Array 1 234389-232434 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABANG010000005.1 Vibrio parahaemolyticus strain RZM-01 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 234388 28 100.0 32 ............................ AAATTGTTCGCCATACTCACCACATGCAAAGA 234328 28 100.0 32 ............................ GTGATAGCTGCATTGACTTCATGAACCGTTGT 234268 28 100.0 32 ............................ AAAACAAGCGCTACGTCACGTACGGTTATTTC 234208 28 100.0 32 ............................ ATTAATAGTAACAGTTCCAGTTAAAACATTAG 234148 28 100.0 32 ............................ CCGTTTTGTCATTTCTTAAGATACCGAAACCC 234088 28 100.0 32 ............................ TAACGACTCCGCCACCAATAGCAGAATAAGCG 234028 28 100.0 32 ............................ AAGAGCAAGCGGAAAGCGAACAGCCTAGCTCA 233968 28 100.0 32 ............................ AATGAAAAACACACTGAATAAACTCGTTGAAA 233908 28 100.0 32 ............................ CAATTGCAGCGTCGATATGTACTTGATCGTCG 233848 28 100.0 32 ............................ ACACATTAGCTTTGAGAAACGGAGTCGTAAAT 233788 28 100.0 33 ............................ TTTCATAGAATCACTCCTTTACCCAACTTTCAC 233727 28 100.0 32 ............................ TGACCATGAAATAAAAATCGAAATGGTAAATG 233667 28 100.0 32 ............................ TGGCACGCCGTACATAGGCATGATGCGGTCAG 233607 28 100.0 32 ............................ GTTACATGAAACATTAACTAAGGATAAGTTAT 233547 28 100.0 34 ............................ TTATCATATAACTTCCACCAACCGCTTTCTCTGT 233485 28 100.0 32 ............................ TACCGGAGATGGACAAACTTTCCGACGCTTCC 233425 28 100.0 32 ............................ AGACATTGAACAACTGGCAGAAGTTGGCGACT 233365 28 100.0 33 ............................ AAAGTAAACGATACGGAACAAAGAAATAATGAA 233304 28 100.0 32 ............................ AACCAATTTACTTGATGCCGATATTGATTCGA 233244 28 100.0 32 ............................ TACGCTTTAAACGGAGGTAATCCAATGAAAAA 233184 28 100.0 32 ............................ ATGACAATTGCGTTATAAATGGTCGTACCGTA 233124 28 100.0 32 ............................ TCGGACAAGCATTGCTGAGTGACACAGTTCAC 233064 28 100.0 32 ............................ TGTCGGCGGCTTTTGTCTTGCTCGCAAGCGAG 233004 28 100.0 32 ............................ TTTGCCAACGTGACGTTTTGTGCTTTATGAGA 232944 28 100.0 32 ............................ TTGTCGAACATCCGCGTTCCAACCGAGTTTAG 232884 28 100.0 32 ............................ ATGCTTACGTGGTTTCTAATGGCAGCAAATTT 232824 28 100.0 33 ............................ TGTAATTTTATCAAGTTGCTCAAACTGATAATA 232763 28 100.0 32 ............................ GAGTTCAAGTCGGAGGTCGGTCTAAGTAGTTA 232703 28 100.0 32 ............................ AACAATAGGCGCGTCACCAGAAAGTGACAACG 232643 28 96.4 32 ...........T................ GACAGACTGTGTTCCCAAATTGCTCATCAATC 232583 28 100.0 34 ............................ ATCATCGATTAGCGTTGAGCGCTATGTTGATTCA 232521 28 96.4 32 .............C.............. TGCCCGTTGTTGTAGCGTTGACCATGCATCTA 232461 28 89.3 0 ..........A..C............G. | ========== ====== ====== ====== ============================ ================================== ================== 33 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTCCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAATCCATAATTATTCATATTTAATTTAATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATTGCTTGGAAATAATCGATGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //