Array 1 57480-55346 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN360734.1 Xanthomonas vasicola strain NCPPB 1396 scf_4605_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 57479 31 100.0 33 ............................... CCGGATGGGCTTGTGATGGCGTATATGCCTGCC 57415 31 100.0 34 ............................... TGCCCGCCTTGTACCTGGATGAGGAAATCTTGGA 57350 31 100.0 35 ............................... AGAAACATCTCCGCTGATTCCCGCGCAGCAGGCAA 57284 31 100.0 35 ............................... CGGCCTTGCAGCATACTTGCGGAGACACGAAGATA 57218 31 100.0 33 ............................... CCACACTGTGCGATCAAAGTAAGCTACCTCAAT 57154 31 100.0 41 ............................... CTAGGGGTGGATGAAGCACAGACCCTACCGCACGCATTGCT 57082 31 100.0 34 ............................... CTAGGGGGCATCGCCTGTGGGACGAACTTGTGGT 57017 31 100.0 35 ............................... ATTTATGCATGGCCTCTCTGTATGGCCCTGTGTCG 56951 31 100.0 36 ............................... TTTAGCCAGTTCACCATCGCCAAGCGTGGGCAAAAG 56884 31 100.0 33 ............................... AATGTCGGGGCAGGCAATTGGCGTAGTAGTACT 56820 31 100.0 35 ............................... CTGCGCCCGGGGGCTCTAGTCTCTCTACACGGCCC 56754 31 100.0 35 ............................... AGTGCATCCCACGCCTCTGCAATGGCGGACTTAAC 56688 31 100.0 34 ............................... AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA 56623 31 100.0 36 ............................... TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT 56556 31 100.0 34 ............................... TTCCAAGTCCACCTTGTCATAGCCATACCGATTC 56491 31 100.0 36 ............................... AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC 56424 31 100.0 34 ............................... CTGCAATACATTTTTGGACTTGGCTGGCGCAACC 56359 31 100.0 35 ............................... TTGACTCATGAGCACCGTGTGAGCGGTTTTATGTG 56293 31 100.0 34 ............................... TGTAGTCTCCCCGTCTTTTTGCGTACATGGGCTT 56228 31 100.0 34 ............................... TGTGTCACCTGTACCTCCTTCATCTCTAAGTTGA 56163 31 100.0 36 ............................... AACCGCACCGGAAGTGCCCGGGTAGGTGGTCGTGTC 56096 31 100.0 36 ............................... ACCTCCCGCCCGAACAAATCCCGCTGGATCAGGATG 56029 31 100.0 35 ............................... GCACCAAAGGCTATGGATGCCACCGTGGTGCAGTC 55963 31 100.0 34 ............................... CCGGTGACGCCACCGCCGATGCGTATTGTTAAAT 55898 31 100.0 34 ............................... TTTACATGCATCCCAAGAAGGGCCGAGGAGAAGC 55833 31 100.0 36 ............................... CGGGTCAGGCGGGACACTTGGGCTGTACCGGGATGG 55766 31 100.0 34 ............................... AGGTCCGCCTGCAAGGCACCCTGCGCCATCAGAA 55701 31 100.0 35 ............................... GTCAAACTCAATGTCAAGCCTGTAGTACATGCCTA 55635 31 100.0 34 ............................... AACTGGGGTAGTGCACCTCAGAAATCAGCACTGT 55570 31 100.0 34 ............................... CCAGACCGGGGCGGGCACATTACCCTCAATGTAG 55505 31 100.0 33 ............................... TCCTGAGGCGATCAGGTCGCTCGCTGACGCCTG 55441 31 100.0 34 ............................... CTGTCACTGACTCTTGCCCCCTGGCTACGCAGGA 55376 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ========================================= ================== 33 31 100.0 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : AAATGACGCGACTCAAGCCCCATGATGATTCTTGTCAGCTACGACGTCAGCACCAGTTCTCCCGGCGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAATTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCGCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAACAAAAAAATAAATAGACAGCGGATTCACGGGGCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGG # Right flank : CTGTTATTCAATACGGAAGTCAGGTTTTTGGTACTNNNNNNNNNNGCGCAACCGTCGCGCCCTCACGGGCGCGTGGATTGAAACTCCGAGGCACACATCACTGCAAAGCATTGCAGCGGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACGCGATCCAGCCATTTTTGTGTGCGGAACAGGTTGCGTCGCGCCCTCACGGGCGCGTGGATTGAAACGTGTCCTCCTACGGTAGTGCCGTCATCACAACGCTGGGTCGCGCCCTCACGGGCGCGTGGATTGAAACCAGCAGGGCAGCCAGTTGCAGGGCGCATACGGGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTGTAAGTGCAGAAGCCCGTAGAAAAATGTCCTTGTCGCGCCCTCACGGGCGCGTGGATTGAAACCTCCCACAGGCGATGCCCCTTAGGCACGTAAGTCGTCGCGCCCTCACGGGCGCGTGGATTGAAACCACCCGATGCTATTGTGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //