Array 1 96842-94134 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQCH01000043.1 Klebsiella pneumoniae subsp. pneumoniae strain KPH+04 123-HLP111_NODE_2.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 96841 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 96782 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 96721 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 96660 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 96599 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 96538 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 96477 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 96416 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 96355 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 96294 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 96233 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 96172 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 96111 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 96050 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 95989 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 95928 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 95867 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 95806 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95745 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95684 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95623 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95562 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 95501 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 95440 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 95379 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 95318 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 95257 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 95196 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 95135 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 95074 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 95013 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94952 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 94891 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 94830 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 94769 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 94708 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 94647 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 94586 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 94525 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 94464 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 94403 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 94342 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94281 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94220 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 94162 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //