Array 1 25672-24184 **** Predicted by CRISPRDetect 2.4 *** >NZ_FEUT01000029.1 Neisseria meningitidis strain 2842STDY5881220, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25671 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 25605 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 25539 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 25473 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 25407 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 25341 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 25275 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 25209 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25143 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 25077 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 25011 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 24945 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 24879 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 24813 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 24747 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 24681 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 24615 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 24549 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 24483 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 24417 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 24351 36 100.0 30 .................................... TGTCTTGTTTTTCAAAGGACTGCATCAGCG 24285 36 100.0 30 .................................... CTGCTCTCCCAATGCGCGATGTCCAAACCG 24219 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //