Array 1 35325-34042 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHQD01000001.1 Acetobacter pomorum strain CS_004_W120 NODE_1_length_338513_cov_17.165878, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 35324 32 100.0 34 ................................ CTTTGGAGGTGTCGTATTACATCGGGTGATGGTT 35258 32 100.0 34 ................................ GTCATAGCGCCGGTGCGAGGATCACGCACTACCG 35192 32 100.0 34 ................................ GCGTAACGGTGCGCCCGCTCTAGCTTGTGAAGTC 35126 32 100.0 33 ................................ TGTGCAACTAATTCCGCCGCCTCAAAATCTTTA 35061 32 100.0 34 ................................ ACAAGCCACGCCTTATCTATGGCTTTGCCTGGGA 34995 32 100.0 34 ................................ CGTGCAATAATACTGGCCGGCAACATAACGCCAG 34929 32 100.0 33 ................................ ATGCGTTACGGTTTAACGCGATCAGAATAGAGG 34864 32 100.0 33 ................................ GGTAATCTGGTTCCATACATTGCGCGGTGTTAT 34799 32 100.0 33 ................................ GTTTTTGGATTTAGTGGCGTTTCGGGCAGGTTG 34734 32 100.0 35 ................................ AGGGGGCTGGGCGAGATCCCAACCTGAAATCAGAA 34667 32 100.0 33 ................................ CACCGAAGACCGGGACAACTTCGTGAAAGGCAT 34602 32 100.0 34 ................................ CTCGTGCTGGATGTTAAGGGGCTGCATCATGACC 34536 32 100.0 35 ................................ ACCGTATCGAGTGGCGGTACAGGCTACGCCGTGGC 34469 32 100.0 34 ................................ CAATGTGAACATCCTTGGGTACTCGTTAGATCGG 34403 32 96.9 34 ........T....................... TGGAGCGCTTGTAATTTCCAGCAACCATGATGGC 34337 32 100.0 34 ................................ GGGTCTATCCCCTGCCGGAGCAAATCTTTAGCAT 34271 32 100.0 34 ................................ GTGGTGCCCGCAACGGATACGATATAGAGATCGC 34205 32 100.0 33 ................................ CCGCTCTACTACAAAGATCGTTGGGTGCTATTT 34140 32 100.0 35 ................................ ATACAGTGCAGTGATGGCGGCAGGCCCATCCGAGA 34073 32 87.5 0 ............................CCGA | ========== ====== ====== ====== ================================ =================================== ================== 20 32 99.2 34 GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Left flank : CGGGTTGCGCGTGCGTGCCTCGATTATGGTCAGCGTGTTCAGCATTCTGTTTTTGAATGTGAGGTCGATCCGGCGCAATGGGCAGAATTGCGCGCGCGCCTTCTTGATGAAGCTGATTCTGCAAAAGATAGCCTGCGCTTTTATCAACTTGGTGCTAAAGGGCGTCAACGTGTAGAGCATGTAGGGGCAAAACCAGTACTGGACCTTGATGGCACGCTTGTTTTTTGAAACCTGAACATTCCTGCAAATAACCAGTGGCAAGCGGTTTCTGAGCGATATTTTCAGATAGAATAACCGAAGTTATTTTGCCGATCAGAGTATCTGCGCGAACTGTGATCGGCTGGTGAAATCCGGGGAGGATCGCGCACTTCGTAACATATTGAAAAACAAAAGAAATATTTGGACCTTTGGTGTGCTGGTGTTGTGATGTGACTTCAATCGACAGGGTTCGCGCAGAACACATGGTTTTTCCCGTCATAATCAGTTAACAAAATAGCGGG # Right flank : GTTCATCACGGATTACGAGATCGAGGCGCAGGAGACGGTCTGCGATCTGCCCCATGTGTAGTGGTGGTATGTTGTGTGTGCCATGCCTGCGAACAAAACAACGCCTTACGTTGAATACGCTCAAGACAGAAAAGAGTATCGGATGCTGTACGCTCATTCTTTGCCAGAGACTCCAGATAAAAAGGGATGGGAACCGCTTCTTGAGCATTTAGAGTGTGTTGCACGCTGTGCTGCCAGATTTGCATCCCCTTTTGGATGTGCTGTTCTGGCGGAAGCTGCTGGATTGTTGCATGATCTTGGCAAGGCGTCCGAAGAGTATCAGGATTATATCAGCAAGCAGGCAGCCAAAGGTCCAGATCACAGCACAGCAGGCGCACGGGAAGCGGTAGCGCGCTATGGTAAGATATGGGGACGCTTGATTGCGTTTGTGGTGGCAGGTCATCACGCAGGCCTGACAAATGCATTCCAGAGTGAGCGATGGAGTCCTACGCCACTGAATG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //