............. AAGGAGATTGACTTGCTTGGCCGCCAGTTGGAGC 31143 32 96.9 35 ...........C.................... ACTCGGGGCCTGGTCAAAGGTGATGCCGTTTGCCA 31076 32 93.8 33 .........T.C.................... TCCAAGAATGTGCTTGAACCAGCAGTTAAGGAA 31011 32 93.8 35 ...........CA................... ACATACTGCCCAGCGTGCGATCGCGCACCACAGCC 30944 32 100.0 34 ................................ AACAGTCCATCGAGCAGTATCACCTAAGTGGATC 30878 32 90.6 34 .........T.C.......T............ CCCGACAGCTGGTGGTTTGTCCCTGCAAACACCC 30812 31 96.9 33 ...........-.................... AAGACTTGTTCGCCCAAATTGAAGCGTATCGCC 30748 32 96.9 34 .........T...................... TCTTTCTCGGGCTGCGGAGCGCCACCAGTGCCAC 30682 32 96.9 34 ...........C.................... ACCGAGAGGCGAGCACATCGAGGCCCCTTGGCCT 30616 32 96.9 35 ...........C.................... TCGCTCTTGATGGCCTTGGCAACGGTCGGCCCGTA 30549 32 93.8 35 ...........C.......A............ AACAAGCCGATCATGGCGAGTTCGGCCCGCTACAA 30482 32 93.8 34 ...........C.T.................. ACCGTAGCCAAGATGCTCAACGCCGATCTTCTGG 30416 32 96.9 33 .............T.................. GTTGAGGACTACCTCGACGATGAAGATCGTAAG C [30405] 30350 32 93.8 35 .........T.C.................... ATGTTGACCAGGCGGAATCCCCACGCTTTGCACAG 30283 32 93.8 33 .......G.....T.................. AACATGACCCGCGCCTATACCTTGGCAGCACAG 30218 32 90.6 0 ........T..................A...T | T [30188] ========== ====== ====== ====== ================================ =================================== ================== 43 32 97.7 34 GTCGCGCCCCCTGCGGGCGCGTGGATTGAAAC # Left flank : CCCTATGTTCATCGGTGAGGTAGTACAGCCATGATGATATTGGTGACCTACGATGTTTCTCTGGAAGATCCTGACGGGCCTCGGCGTCTGCGCCATCTGGCAAAAATCTGTCTGGACTACGGTGTGCGCGTACAGTACTCGGTGTTTGAATGCGAAGTGGAACCAGATCAGTGGGTGCGGTTTCGGGATCAACTGTTAAAGACCTATGATCCGGATGTCGATAGCCTGCGTTTTTATCGTCTCGGAAAGGAATGGCGCAGCAAGGTGGAGCATCATGGCGCCAAACCCGCCCTCGATATCTTCAAGAGTGACCTGATTATCTGAACGCCAACCGCTAGTGCTCATTAAAAATCCGGAAGATTGGCAATTTTTTAACTAATTGATAAATAGCGATATATTGAAAGGCAGCCTTTCGGGATCGTCTATCTGTGATCCAACTGACATGGGTTGGCGCAGAATACCGTTTTCCGATAGGCGGTTTCTGTCTTTGCAAGAAGACG # Right flank : GGATGTGAGGCGGTGATGTGGTTAGATAGGATCTGGATATTCAAGGGGCCAATCTAGGATCATTGGTGCGCCTCACCTGAAAAAAGAAAAGGGTTCAGCAAGGCCGAAGGATAGCTTGGCTGAGCCCTTATTCGTTAGGCAAGTACTCCTCTCTCTGCCAGCGACACGATGCCTTCGCCGCCCACAACCAGATGATCCAGGGTTCGGATATCAACCAGAGCCAAAGCACTCTGCAGTCGCTGGGTTATTTCTATGTCTGCTCGGCTGGGTTCAGGGTGACCAGATGGGTGGTTATGCACCAGCATCAGGGCTGCCGCATTGAGCGCCAGCGCACGTTTAACTACTTCCCGTGGGTAGACGGAGGCACTGCTTAGCGTACCGCGAAACAGCTCCTCATATGCCAGGATCCGATGCTGGTTATCCAAAAACAGCATGGCAAATACTTCGTGCTCCCTACTCTGCAGCAGGGTTTGCAGCGCCTGTTGTGCTAAGTGTTTGTC # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.87, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCCTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.90,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [23-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //