Array 1 45793-44041 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALTE01000014.1 Streptococcus agalactiae GB00241 ctg7180000002951, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45792 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 45726 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 45660 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 45594 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 45528 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 45462 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 45396 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 45330 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 45264 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 45198 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 45132 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 45066 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 45000 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 44934 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 44868 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 44802 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 44736 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 44670 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 44604 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 44538 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 44472 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 44406 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 44340 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 44274 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 44208 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 44142 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 44076 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //