Array 1 1317504-1318449 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP014159.1 Aerococcus christensenii strain CCUG28831 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
   1317504	    28	 100.0	    33	............................	TAAGGAGGGCGCTTATTTCATCAAAGCTTGTGT 	
   1317565	    28	 100.0	    34	............................	TAAGCCTCACCGTCAACGACAAAAACCCCAATTT	
   1317627	    28	 100.0	    33	............................	TGGGTAGCCAACCAAGTATACAAGCGTGGGGAT 	
   1317688	    28	 100.0	    33	............................	TAAGCCGAATAACCATGTATTTGACCGCCACTG 	
   1317749	    28	 100.0	    33	............................	CAGCAACACCAGATCGGACAGCCACTTATTATG 	
   1317810	    28	 100.0	    33	............................	TATTTATTCTCTTCCATAAATTTTGAAATATCT 	
   1317871	    28	 100.0	    33	............................	TTGGTTATTAGAGAAAGCAGATTCCCCGATACT 	
   1317932	    28	 100.0	    33	............................	TATTTTTCTATTTAGTCTTAGTCGATCAGTTGC 	
   1317993	    28	 100.0	    33	............................	CAGATCATACTTTTATGGTGATGAAGCGATTTG 	
   1318054	    28	 100.0	    33	............................	TGCGATGTCTCAAGTGGCAAATGATGTTTCAAG 	
   1318115	    28	 100.0	    33	............................	TGGTAGCAAGCGGTTTTTTCAAAGCGAAGATTT 	
   1318176	    28	 100.0	    33	............................	TGCCGCTGAAAGTGCTGGTAGTCGGATAAGTGG 	
   1318237	    28	 100.0	    34	............................	CAACATCTCTCCTTACATGCTGGCTGGCATATCC	
   1318299	    28	 100.0	    33	............................	TGGCTAAGAATAATCAAAACAAACAAATGACCG 	
   1318360	    28	 100.0	    34	............................	TTTAAAAGGTGCCAATTTAGAAGATGCCGATTTA	
   1318422	    28	  85.7	     0	...........A...........A..TT	|                                 	
==========	======	======	======	============================	==================================	==================
        16	    28	  99.1	    33	CTTTTTCCCGCGTATGCGGGGGTGATCC	                                  	       

# Left flank :   TTTGAAGTTAACCAAATCATTGAATTAGGTGCAGTTAAAGAAAAAAATGGTGTGCGAACGAGTTTTAATCAATTAATTAATCATGATAGAGAGTTGCCTAGTCATATAAAAGAACTTACTGGAATTACAGAGGAAATGTTAAGGAAAGAGGGAGTAAATTTAGAGGAAGCATTGAAGAAGTTGTTTGAATTTATCGGTGATCTACCGATAATAGGATACAATATAAATTTTGATATTAACTTTATTAATTACAATCTTATTCAACTGAATCATAATCCATTACATAATAAAACTTATGATGTCATGTCATATGTTAAACGAGAGAAATTATTTTTGAAGAATTATAAATTGGAGACGGTGCTAGCTAGCTACAATATAGAGGATAGAGTTCCACATCGAGCGTTGAAAGATGCAGAACTCATTGATAAACTCATAAATGAAGTGAATAAACTTCGGGATCTATTTGGAAATCAAGGTTGATATTATAGGGATTTTTTAGT
# Right flank :  TATACTAAGCATGTTATGGGATAGCAACACTTACTGTTTCTCCTTTCTTGAGATTAAATCTGGAATAATTTATAAACTGAAGATAGTGGAATAAGTTTGGCTTCTTTTTCTTTTGTATGTTCTTCTTAAAGTAGGCACTAAAAAAGTAAATCTACTTTAAGAAGATTTTTTTGTTCGAATAGAAAATCAGTTGCTAAAGAGTGATTTTGATATATTTATCTCTATGAAAAGTATGAACGATTTATTTAATCATATTATTAAAATATTTAGAGCATTTTTTTCGGATTTCGAATCTTGTATGAAGACTATTTCTTATAGTGAAATCTTTAAATAAAATTAAATACTATCCAATAAAAAATTTTAATTGTTAAAGATTTTCTAGCTACTAGTGTAAAAACCGCTTTAGATAACAGCAATTTTTTACAATAAGGTCTACTCATAAATTTAAAGTATAAAAAGTAAGATTCTTATAAAGTAATAATAATTATTAGTGTCAAAGC

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTTCCCGCGTATGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-9.90,-9.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//