Array 1 3950-4878 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKNN01000106.1 Acinetobacter brisouii strain TUM15274 sequence106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3950 28 100.0 32 ............................ AGCTACAAATGCTAAATTAAACGTTGATACTA 4010 28 100.0 32 ............................ AATCTAATTGCTGTTGAAAGCGGGCAAGGCTC 4070 28 100.0 32 ............................ ACAAATCTTCGTCGCCACCAGTTTCATCGAAA 4130 28 100.0 32 ............................ TGTGACCCTCAACAACAAAAAGCGTTTAAAAG 4190 28 100.0 32 ............................ ATTAACAGATTCATCAGATAATGAAAATGTTT 4250 28 100.0 32 ............................ CATTTGACGAATCAAGTTATAAAACTGAAAAG 4310 28 100.0 32 ............................ ACTAAATGATGTTTTAAGTGTATCTGTTAACT 4370 28 100.0 32 ............................ TCATCGTCGAATGATTCATAATACAGATTTAA 4430 28 100.0 32 ............................ AATTATAAAAAGCGTCTTGCATTTCAGCTTGA 4490 28 100.0 33 ............................ ATGAAGTTTGTATTCAAGCCCTATGCATTAGCT 4551 28 100.0 32 ............................ AAATCCATGCACATGCAAAGATGGCAGCGGTA 4611 28 100.0 32 ............................ ATAATCTTGTATTTCATAATGTCACCATAGTA 4671 28 100.0 32 ............................ TTTTTAGGTTTAATTCTTCGAATATCTACAAT 4731 28 100.0 32 ............................ TCAGATTGATCAATCTGATTTACCTACCCCGA 4791 28 100.0 32 ............................ TATTCTCTCAGAAAATGCTGTTTCTTGGGGTT 4851 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 100.0 33 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AATATTCGTAAGTGGTTAGAACGCTTGGTTGACTATGTTCATGTTAGTTCTATACGTGAAGTGCCTGAGAGTAAAGTTACAGGTTATGCCATTTATAGACGTAAGCAATTTAAAACCAATGCTGAGCGTTTGGCACGTCATCGTGTAAAACGTGGTGATATTGGGTTTGATGAAGCACTCGCTCGGTATAGCCATGTCGTGAAGACCACCAACTTACCGTATATTGACATGTTGAGTTTAAGCACTTCAGATGAACAGGACAAAAAACGATTTAAATTGTTCATTGAAAAGAAACCTGCTGAAAAATCTGAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGAAGCATCTGTACCCGAATTTTAACCCAATATTTTTTGACTCTTTAACAGTTTAATAAAATCAATAAGTTATAATAGTGAGTGAAAACTTGGGTCTTTTGCTAGATTTTAGGTTTAACTCGCTGTTATGGCTTTATTTTTTGTGTTAATTTTATA # Right flank : TATATTATAAAAAGGGGTGCTTACTGCACTGCTGTCCCATAGTTTGCTTTAAATAAAAAAACCTGAGGCCTAACAGTTAAAATATGAGTGTAAACAAACACTTTAACGACCAGGATTCAGGTTTTGTCACATCAGAATACCGTATTTTATGAGCTAATTAAACCTGTTGTGCGACAGGATTTTGAACAACTTGCTAAAGTACACCATGTTGGACAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2142-494 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKNN01000137.1 Acinetobacter brisouii strain TUM15274 sequence137, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2141 28 100.0 32 ............................ GATAACAGGGGTTTTTTAATGTCTTTTTTCAT 2081 28 100.0 32 ............................ ACGACCTTTCTTTTTAAAATCTCTACAACGAT 2021 28 100.0 32 ............................ AGTCACGCGATTCATCAGCATTCTTTTCAATC 1961 28 100.0 32 ............................ ATTAAGTTTCCATCTGATGTGAAGTCAGACGG 1901 28 100.0 32 ............................ TTGACTTCGTATTTTCCTTTAAAGATTTGCGC 1841 28 100.0 32 ............................ CGAAAGAAATCGCAGATGGTGCAATTTACAAA 1781 28 100.0 32 ............................ TTGGGTTTGCTGAATCACATCCATTGCCAAGG 1721 28 100.0 32 ............................ TCGTTTGTATGAGATATACGTGATGTACAAGA 1661 28 100.0 32 ............................ ATCAAGGATTTGCTCTTTTGATGCGAGCTTCT 1601 28 100.0 32 ............................ GAGAAGCAAATAGAGTGACCGCTTGCCATGCC 1541 28 100.0 32 ............................ ACGACTTAAAATCTATTGAGTAGTAACTAGGA 1481 28 100.0 32 ............................ TTAGAATTGGTAAACCGAATATTCTGCGAAAT 1421 28 100.0 32 ............................ ATCACATATTTAAGATCATCAGGAGTACTTAA 1361 28 100.0 32 ............................ TTGCATAATGAAAGCAATTATTCTTGATACAG 1301 28 100.0 32 ............................ AATAGAGTCTATTCTGCGCTTTACTTCGATCT 1241 28 100.0 32 ............................ AAATGCATGGCACGTAATGGCGTAACGGGCTG 1181 28 100.0 32 ............................ ATCCATGTGGGTCACGACTTCTTTCAATGCAG 1121 28 100.0 32 ............................ TTTATCAAGCTGCTGAGAAGGGGGGTCGCTAA 1061 28 100.0 32 ............................ TGCTGTAATTCTTCGCCATATTTCATGGCTTC 1001 28 100.0 32 ............................ GTCACCATCAAAAGTTGCGCCGCCTTGCAGCG 941 28 100.0 32 ............................ GACTGACGATTGGATTACTTCGATTGTAGTTG 881 28 100.0 32 ............................ TGTCATACTAACATTTGGATCATTAACATTAT 821 28 100.0 32 ............................ AACTTCAGCAATAGCTATCACAAATGGGGTCG 761 28 100.0 32 ............................ AAAGCGAATCAGGCAATGTTTTGTCTTGGCGC 701 28 100.0 32 ............................ TTTTGTCGGCTATTATTGTTGGACTAAGTGCA 641 28 100.0 32 ............................ AACTTGATTGAGTTAAAGGTTGATGTATTTTT 581 28 100.0 32 ............................ ATAATAGCAAATAAAACAATAAAATAGTTTAT 521 28 82.1 0 .....................A..TTCG | ========== ====== ====== ====== ============================ ================================ ================== 28 28 99.4 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : CAATTCAGACACAAATCTGGATTGCGATGATCGCCTATTTATTGGTGAGTTTCGCTCAACATTTAGGGAAAACAGGTTGGACAGTTCAACGTTTACTCAGAATAATTCAAGTGAATTTGTTTGAAAGAAGAACTTTAAAAGCTTTATTTTCACCCGATAAAATACCCATAAAACAAGAGGAAGCTCAAATGAGCTTCCTCTTGTGAAAAATTGTGGGACAGCAATGGTGCTTACTGCCGTG # Right flank : GAATTTAGTGATGATATAGGGCAGTTATATCGTAAGCGTCCGCTGAGCCCCACTTTTTTTAACTCATTAATACCGCGATAGTGTCCACTAAAATTTAAGTGGACACCTATTTATGGATTTAAAGACAGTTATAGACACTGCACCAACGCTAAAAAAGCCCCGTCGAACCTTCACGGCTGAATTTAAACATCAACTTATTCAGCAATCCCAGCAGCCAGATACATCGGTGGCTAAGGTCGCAATGCAACATCAGATCAATGCCAATCTGTTGCATAAATGGATTCGTCAGTCCAGATCAATGGTTCCATCATTAACAATCTCATCCATTCCACAGACCGACTTCCTTCCCGTCATTCTTCACCCGACGCCAGTCAAACAAGAAGCACCTCCGCCACCTATACCAGAGAATAAAGCAGTTGCTCATATCAGGATTCCACTACGTGAGGAACAAGGTTCCGCAAGGGATCAGATGATCGAGATCGACTGGCCTGTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7712-14406 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKNN01000063.1 Acinetobacter brisouii strain TUM15274 sequence063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7712 28 100.0 32 ............................ AGTAAGCTGGCTTGTGCGTCCACTTTTTCGGT 7772 28 100.0 32 ............................ CAAGAGTTACTGAAGCAAAATAGCCTTTACAC 7832 28 100.0 33 ............................ AATCTTTGTAACTGTTAAGACGGTTGGCTTTTT 7893 28 100.0 32 ............................ AAAATAATCTTTGATCGTGCTTGCTCTCTGAT 7953 28 100.0 32 ............................ AATAAATAAGGTTAAAATTAACATAGTTACAA 8013 28 100.0 33 ............................ TTATGAACATGGAAAGGTCGCAGAAAAAGGAGT 8074 28 100.0 32 ............................ ATCCAAGAAAGTAAACAAGGTCAGGGAGTAAT 8134 28 100.0 32 ............................ ATTAAACCAATAACGATTATCAAGACTGCATA 8194 28 100.0 33 ............................ AATGATGATTTGATTTTCTGTCGTCATTCGTCA 8255 28 100.0 32 ............................ ATATTGGTCATAGAAGTAAGCGTAGTATTCAG 8315 28 100.0 32 ............................ ATTCATTAAAAACCCCGAAATAACATCAATGA 8375 28 100.0 32 ............................ TATAGACAATCGAATCAGATAAAACCCAAATT 8435 28 100.0 32 ............................ ACAATAAAATGCAATATTCACGGATACTTTAA 8495 28 100.0 32 ............................ CGTATTACTAACGGGGGTAACACCCGCCCATT 8555 28 100.0 32 ............................ TGTTCAGAATAAGCAGGATGTTCGTGCGCTTC 8615 28 100.0 31 ............................ GCTCGTGTTTTAACTGATCAATTGGATGCTA 8674 28 100.0 32 ............................ AGCATGCCACTGGTGACAGCTCGACTAAATTC 8734 28 100.0 33 ............................ GACATGATCAAAACACTCGACTGGGACGAATAC 8795 28 100.0 32 ............................ ACGCCAAGCAGGTGTGTGCGTTACTGGTTTAT 8855 28 100.0 32 ............................ ATTTCCCCATAAACCTTTATTCGGATCATAAG 8915 28 100.0 32 ............................ ATTGGGCAGATCACGCCAATCAAAAGGATTAT 8975 28 100.0 32 ............................ TGACAAAATTAATTTAGATAACTTGCTGACCT 9035 28 100.0 32 ............................ CACGACAAGGCATCCAAGTCACAGGTAAATAC 9095 28 100.0 32 ............................ AACCATTTTTGATATTAATCATTTGGTTAGCC 9155 28 100.0 32 ............................ AGTAATCCCAAATCGGAAAGCCTGATTCACCC 9215 28 100.0 33 ............................ AATAAAAAAGCCCTGTGTAGGGCTAGTTTAGCA 9276 28 100.0 32 ............................ CGATACTGAACTAATATCAATCCGATTGTCAT 9336 28 100.0 32 ............................ TTTTAAATATCCAAACTTAATTTCTTTTAGAA 9396 28 100.0 32 ............................ AAACAGTTCGAGAGATGGCAATAGCAATATCT 9456 28 100.0 32 ............................ CAAAGATTATGGATGCTAAAATCATTTTGGTT 9516 28 100.0 32 ............................ AGTAGTTTTGCGGTATGTTCTGCTTCTAGCTT 9576 28 100.0 32 ............................ ATACGGCTGCTATCTCCACAAAAATGGGTATC 9636 28 100.0 32 ............................ TCCAAGAGCGCGGTATTACAAACGACACGACG 9696 28 100.0 32 ............................ AACAGAGGCGGAAGCTATTAGACAAAAAAATA 9756 28 100.0 32 ............................ TTACCTTTCCCAAGATCCTGCACACGGACAAT 9816 28 100.0 32 ............................ TCTGTGTGAGCCAACAATGATAATTGAGTACG 9876 28 100.0 32 ............................ TGATGACTGGCGTGATTGTGAAGAATACAGCT 9936 28 100.0 32 ............................ TCTAAAAATAATAAAATCAGACATTTCTATTT 9996 28 100.0 32 ............................ AATCACGTAATTTAAAGGGAGCTTGTAGTCAG 10056 28 100.0 32 ............................ ACTGATCCTCATAATCTTTCAAATCCTTCTGC 10116 28 100.0 32 ............................ TAATGGGTATGATGCAAATAGTAATGGTGACT 10176 28 100.0 32 ............................ TGACAAAACTTTTTCTTTGTCTGACGAATCAG 10236 28 100.0 32 ............................ AGTTTGGAACGCGCTTACCAATGTGTCATATC 10296 28 100.0 32 ............................ GCAGGACAAGGTTTGGCAAGTGGCGTTAGCAA 10356 28 100.0 32 ............................ ACAGATGGCAGTCCGTGGGCTTTGAATCCTGT 10416 28 100.0 32 ............................ CCTTGAGCTTTCCACCAATCCATAGCCTGCTT 10476 28 100.0 32 ............................ TTCCGATGTTCTAGGTCTTATTTCATTATTAA 10536 28 100.0 32 ............................ AATCTTTTTTAGCGCCACGAGTCCAAAAAAGT 10596 28 100.0 32 ............................ TACTTGATAAGGAACAAACAAAAGAACATGGT 10656 28 100.0 32 ............................ ATTCTAAAAACCTCGTTACTAGTAGTAACAAT 10716 28 100.0 32 ............................ AGTTTCTCAAGCAATGTACACCCCTGCTCAGA 10776 28 100.0 32 ............................ ATTCGGGATGCTCTGTATCTATAGTGATAGAT 10836 28 100.0 33 ............................ ACGCGAGTGTGCAGTGTTAGTAATACTGCACAT 10897 28 100.0 32 ............................ AATTCAAAAATGCGTCTTCAGTTTGTTGCTGA 10957 28 100.0 32 ............................ TAGAATGAACAGTGTATGACATTGAAAGGATC 11017 28 100.0 32 ............................ GTGATCCATTAAATCGATTGCTTAAGATTGTT 11077 28 100.0 32 ............................ TTAGCGTTATTTTCAACTACCCATTCAGGAAG 11137 28 100.0 32 ............................ TGATAGAGAATATCAGCCAAAACTTACAAACA 11197 28 100.0 32 ............................ ACTTCGCTACGCTTGCTATAGAATAATGTACG 11257 28 100.0 32 ............................ AACACCAGTCGAGTCATATTGAATATAGGCAT 11317 28 100.0 32 ............................ TAAAATTTATTTTAAATATGATGAGATCAACT 11377 28 100.0 32 ............................ ACGTTATCTCGATATTCCAAAAATTGATGTCG 11437 28 100.0 32 ............................ ATCGGAGCTAAGTTTTTCTCGCCCCTTATACT 11497 28 100.0 32 ............................ CGTTTTGCAAGTCAGAACAAACATAAGTCGTC 11557 28 100.0 32 ............................ ATCTTATCAATATATCTATCAAAATAATTCTA 11617 28 100.0 32 ............................ AGTTGTCAATGTTAAGGCTGTTAAAGGTGATT 11677 28 100.0 32 ............................ TTATACTGCAAAAAATCAAATTGTTGTGCTTC 11737 28 100.0 32 ............................ AAGCGAATCAGGTGCAGCAAGTGAAACGCAGA 11797 28 100.0 33 ............................ CCATGGTTCCCGCACGTTCTTGATCTCGAACGC 11858 28 100.0 32 ............................ ATTGGTGGTTACATCCGTTTGAACCTTATCAC 11918 28 100.0 32 ............................ TGCTCAGCGATGGTTTTAGTGGCATTGGAATA 11978 28 100.0 32 ............................ TGTTTTTGGTTTGGTTGTTTTCCATAGCCACC 12038 28 100.0 32 ............................ AAGAAGTCATAGCTTCGCCAAATTCCCAAACT 12098 28 100.0 32 ............................ TTGTGGGTTGCTGCGGGCACTCCGATGCCTGT 12158 28 100.0 32 ............................ ATCATAAAGAGCTTGTCCATTAACTTAGCGAC 12218 28 100.0 32 ............................ TGAAGTTCGTGATTCATTACCAAATAATTTGA 12278 28 100.0 32 ............................ ACACAGACCAATGCCGCTCTAAGAACCAATCA 12338 28 100.0 32 ............................ TTGGTGATATACTTTAATTTCTTGCTGTATTT 12398 28 100.0 32 ............................ TTGCAAAACTGGTGCATTCGATGCACCACTAT 12458 28 100.0 32 ............................ TTATGACTATTTTACTTCACATTCTGTTTCTT 12518 28 100.0 32 ............................ TGAAGCACTCACATCGGTAACAGGGATTTCCG 12578 28 100.0 32 ............................ TTGAGCATCAAAAGACATAACAAGACCAGATA 12638 28 100.0 32 ............................ TAGAATATATATCTAAATTAGAAATGAGTGAT 12698 28 100.0 32 ............................ TACGGAGCGAATCCAAGCCATAACATCAAATT 12758 28 100.0 32 ............................ GTTCAACTGCTCAATCAGTAGAACAAATCTAT 12818 28 100.0 32 ............................ TCAGAGGGTGTTAATACTTGCCATACAATTGA 12878 28 92.9 32 C...........A............... ACTTGGAGTGACAACAAGCTGAATCTTTGTTT 12938 28 100.0 32 ............................ TCTGCCGTGTCTATATCCCAATTAGATGCAAC 12998 28 100.0 32 ............................ TCAAACAAATTATTCTCAGTCTGTTAGTTATA 13058 28 100.0 32 ............................ CATAACCCCCACGGAACCCAGTAACTTGTAAA 13118 28 100.0 32 ............................ ATTCGATATTTTGAGAAGTTATTCTGAAAATG 13178 28 100.0 32 ............................ AATGTCTAAAATATCCTCTTTTTTCTTAATTA 13238 28 100.0 32 ............................ AATCACACATAATTATTCTGCATCCGATTCAA 13298 28 100.0 32 ............................ TTGTCGATATTGCCTGACTGAAAAGCCACAAC 13358 28 100.0 32 ............................ AACACATGAAGAACAACAGGCAGCCAAGTCGT 13418 28 100.0 32 ............................ ATTGATAAGTCGCATCATCAAGATTGGCTTTA 13478 28 100.0 33 ............................ GATTGATGTCACTAATAATGGCGCTATTCAGGA 13539 28 100.0 32 ............................ TATCTGATTTTTCAGAAAAAGATCAAAAATGG 13599 28 100.0 32 ............................ TTAATTATCAAGAAAAGCAAAAAGCAAAATTT 13659 28 100.0 32 ............................ TCTACACAATTTACAGGATTTCTATGTCCAAT 13719 28 100.0 32 ............................ GTCCTGGTCAATATGGTAATGGCAGTCGCTAT 13779 28 100.0 32 ............................ GTTAATCGCCTTGCTATTCATACGATCAAACA 13839 28 100.0 32 ............................ ATTTTGATCGCAAGTGCAGACATAACACCGCC 13899 28 100.0 32 ............................ AGTAAAGGGTTACAGCGTGTTCATGAATTTAT 13959 28 100.0 32 ............................ ACTCTGCGCCATAACCGCGCTGATGTGCTGTA 14019 28 100.0 32 ............................ ATTGAATAATGAGTGCTAGATCAGGCACAAGT 14079 28 100.0 32 ............................ CTAAGACCCAAAAAAGCCCACCGAAGTGAGCT 14139 28 100.0 32 ............................ ACCAATGTAAGAACCAACAGCATTTTGAGCTT 14199 28 100.0 32 ............................ GTGCAAAAGCAATGCTCGACCAATATCCAAAA 14259 28 100.0 32 ............................ AGACACGAGCAGCATCCATCCCGAATTTACGT 14319 28 100.0 32 ............................ TGCGTTCTTCACGTATCAAACTGGAGCAGGAT 14379 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 112 28 99.9 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AAGAGTTTTGCATCGAGAATTTCGTTATCGGCTGCCCAGTCTAAAGACAAGGTTTGTAATACCAACGCTGAGCTTTCTGCAAAAAAGTCTTCTGTGCCTTGCCCTAAATGAGCATCGTATTGACGCAGTGCTGTGACCCCAAAGCGAATAAAATCACGAATCGTGCTTAAGTTTTCAGCCGCTTCATTTAAACTTTCAGGGCTAATCGTCAATCGCTCCACTCAGAACTCCAAATCTATAAATTTATATGCTCGGTATTCTACCCTGTTTTAGCGTGATTTTTAATGCTTATAGCGTCTTTGGGCAAATGATCCTCTCGATCAATGTAAATTTTATGTATTTTTTAATTTGACAGATCATGACTTTTGACCCAATATTTTTAGACTCTTTAACAGTTTAATAAAATCAAATAGTTATAACTCGGCTAAAAAATTTGGGTCTTTTGGGATTTTTTATATTTAAGCCTTTGTTATTTCTATTTTTATGATAATATTTTTACT # Right flank : GGGATGATGTGTGCTGAATTAGCAGGAGACTTTCACTTGGGAGATTCTAGGCAGCTAACCGATAAAAGTCTTCTGCCATTTGATTTGGTGTCTTAAAATCCAAGCCTTTTTGAATTCTTCGTTGATTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //