Array 1 763-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKXR01000152.1 Staphylococcus felis strain F12 k127_418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 762 36 97.2 30 .........................A.......... CATACATGCATTTATATTCTTAGAGCGAAA 696 36 94.4 30 ........G.....G..................... ACAGACTACAGCAGATGATGAAATGAAGGT 630 36 97.2 30 ..............G..................... ATGAGCCAGTTTTGTTTGATGCGCCACTTA 564 36 94.4 30 ............C............A.......... GAAGCATAATGCTAGAACAGTAAAAGTGAT 498 36 94.4 30 .........................A.C........ TGGACAAATGACTAGTCTATTAAACGGTGG 432 36 100.0 30 .................................... ATAACGAAACATACACATATAAACTATTAC 366 36 100.0 29 .................................... TGTAACTGTAAGTTTTCTACTTGTAAAAT 301 36 100.0 29 .................................... CAAAAATACTATGGACGGCACGGACGAAT 236 36 100.0 29 .................................... AAAAAGGTAATCGCTCAATTCGAATTTAT 171 36 100.0 29 .................................... TATTAAAGACATACTAACTAAAGTGAAAG 106 36 97.2 30 ............C....................... TTACTTAACTTTTTTGTCAATGTTCTTTGA 40 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 97.9 30 GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Left flank : | # Right flank : CAAAT # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [6.7-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 759-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKXR01000100.1 Staphylococcus felis strain F12 k127_281, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 758 36 91.7 29 ...........G.......A.....A.......... ATAAGCATGTGACTAAGAAAAGAGGAATA 693 36 97.2 30 .........................A.......... GGTATTTAGAACGTGCATATAAAAATTGGG 627 36 100.0 30 .................................... ATATTTCACAGCGCGAGTGTCATTGATCGC 561 36 100.0 29 .................................... GGTCAAACAACTGTTGAATATGAAACTAG 496 36 100.0 30 .................................... ATTTTCAGTTCATTTTTCATCGGTGTTAGG 430 36 100.0 30 .................................... AAGATGACGCCTTTATCGTTTCTCAAGTAG 364 36 100.0 29 .................................... TTTGATAAATAATAATCTCCAACCGTTCA 299 36 100.0 30 .................................... TCTATGCGTTTTATAATACAAAAGATAAAT 233 36 100.0 29 .................................... GAAACGAGGGAAACCAATAGAAACGCAAC 168 36 100.0 30 .................................... GCAGAAAAATTAAAGGAAGAATTAGACGGT 102 36 97.2 30 .........................A.......... ATCGAAAGATGAAAAGGCACAAGTGTGTAG 36 36 97.2 0 .........................A.......... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.6 30 GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Left flank : AAGTGAAATTAACAAAAGAAAATTATTTATCGATTTACTTAAAGACGATGATAAAGAAAATGTATTACTTATATTGTATCCAGAAGCATTTTTGGGGCTCAAAGATATTCAAAGATTTATACAATTGATTAAAAGTTATCAACTCACAACCATTATAATTACAAATCATCCATCTATTATCATTGAGGAAGAAAATGTTTATTTATGCAAAAGCAATAAAGAGTGTCACTCAATCAAAGATATAAGGGAAGATCTAGAAATTCTTATGCCACAAGAAACAATTAATGACAAAACGGTTAGAATGATTGCTTATCATGAATTCATAGGTACAGATTTAAAAGAACTAGCACGATATTTTGAGTTTATTAATGATTACAATTAAGATATAATTGAATTTACTATGATAAATTAAAAACAACAAGCTTTATTCAATGTTTAACTTCTTAACTAAAAAGCTAAAACCTCAAAATGGTAAAAACTATAGTGTGTATTTTTGAATA # Right flank : C # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Alternate repeat : GTTTTAGAACTATGATTATTTAGAAAGAAGTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //