Array 1 158222-154833 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJER01000002.1 Legionella pneumophila strain 2531STDY5467463, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 158221 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 158161 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 158101 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 158041 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 157981 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 157921 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 157861 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 157800 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 157740 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 157680 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 157620 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 157560 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 157500 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 157440 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 157380 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 157320 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 157260 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 157200 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 157140 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 157080 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 157020 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 156960 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 156900 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 156840 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 156780 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 156720 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 156660 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 156600 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 156540 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 156480 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 156420 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 156360 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 156300 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 156240 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 156180 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 156120 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 156060 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 156000 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 155940 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 155880 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 155820 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 155760 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 155700 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 155640 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 155580 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 155520 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 155460 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 155400 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 155340 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 155280 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 155220 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 155160 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 155100 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 155040 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 154980 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 154920 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 154860 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //