Array 1 23473-24524 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIHAZ010000001.1 Enterobacter sp. RIT637 NODE_1_length_767221_cov_15.434011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 23473 28 100.0 32 ............................ AAATATCACCAGATGATAATGCGGGCGCCAAT 23533 28 100.0 32 ............................ CGATTCTCGCGTTCAGCGTCCGGAGTATTTAG 23593 28 100.0 32 ............................ TGTCGGCAAACCAAAATAATCCGCCATATCAC 23653 28 100.0 33 ............................ ACGTCAGCGCGCGGCCAGACATTATCCCGGTCA 23714 28 100.0 32 ............................ ACTTTCACAGCAAGCGCAGACATTTTTACGTT 23774 28 100.0 32 ............................ GGTGCGCTGTCGTTCGCCTGCGAGTTATCAAT 23834 28 100.0 33 ............................ AGCCGCGACGACTCCACGCCGATTTCACCACTT 23895 28 100.0 32 ............................ GAAGTATTACCGCGAAAACATGCCCTCGTTTA 23955 28 100.0 33 ............................ CCAGAGCCGAACAGGTAGAAGCTGCCGTTCGCC 24016 28 100.0 33 ............................ TTCGGCGTTTCTGGAGCATATAAACATGGTTTC 24077 28 100.0 32 ............................ TCTGCTTCAGAACGTCGCCAGCTGCAGCCAGA 24137 28 96.4 32 .......................G.... ACGACCGCGAGCAGATGAGCCGTATGGCCCAT 24197 28 100.0 32 ............................ GGCTCGGCTAATTGGGTAGGTGAAGGGAAGGG 24257 28 100.0 32 ............................ AGTGGTGCCCGTGACCTTGAGCTGGCAGACGA 24317 28 100.0 32 ............................ ATTATGCTGCCTCCTGGTAGTGCAGACGGAAC 24377 28 100.0 32 ............................ ACGAAAGGGAAAGCAGTGCATTCACTTACGTA 24437 28 92.9 32 ............G..A............ AATGAGCAACATCGACAAACAGGCGCTACAGG 24497 28 78.6 0 ...........C.........AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAACAGCCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGTGATATGTTGCCGCACCTCACGGGACTCCTTCATGACATTACGCATTCGATGGCCGCGGATGTCGTTGCACCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCAATCCGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACGTATTGATTTATATGGTGCGAATTTACGTTCCAGAAAAAAGGGTTTTTATGCGTTAAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAAATCCACCCTCAAAAACATTCACCTTGCCTATTTTAAACTTAATACCATCAAACCCACACTCTCTATTTTTCACAATAAATAAAAAAATCATTCACGCGTCAATTATATTCTAATAAATATATTATTCGTAAAGATAATACATTAAATGAAAAAATAGTTTTTCGCTTTATTATTACGGTAATTACTCTTCATTTGATACCCGTCAAATTTGTTTTCATCTTATCTCCGATAACATACCGCCCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATTCTGCATTCAAAACGCGCCAACATTTATTATCTGGAGAAATGCCGCATCCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGCAAAGAGTCGTTTTACTGGAATATTCCCATCGCTAATACCACGGCGGTGATGCTGGGAATGGGAACATCTGTTACGCAAATGGCAATGCGGGAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 34012-34578 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIHAZ010000001.1 Enterobacter sp. RIT637 NODE_1_length_767221_cov_15.434011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 34012 28 96.4 32 .........T.................. TTGGGCAGTCAGGTTGCGCTGGATATGAACCT 34072 28 96.4 32 .........T.................. TGGAAAATACGGGTAAAGCCTGTTCAGGGTGT 34132 28 96.4 32 .........T.................. CGTTGCTCCGTCCGGTCATGGCGTGACAGCTA 34192 28 100.0 33 ............................ GTCATGCGCTGGCCTGGCAGCCGCCAGGACATC 34253 28 100.0 32 ............................ GCAACTACCTGCCCGATCTGAGCATTTAGACG 34313 28 100.0 32 ............................ CAGAAGAGGCGCGGAAAGTGCTGGAGGACGTG 34373 28 96.4 32 ..A......................... CGAAGGGCCGGGCTGAGACAGCAGGGCTGGCT 34433 28 100.0 32 ............................ TTGTAACTCCATCCCGAACACTGAGCCGCTTC 34493 28 85.7 29 A.C........C...C............ ATAGAAAATAAGGTCTCCCCCCTTACTCT C [34517] 34551 28 67.9 0 C.T.....T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 10 28 93.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAACGAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTTCGTCCCGCGCTTTTGCGGCGGGCCACGTTGCGTTCGTTAATTCCGGTGACGCGCAAAATGTCTGCTTTCGACATCGCGGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCAGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTACCTCCGGGTTTATGTCATTTGTCATGGTTTAGTATAGCCATTTGTCAGGGTGAGTGAAATGGTTGTTTTGTATGCAGAGGGGAAAGTGGGGCATTTGACCCTAATTTTTTGTGTATTTGTAATGCATTGATTTTAAATGGATAATTTGGGTGGGTAAAAAAGAGGGTAAGAGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATAGTGTGGGGATATTATTCCA # Right flank : GCAGAAACAAAACCTAAATAATTGTTCAAATAATCAACTGCACCAAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCAGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGAAACGACAG # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTGCACTGCTGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //