Array 1 359847-360059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEAGG010000002.1 Streptomyces chrestomyceticus strain TBRC 1925 NODE_2_length_1372393_cov_38.804977, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 359847 30 100.0 31 .............................. CGTCGTCGTTCATGACCTCAGCGTGGATCTG 359908 30 93.3 31 ............................TC TGGCACGCACGCTCGGCAGTTCGCGCACGTG 359969 30 96.7 31 .............................G CTTTTCGGGGGCAGTTCGCTGTTCGGGTAGG 360030 30 70.0 0 ...........A..C......CC.CCAG.C | ========== ====== ====== ====== ============================== =============================== ================== 4 30 90.0 31 GTGGTCCCTGCGTGGGCAGGGGTGGTCCCT # Left flank : GGCGATGGCACGCTCGCCGAGCCGCTTCCCCGTACCGCTGAGGAACTCCACCCGCTCGGCGGGAAAGGAGTTCGCCACGACCGGACCGTGGGCACCGATGACGCGCAGCGCCTCCAGCCCGTTGGCGAAGACGACGAGGAACGCGCCGACGTCGTCCGCGCCGCTCGGGTACGCCTCGAAGACCTCCGCGTCGATGTCCGCCTTCTGCAGAGCCATCGCGGTCACCGCTCCCGCGATGCCCCCACCGATGATCAGAGCCTTGGTCATGCCGCGCCCCCAGGTGAGTCGGCCGCGGAGCGGAGGTCCGCTCCGCCATCGTCCACCTTGCCGGTGGTGGGCGGCGGGAGCCAGACCCCGTGCGCGGGGGTGTGCGTCATATCCATTGCGTCATGCAATTGCTGTCTGACATCGCGCGACCGGGTAGGGGCGGGTCAGCTCTGACGCCGGTAAAGCCGAGTAAAGTTGGCGGCTGACGGCTGGGGAGGCGCAGGTCGGGGGCT # Right flank : CGACGGGTGCCCTGCCTCTGTCCCGACAGAGGCAGGGCGCAGCGCCAGCAGCCGACCGCATCCCGTGGGAGGGCGCGACCCGCCCCGGCTCACCCCGCCGCGTACACGTCCTCCACATACCGCCCGGCGTCCGTCAGTTCCCGCAGCCAGGTCTCCGCCTGCTCCTCCGTGGCGCCCGTGCGAGCGGCGTGCAACTCGCGGAAGGCGGCGCGTACGCCCGGGGCCATCCGGCTGCCGTCGCCGCAGACGTAGACCCGGGCGCCGGCGTCCAGCAGTGCTCCGACCTCGTCGGCTTCGGCGGCGATGCGGTGCTGGACGTACCGGCAGTCGTCGACGGGCCGGGTGCTGAAGGCCGGGCGGAGGGACACCGCGCCGGCGGCCTCGGCGGTCCGCAGTTCGTCGGCGTGCAGGTAGTCGGCTTCGGGGGCGTCGCAGCCGAAGTAGAGGAGGGCGGGGGCGAGTCGGCCGGCGGTGGCCACGCGGTCCGCGATGGCGCCCCG # Questionable array : NO Score: 3.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCTGCGTGGGCAGGGGTGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGGGCGGGGGTGGTTCCG with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.40,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 969486-970123 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEAGG010000002.1 Streptomyces chrestomyceticus strain TBRC 1925 NODE_2_length_1372393_cov_38.804977, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 969486 29 100.0 32 ............................. GAGAACGCGCGGCTGGCGGCCGAGCTGGAGAA 969547 29 100.0 32 ............................. GAGAACGCGCGGCTGGCGGCCGAGCTGGAGAA 969608 29 100.0 32 ............................. AGCCACTCGATCGGGAAGGGATTTGCATACCA 969669 29 100.0 32 ............................. AGGTAGGCCCAGCCGCCGGGATCGACGCTGTA 969730 29 100.0 32 ............................. CCGATGACGCTGGCCGGTGTCGTCCTCGTGCT 969791 29 100.0 32 ............................. GCTTCTCCTGATCGGTGGCGCGCTGCGGCAGA 969852 29 100.0 32 ............................. GACGCCGCGGTGACTACCTCGCCGTGGGTGCC 969913 29 100.0 32 ............................. CGTGGCGGCCCGGTCGTAACCGTTGTGGTGCA 969974 29 100.0 32 ............................. AGCTCGTCGACCTCGGTACGGTCGGGCACCCC 970035 29 96.6 32 ........T.................... GACACCATCAGCATGAAGGTCGAGGGAATCCT 970096 28 86.2 0 .....................C.-.A..T | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.4 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : AGCACGATGTGGCTGTCGGCGTCGATGACGGGGTAGTCACGATGAGCGACCATGTACCACTCCTTCGGGAGATCCCGGGAAGGTCTGTCGGTCGGCGCACCCGGCCCGCGGACCCGCACACACGCACTCAGGCCGGTGCCGGCCGGCACGCCCGTACGGATGTCGTCCCCGCGTCCGAGACTCCGGACCATTGTTCCCGCCCCACGGGGAAAGGGAAGAGCGCCGTACGGGCAATGGGGGCTCAGGGGGTTCTGGCGTTACTTCTGCACCGTTGGTCTCTTGCGTGTGGGGGCACGGGGGGAGCGTGGGTGTGGGCGTGATTGGACTACGGGGCCGGGGGAGTCGATGTCATGGTCACCCAGCGAAGTAGGTTTAGTGCAGTCGATAACAGCCTTACTGAGGGAGCAAGCACGCTAGTTGACGGTTTGTCAGCTTTGCCGGAATGCTCGAAAGTAAGGAAAAACCACCGGTCCGCCTGACAAAGCCGCTGGTCGCGCCCT # Right flank : TAACCGCCCGACCACACTCAACCACCTCAGTCCAAACAGAACTCATTCCCCTCCGGATCGGCCATCACGATGAATCCGGCGCCCATCGGAGGAGCCGGCTCATGTCGACGCACCCGCGTGGCCCCCAAAGCAACGAGGCGGTCACACTCGGCCTCCAAGGCTGCCATCCGCTCATCGCCCTCCAACCCAGGAGCCGCACGGACGTCCAGGTGGACGCGGTTCTTGGCGGTCTTGTCCTCTGGCACCTGTTGGAAGAACAGGCGGGGGCCGTGTCCGTCCGGGTCCTCGATGGCGGACCTGGTGTTGCGCTGGTCCTCCGGTACGCCGATCCGCGCCAGGAAGTCTTCCCATGCGGCCAAGGGGTCGGCGCCCGCGGGCAGGTCGACTCCGGGTGGGCCGGGGTGGACGTAGCCCAGTGCGTCGCGCCAGAAGGACGACAGGGCGCGCGGGTCGTGGGCGTCGAAGGTGAGTTGGAGGTGGCGGCTCATCGGGGTGCTCCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 834851-835124 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEAGG010000001.1 Streptomyces chrestomyceticus strain TBRC 1925 NODE_1_length_1373236_cov_39.524368, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 834851 29 100.0 32 ............................. TTCGTCTTCGTCTTCTTCCGACGGGGACACCA 834912 29 100.0 32 ............................. AGTGGACATCGAGGCGGGGCCGGTCCGATACC 834973 29 96.6 32 .........................C... TGCATGGCGATCGGGTAGTCCCCGGACAGCGG 835034 29 93.1 32 .....................C..T.... AGGCCCTTGGTCTGGGAGAAGTGCGTCGTGTC 835095 29 79.3 0 .............AC.A.....C.TA... | C [835113] ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.8 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CTCTCGCATCACGCTGGCTTCCTTCGGGTGGGCGGACGGAGCGAAAGACACGCCTAACCGGCACCGGACCACTGAAACGCCTGTGCACTGGCCGGATCTCCTCAAGTGGGTCCCAGCCATAGTGCACTTACCGCGGCGACTTCAACGCCTGGACCCACACCCTGATACCCCTACGCGCCCCCGACAACTGGGAACACGCCTCCGCCCGCGCCAAGGCCCGCTCCGACAGCCTCACCAAAAACCCCGACCTGGACGTCTGATCCACAACCATCGAATCCCACCCCAACCCCACACGTCTCCCGCACCCTCGGGAACCTCATCGCTCCGAATCACATACGTTCCACCGGCGTCGACAACACGTGCTAGCGCTACCTGCCGGCAGTAGCGTGAGCAGGACACCGAACTTCCACTCGAAATGAACCTCACTAACTGAAATGTCGGACCCTGCAAAAGCGAGTAAGAATCCGCCCTTCGCCGGATGAATCCGCTGGTCGCGGCCT # Right flank : CCGTCTCGGCACCCCGCTGAACCTGATGTGGCTCATGTCGAGAGAGGAGCTGGTGCTTTGGGAGCTGGCGCGGCATCCGCTTCGGCCACCCGGGGCGCTGCGTCGCCTGCGTCGCGCCTTCATCCCCGTACGGCGCACCGCCCCCGCAGCAGCCTGACCGCGCCGCGCTGGCGAATCGTGTGACTACCGGTCGTACACGCGTCTTCGACGTACCTAGCAGGGGGTTCAGCAGTGGGCGACGACCAGCAACGTGCCCAACCGCTCCCCGTTCGGTGCTGCCAGGACGCGCGCGTCCGCACGGGTGAAGCCGGCCCGCTTGAGGTGGTCGGCCCAGGACTGGGGCGGGTACTGCCAGCGCGGTACGGTCAGCTCGCGCTCGCGGCCCTCCAGCCACTTTCCCCGCATGGCCTGTGGCCCGTACGCGCCAGGGGACGGCTCGGCCTGGGAGAACGCGAGCACGCCGCCGGGGGCCAGGCGGGCGGCGATGAGCGGGAGGAGCT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 444862-444652 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEAGG010000007.1 Streptomyces chrestomyceticus strain TBRC 1925 NODE_7_length_545906_cov_39.438339, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 444861 29 100.0 25 ............................. CGGCCCTTCGGCCGACCGGTGGGAA 444800 29 100.0 0 ............................. - Deletion [444772] 444776 28 69.0 8 -.......A........C..TT..AG.GT GTGCCGGT 444739 27 89.7 32 .............--...........T.. TCCACGTCCAGCTTGAACGTCGTCGCGCCGTC 444680 29 82.8 0 ......................GCCC.A. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 88.3 16 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GTCGCATGGGTACGCCTGCACCGGGCATGCCGACTCCGAGTACGCCGACAGGGGTTGCCGGCATCCGGGGCGCGACCATCACCACCGTCAACCGGCAGGCCGTACCGAAGAGCGGAGCGAAACGTGCATCGCGTACGGGTCATCGGCGGTGGGATCGCGGCACGGCAATCGCCCTGGCGCAGCCCGGCCCTTCGGACACAGTCACCGCGCCCGGCTTTCCGCTGCGTTCGATACGGCTTCTTGACGCCCGAGGAGGCGAGGTGGCGCACGCACGGATGGGAGAGGCCGAGGGCGCGATCCATGGGCCAGGAAGGTCTATCCTGCTCCACCGACCACAAGTCCAAGCCGCGAAACACCTTACCTTCGAATCAACGGCTTCTCCATCGAGGAAGAGCAGCGACTCAATGACCGAGAAAAGGACGTTTTCGCAGCGTTTGCCGGGATCTCCAGAAGTAAGGAAAAACCACCACCGCGCCTGACAAATCCGCTGGTCGAGGCCT # Right flank : GCCCCTTGCCCGCCCGGTAGTGGCGCCACCATCGCCGAACCAGTGCCGTGACGCAGACGGGCGGGCCCCGCACACAGCAGCCGCCCGCTCCCCCTAGAGCTCCCGCCGAAACGTCACCCGGTCCAACGCGGGACCGTCGTAATCCGTGATCGGATCCGACGGGATGAAGCCCAAGGCGCGGTGGAAGGCGATGGAGCGGGTGTTTTGCGGGGACGTGATGGCCTTGACCACGGTTCTGTTGTGGGCGCGGGCCATGGCGAAGAAGCGTTCGTACAGGAAGCTGCCCAGGCCGGTGCGGCGCCAGGCGGGGGCTACTCCCGTGAAGTGGATGTACGCCTCTTGCGGGTTGGACGGGGAGAGGAAGCCGATGACGAAGCCAGCCAGTTCGCCGTCGCGTTCGGCGATCAGGCTGGTTTCGTAGAAGTGGTTCACGAAGACTCGCGTCAGGTCGCGGGAGGCGGCGCGGCCCCACCAGTCGTCGACCACACTCACGATGGTGT # Questionable array : NO Score: 3.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:0, 6:0.25, 7:-1.66, 8:0.4, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.70,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //