Array 1 259052-259479 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVQS01000005.1 Bacillus safensis strain GBSW22 NODE_5_length_285986_cov_43.2138, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 259052 32 100.0 33 ................................ AATTTCTAAGAATGTATCAGCGCTTATAACGAA 259117 32 96.9 36 ...........C.................... TTCTCTGGCACTGTAATCGGTGTGACCTTTTTTCGT 259185 32 96.9 34 ...........C.................... TTTTTCGGCAATATGCTCTTTAATTTGATCACTT 259251 32 100.0 34 ................................ ATGCGTGTCAAAATGTGGACTGTCCTTGGTTATG 259317 32 100.0 34 ................................ ATGCTGTTTCCAAAGTCAATATTCATACGAGAAA 259383 32 93.8 33 ...........C.A.................. ACCCATGCAAAGCTTTTAATCAATCCCAGGGAA 259448 32 81.2 0 ...........C.A.......C.AT..T.... | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 95.5 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTTCTAATTTGTGTCGCACTCTACATGAGTGCGTGGATTGAAATATCATGGCGCTTATCAGTCGCTCATAGCATAGCCAGTCGCACTCTGCATGAGTGCTTAGCTATTCTTGATTTTAATAAGAGAAAAAAAGCATTTATGTTTGATCGAAAATTATTAGTTGAGTAACTACACTGATTAAAGTTTACTTTTCTTCAAAGATTGGGAGAAGAGTAGTCATTTTAGTTAATAAAGAAAAATGAAGACAATAAAATTAATTAGAATAGCTCTCCTCGGATATGTTAGAAGAACATTAAATCAAGATTAATGAATTAAAAACTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCACCTGGGGCATTCGCACCTTTTCATTCGATAAAAATGAGAAAAAATGTATATTTTTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTTGGCTATGATTCCCTAAAAACTGTTATAATTAGGGCGGAAATCGCA # Right flank : TGATTGTCTCTTAAACGGGTATGGCCACCTCAAATCCATCTTCTTACAATCTCCTCTTTCAAATAGCTATCAAATATACTGTTCATTTGTATAGTGAAAACATGACTCATTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTCGTAATGAATGGTGAAGGAGGAATTGGTTTGGGTGAAACGGAGCGAACCGGTAAAGTTGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAACCATGGAGGGCTGACAGGAGATTCTAGAGAAGTGATGTGGATGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATCGACTCAGATGGAAATCATTCTAACGAAGTCGATATTGCCGTTTTTGATGAGCAGT # Questionable array : NO Score: 8.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 267535-267831 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVQS01000005.1 Bacillus safensis strain GBSW22 NODE_5_length_285986_cov_43.2138, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 267535 32 96.9 35 ...........C.................... ATATGGATAGACCCATTCCCCTGTGTAATCGTCTA 267602 32 100.0 33 ................................ CCAATCCACATCATATTAGCCCAAATTTGAGTT 267667 32 100.0 34 ................................ ACTTGTGGGAGTGAACCTTTTTATTTTGCATTCA 267733 32 100.0 34 ................................ ATATCTCCGGCAGCATCAAAAAATGAAAATCCTT 267799 32 78.1 0 ...........C.......AA.A....C.C.G | C [267825] ========== ====== ====== ====== ================================ =================================== ================== 5 32 95.0 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTTGACGATCATTTCCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATAAAGTTAATAAACACTATCGTTTCCTCCATTTCGCGCACTCTATATGAGTGCGTCGATTGAAATCTAAACGCTCAATCACGAGCGATGGGTGAGCTGAGTCGCACTCTACATGAGTGGATGGATTAATAATTGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACAAAGTTCTATATAGAAACTTAAGGGTTTTGACGAGCATTTCCTGAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : GTTTCTTAAATTCAAGTACCTATCCAGTTCAAAATCTACACAAATGATTAATCAAAATAATGTACTTTTCCCCTAAATCCAAGCCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAGATCGCGACAAAAGGATAATGACCTTTGCTGCGGTAGCGTAAATCAATGAACCGCACCTCATAATGATCCTTGTATTTATCCACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAGGCTGAAATATTTTCATCTTGTTTGGCAATTTTCATAATTTCAGTATCAGGGACCGGCACCCGGTTAAACGTGTCTAAAATGACAACCTCTCCATTCATGCTGCGCCCAACATGGAAAGAGGATTTACATTTCACGGCAATGCGCCATTGTCTGAACTTCATTGTAGGCGAAATAAT # Questionable array : NO Score: 8.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //