Array 1 40-193 **** Predicted by CRISPRDetect 2.4 *** >NZ_BADE01000368.1 Methylobacterium sp. B34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ============================= ================== 40 38 100.0 29 ...................................... CATGTTCATGGCTTGGTCCTCACAGGTTG 107 38 100.0 28 ...................................... TCGACACGGCTATTGGCATCCGAGCAGA 173 21 55.3 0 .....................----------------- | ========== ====== ====== ====== ====================================== ============================= ================== 3 38 85.1 29 AGTGTAGCCGATGGGGATCGGGGGTCCAGCCGCAACAT # Left flank : AGCCGCAACGACGCTGGGCGGCGCGAGCGGCGCGCTGACA # Right flank : | # Questionable array : NO Score: 4.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.25, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCCGATGGGGATCGGGGGTCCAGCCGCAACAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [13.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 1017-2324 **** Predicted by CRISPRDetect 2.4 *** >NZ_BADE01001443.1 Methylobacterium sp. B34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1017 35 89.2 37 .G...A.--............................ CTCCATTGAACACCGAGACCCCGGCCCGACAGCCGGG 1089 37 100.0 39 ..................................... ATGACGCCGTAATACTGGGCCATCTTCGCGCCCAGCACT 1165 37 100.0 37 ..................................... GTCATGGATGCAGTCCAAACGGTACGGGTGGAGACGG 1239 37 100.0 37 ..................................... AGGACGCGGCGGATCGTGGATGCGGACTCGCAAGAAT 1313 37 100.0 41 ..................................... ACCACGAAGGGGCCGTCGATCAGCGCCAGCGGCAGATCGGC 1391 37 100.0 39 ..................................... GCCGGCCGACCTCGGCCGCTTCCTGCGCGCCTGCGGCCT 1467 37 100.0 36 ..................................... AAGACCCCGGCCGATGGCGCGGTGATCGCCGCGGTG 1540 37 100.0 35 ..................................... GCTGCGGTGATCTCTGGGGTGTCGGTCACTGCTTC 1612 37 100.0 41 ..................................... TGCGTGATCTCCTGCTGCTGGATGACCAGCGCCTCATCGCC 1690 37 100.0 34 ..................................... GCAGCGGCTACCATCAGACCATCGTCGCCTCACC 1761 37 100.0 38 ..................................... AGCCGACAGTTCCGCCGTGGTCTGACGCTCTGCGGCAA 1836 37 100.0 39 ..................................... CACGCATCCTTCGGCCGCCGCAGCGTCGGACGAAGCCCG 1912 37 100.0 40 ..................................... GGGAACTACGGGCGGCGGCACCACCGCTGGTGTCGGAGAG 1989 37 100.0 39 ..................................... GGCTCGCCCGTGGCATAGGGATGTTCCGGGCCGGGCGCG 2065 37 100.0 38 ..................................... CGTTTAATATTTTTAGCGGTGGCAGCCGCACAGCATGG 2140 37 100.0 38 ..................................... AACCTGCGGGCGCTTGCGTGGCGCAGGCTGCCAACCGG 2215 37 100.0 36 ..................................... GCCGAGGACACGCACTGACCGTCGCGTCGCCCGTCG 2288 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 99.4 38 CCCTTCCTGGGCGGAAACGCCCAGGCCTCATTGAAGC # Left flank : CGAACGCCCCCTGACCGGCCAGCCCGCCGAGGACCGCCGCCGGATTCGCCAAGCGGAAGCCCGGCCCGTTCTCGATGAACTGGCCACCTTCCTCGACGCCGCCTTGGTGCGCATCCCCGGCAAGGGCGACCTGGCCAAGGCGATCCGCTACGCCCGCTCGCGCTGGACGGCACTGACGCGCTACGTGGACGACGGCCGGCTGGAGAACTCCAACAACGCCGCCGAACGAGCGATCAGGCCGCTGGCCATCGGAAGACGNCACTGGATGTTCGCCGGTTCCGACGCCGGCGGGGAGCGTGCCGCGGCGATTTATACCATCGTGGAATCCGCCAAACTCAACGGCCTCGATCCCCAGGCCTACCTGCGACATGTGCTCGACCGCATCGCGGATCACCCGATCAACCGAATCGCCGATCTCCTGCCCTGGAACCTCACGATTCCCGACCACGGGTGAACGGAAGCGGAGCCGTCAACCCAATTCCGCCGCAGTCGCCAGACGA # Right flank : AATGACGTGACATATCCTGACAACCAAGCGCCATATACGTCCCTTCCTGGGCGGAACGCCCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTCCTGGGCGGAAACGCCCAGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-17.30,-16.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //