Array 1 1862787-1863482 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================================= ================== 1862787 32 100.0 34 ................................ CCATTCGCGGAATGCTGACAAAGCTGGTTGCACC 1862853 32 100.0 33 ................................ GATTTGACTTTGATTACGGTTGATGGAACAAAT 1862918 32 100.0 35 ................................ TTTCTACACAAGCGAAATCTTTGATTACGAGGTTT 1862985 32 100.0 33 ................................ TTGCGACTCGACTAGGCCAGCGAGAAATTGAAC 1863050 32 100.0 35 ................................ TCCTATGCTTTTGCAGCGCATTGACGAACCGATAG 1863117 32 100.0 33 ................................ CCAGCCTTGTTCGACCTCTACCTTTCCCTTTGT 1863182 32 96.9 35 ...........A.................... TACCACTGCTTTTACGAAGTACTCGTTTAGCTCCT 1863249 32 96.9 34 ..........A..................... CAGATGTCCATGTTGATTTGACCTGTCTGTAAAG 1863315 31 78.1 105 ..........A..C......-.TC......TC TCTTTGACAGATGCTACCGATTCCGCGTCTAAAGGTCACACGTTGTGTAAGTAATAGAGTCAAATAAAAGTTTCTCTGGCCCACACTCTTTTTCATTGCAAAAAC 1863451 31 78.1 0 ............T........AC..-...TCA | A [1863461] ========== ====== ====== ====== ================================ ========================================================================================================= ================== 10 32 95.0 42 GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Left flank : GTTCAAAGCCATGAATGTGGTTTTCAAAGATCAGACGTTTCCCAAACTCGATGCCCCGGTCATCCTGAGCGCGGGCTACATGTTTGTCTTTGGCGATATCAATGCCAATGATTAAGGTGGATGGTGTGATTTGCTTGATTTTCTGGTTTTGTGTATAATTCATTGCGAGTCCTCCTTGGGTATCAATTAAGGGTCCTTTTCGCTGATCAGCTTTGGACACCTCGTATCATACCAAGGGGGCTCTTTTTGTTTCAAACCTCATAAACCTTCATTACAGGAATGCTCCTTTCAAGGAGAAACGAGGACAACGAACATTCAAAGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAATGGCCTTAAATATGTGTTAATATGTACAAAAATGTAATAATGTGATCTTGTTCACTGTGCTATGATAGGAAATAGAGGCAAAATCAAACGTTTTCGGTTGTTTATTTTCCGGAAAATGGGTAAATGTCGCT # Right flank : ACTTCCACCTCTTGTTTGATTCCTTTCCTAACAGACCTATTTTCTTCTTGTAAAAGGTCTTTCCGATAAATGCTAGTCGGTTTGTTGTTGAAGGGTTTGCAACTTCAATTCGTGTAAGGAGAGTGTAAAATAGCGTAGCCATTAAAACGAATGTGCTTTCTGGCGCAATTGGGTTGTAACGAATTGGACAAACGCTTTGACGACAGAAAGGTCGAGTGCGGAATTGGAATAGATTAACCACGTTTTTCTTAATAGTGGGTGGTTATCAATGGCAAGGATGCGGTTGTATAATTGGTCGTGCGGCCGAAGGGAAATTTGAGGGATGATTGCGTATCCTAAGCCATTGCGTACCATTTCTTTGCAAGTCTCGATACGGTCGACTTCCATCGTTACCATTGGTGGCTGGCTAAAATGATGGTTCCACCAGTCTTTGATCATATTATCAAAGATTGGATCGGTTTTATAGGATATCCTTCCAATAGAAGGTAGATCACCCATAT # Questionable array : NO Score: 8.30 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:-0.70, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1877195-1878093 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1877195 32 100.0 36 ................................ CGTAATATAGTCCGCGCCGATAAAAGGGTTGTCTAT 1877263 32 100.0 34 ................................ AAATCCATATGCTTTTAGTTTTTGAATTGCTGAT 1877329 32 100.0 34 ................................ TTCGGGCGCCGCTCTTTGAACTTAGGCACAGCCC 1877395 32 100.0 34 ................................ AGCCCCTATATCGTCAAGGACCAATAAATCACAA 1877461 32 100.0 33 ................................ CTCAGACATATAATCCTCTCCACGACAGGTGGG 1877526 32 100.0 36 ................................ CTTTAGCTTATTAATTACGTTTTCCATTACTATCGC 1877594 32 100.0 36 ................................ AATATACAAATCAGTTATGCGTTCGATGAATTCTTT 1877662 32 100.0 34 ................................ AAAGATCACTGCACACCCACCAGTGCGTGACCAC 1877728 32 96.9 35 ..........A..................... AACGATGTCCATTAGGTCGTTTAACGAGCAATTAA 1877795 32 96.9 34 ..........A..................... TCTTCGAGTTCAATGATTTTCACAGTTGCTTCTA 1877861 32 96.9 35 ..........A..................... TCGAAAATGGCGGCGACTTGCGCCACTTGCAGAAG 1877928 32 96.9 35 ..........A..................... GGTTATTTTGCATAGGTCGCCTCCACTGAGATTTT 1877995 32 96.9 35 ...............G................ AACGATATAGCGAACATGCTGCAAATCATCTATGT 1878062 32 81.2 0 ..........A...........C.CA.A..C. | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 97.6 35 GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Left flank : ATAAACAAATATATAGGAACAACATCAGATTCAGTACAAGAAGAAACGATTCTCTTATCTCCTCAGGCGATTGAGCATACGCCGTCATAAAAAATGCCCCCTTCCCATCTATATAATCAATGTTTAGGATGCCCTCATTAAAAAAGCAAGCGTTACCAACATCCTAACACATGGACAAATCGTGTGTCTCTTATTGTAAAAACGGCGGTGGTGTTAGATAGAACCCTTAGTATTACAGAATACAATACGGTGGAACGATCCTTAAAGGCAAACGATTCTCGATTTCTTCAATAAGCATTCGCCGATGCTCACTTTTCTCTAGTGCGAACCTTAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAACAGCCTCGAATATGAGTTTCTATGTACAAAAATGTAATAATGTGACCTTGTTGGGTGTGCTATGATAAGAATTAGAAGGGGAACCATTCGTTTTCGGTTGTATATTTCCGGAAAATGGGTGAAATTCGCT # Right flank : TAAGACAAGCCCCACCGCTTGCTGCAACAAGTCTTTCCCTGCTCAATTCGAGTGCAAAATACGTTTCTCTTACTAGACCAACAAGTGCATCACACCTATAAATACACGTATTAAAACACAAAACTAGAAAGTAAATTCCAATTAAGGGAGGAGTAAACAATGGAAGAGAAAGAAATGTTAGAGCTCTTGTTACAGAAGGTAACTGACCTGGAATTGGGGTTGAAAGAGCAAAAAGCGCATAATGCTGTAGTTGCAAAAGATTTAAAAGAACAAAAAGCGCATAATGCTGTAGTTGCAAAAGATTTAAAAGAACAAAAAGCGTATAATGCTGCGGTCGCAAAAGATTTAAAAGAGCAAAAAGCCCATAATGCAGCCTTCGCAAAAGACTTAAAAGAACAAAAAAATTATACTGCCGGAATCACAGAGGAACTAAAAGACCAAAAAGAGCACTACCTGGCCATGGTACAAGATATCAAGGAATTAAAAGAAGATCAGCTCAT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1992210-1992506 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1992210 32 96.9 35 ..........T..................... GGGACATTTGCCGTATAACCCGCCGCCCGCAAATC 1992277 32 96.9 35 ..........T..................... GAGGATTTATTCGGCAATGAATCGCCTATGATGTA 1992344 32 100.0 34 ................................ TAAAAAGGTAGCTCACTTTTGTCCTTTATGTGGA 1992410 32 100.0 35 ................................ ATTGAATACAGCATTACATTCATTGAAGAACCTTT 1992477 30 90.6 0 ........................--..G... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 96.9 35 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : GAAAAGTGCCTCCCACGAGAAATTGATGTGACGCACTTGCAAGACACGCTGGTGAACCAAGGGGCGATATTGAGCTGATGAGGGGAGGGGTATTTTCGAATAAAAGGATTTAGCATTGGTGTTTGAAGAGGGACTACCTTTAAAAATGAGACGAACAAGAACTCCAAACATTGGGTTTTGGAGTTTCTTTTTTGGTGTTCGTGGTATTAAAATGTGGTGGGATTAGAAGGATAGGTGGGAGCAACGGTTTAATTTGGTCAACCTAAAGAAGTTTGCCATTGAACATTAACGCCGTCGAAGACAAAAGCTTAAATCAGACGGTGCGAACCCCAAGCGCACATAAAATCACTAGATCACCCGCACCGAAAAAGAGTCTGAATATGAGTAAATGAGTATGAAAATGTGAAAATGTGGTTTATGTTCCTTGATATAATGAAGGGAAAGCGCGACTTTCCTATTTTATCTGTGGTTTTATTTCCAGCAAATAGGGGACTTTCGCT # Right flank : TGTCAACACAAAACTGGACAAATTTTTAAAGGTGTAAGGCTTTGTAATCGACGGGTGATTGATAGTCGAGTGAACCATGGAGGCGTATATGGTTGAACCAATGAACATAATCAAATAAAGCAAGGTCAAGTTCGTGTTGGTTAGGGAAAACCCTTCTCGATACAAACTCAATTTTAATCGCTTTAAAGGTGGCTTCTGCGACGGCGTTGTCATACGGCGTGCCTTTGTTGCTGAGCGAACGGGCGATTCCAAAGGTCGCTAGTGTCTGGTCCATCTTCTGATTGATAAACTCTCTACCACGATCGGTATGAAACAGAGCGATCTTCTGTAAGGGATAGGGAATTTTAGCGATGGCTTGTCCCACGAGCTCCTTATTCTTGTTTGGACCAGAACTGTAACCGATGATTTCACGGTTGTATAGATCAATGATGATACAAATATAATGCCAGTTTGCACCGACCCGCACATACGTTAGGTCGCTGACGACTACGGTTAGCGCT # Questionable array : NO Score: 8.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 1993614-1993908 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1993614 32 100.0 34 ................................ GCCGCTATTCGTTAGCTTGCCTTGCCCCGCGAAG 1993680 32 100.0 34 ................................ TACAGTAGGGATGAAACCGAACGTCTTGGCCTGA 1993746 32 100.0 35 ................................ CATATAGTCCTGCCAGAAAATTTTCAGGATGTCCG 1993813 32 96.9 35 ..........T..................... CCGTTTTTAACATAATCCATCATGATGCGCTGAAA 1993880 29 87.5 0 ...........T.............---.... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 96.9 36 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : GCCTTCATGATCCGGCCAATGCGGCGGCGTGAAACCGTCCACCCTTGTTTAGTAAGTTCTTTTTTGATTTTGCGCTGGCCATAGATGCCTCGGCTCTGACGAAAAAGGTCGCTGATCAATGCGGTCAGCTGTTCTTCCTCTTCTTCGTGATCCCGTTGCTTGGCTTCATAATAAAACGTGCTACGGGGGATGTTCAAAATCGCACACATGGCAGCCACTGGGTAGATCCCGCGATTTTGACGGATCACGTCTATTTTCGTCCCATGATCAGCGCCGCTTGCTTTAAAATATCTTTCCGGACGCATACAGTTGCACAAGCTGTTTCTTAAATTCGGCTGTGAACCTTCTTCGTGGACGTTTGGCTTCAGTCATGATATCCCGATCCCTTCATTGGATGATTCCATCTAGTCTAGTAGACCTTAGAGCATTTGTCCAACTAAGTGTAACCTATCCATGGATTGAAATAATGGAAGCAGTAGTGTTTCCGCCTTTTCTAGGTC # Right flank : TGTGGGCTTAAGATCCTTGCACGGTGTGGCTGTGTTTCCCCCATCTTATAAGTGCGCCAATTAACATCCACATGAATCGACGTTCGCTTGCGATAACAACTAATAAAGGTACAGAAAACCAAATAAGCAATATGAGCGCACCTACGCCCATATTGCTTATTTTCGTCTTTGTTGCCTATTTTAACGCTGGCCAAAATGCTTTATTCGCCTCGATTAAGTCGTCTAGTATATCTTTTGCTACTTTTGCACTTGGCACGGTTTTTGATAATGTGATGGCTTGCCATAGTTTTTGGTAGGAACCTTCTTCAAACGCTTCTACTACTAATTTTTCGACGCCAACTTGTTGCTCCATGAGGCTCTTTTGGAATCTAGGGATTTCTCCGACAACTAGTTTTTCTGGGCCGTTGCTGCCGACGATGCACGGGATTTCTACCATTGCTGTTGGGTCAAAGTTCGGGATGGCGCCATTGTTTTCGACAATCATTAACATCCGTTCTTTT # Questionable array : NO Score: 8.91 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 2000278-2002154 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2000278 32 100.0 34 ................................ GTTAATGTCCGCGCTCTTACCGCACTTATTACAT 2000344 32 100.0 35 ................................ ACTCATTTCGGCAGTCTTAGCGCCTGTCGTCTCCG 2000411 32 100.0 35 ................................ ACTATACTCGCTCCTTTATCACGCCAATGGCGCTT 2000478 32 100.0 34 ................................ CGACAAAAAAGCGCCCGCCTGCGCCACTAGCGCT 2000544 32 100.0 34 ................................ ATGTAGACACATTAATTCGCGCGCTATACATCGG 2000610 32 100.0 33 ................................ ATTCAGAATTATGTCAGTATATCCAACAACTAC 2000675 32 100.0 34 ................................ CGGGAAAGGGTGTTCATTATCGGACATCTTAGAG 2000741 32 100.0 34 ................................ TGCAATCGAAGAACTCACAAAGCGTCGCGATGGT 2000807 32 100.0 35 ................................ ATCATGTTAATGTCGTTTAACGAGTCGCCGCACTC 2000874 32 100.0 33 ................................ GATCAGGAAACGGAGCGCACAGCCCGCAAAATG 2000939 32 100.0 36 ................................ GCCTCCTTGCCTTTTATAAAGCGTTTTTCTTTGCGC 2001007 32 100.0 33 ................................ CGTTTCGATTTAAGGGATTCTCACCCACGCCAA 2001072 32 100.0 33 ................................ TATATGAAGACTCAGTATAACGTATTTGTTAAC 2001137 32 100.0 33 ................................ GGAAATGGATAAAAAAAGTCATGCGAAATCCAT 2001202 32 100.0 34 ................................ CGCGCGCTTGGCCGGCCGCAGCTCGCGCCCTCCG 2001268 32 100.0 34 ................................ AAAAATCGGAGGCCGTTCCGTTGATCGTCTCAGC 2001334 32 100.0 33 ................................ GCCGACGCCTATACATGAAGTGCCGGGAGGGCC 2001399 32 100.0 34 ................................ ACCAGCTACCCAATCACTAAACCTTTCCGCCTCC 2001465 32 100.0 34 ................................ TCTTTACAAGTTTGTTTTTATTGAGTGCTTGTGG 2001531 32 100.0 34 ................................ TCTTGCTTATTTGCAATGTTAGGTGGTGTCCATC 2001597 32 100.0 34 ................................ GCGGAGGAAGGGGACGTCATCGAACTTGAGGCGC 2001663 32 100.0 33 ................................ AAAGCTGAACGGACAGTCAGGTAAATTACGCTC 2001728 32 100.0 33 ................................ TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA 2001793 32 100.0 33 ................................ AAAGCTGAACGGACAGTCAGGTAAATTACGCTC 2001858 32 100.0 33 ................................ TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA 2001923 32 100.0 35 ................................ ACAAAAGACTAGCAACAGTGTCACAGACAGAAACG 2001990 32 100.0 34 ................................ TCTGGTCGTTTCAACGCCTTCAGGGGGGTTTCAT 2002056 32 100.0 35 ................................ TCAACTCGCGCTCAGTACGAAAATCAAAAGGCTCT 2002123 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 100.0 34 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGTTCCTCGGTTATAACGTCATCTTTTTTTTGCATGTGTTTACGCATGCAGGTCAAGCACTGCTACTGAAAATGTATACACCAGGCGTCATTACCGCCATTATCGTAACACTTCCGTATTCTCTTTATTTGTTTTACCGGTTAGCGATGGAATATAATATTCAGATTAATGATCTTATTGCCAGTATCCCATACGGATTGACGATTATTCCAATCGTGGCTTTCGGTCATCTACTAGCTAAAACTGTGGTTCGGTAAAAAATGTTGAGGTAACCCATGGATGTTTTCAGTTTACTTCAATATCAAACAACTACTATTTTGGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAAAGCACTTAAATATGGGTTAATGTGTGGAAAAGTGTTAAAATGTTGTTCATATCCCATGGTATGATATAGGAAAAGAGCGGCTTTTCTCTATGATTCATCAATTAGTTTCCAATAAATAGGGGAATTTCGCT # Right flank : TTTTAGTAGCCTTACGGAACCGGCCGAAATTTTCGTTGGATAGGTTACACTTAGTTGGACAAATGCTCTAAGGTCTACTAGACTAGATGGAATCATCCAATGAAGGGATCGGGATATCATGACTGAAGCCAAACGTCCACGAAGAAGGTTCACAGCCGAATTTAAGAAACAGCTTGTGCAACTGTATGCGTCCGGAAAGCCGAGAGCGGAAATCATCCGTGAATATGAACTGACGCCATCTGCTTTTGATAAATGGGTTCGTCAATACCAAACAAGTGGCGCATTCACCGAGAAAGAAAATCGTACGCCTGAACAAGAAGAGCTGATCCGCCTACGAAAAGAAAACCAGAAGCTCGCTATGGAAAATGATATTTTAAAGCAAGCGGCGCTGATCATGGGACGAAAATAGACGTGATCCGTCAAAATCGCGGGATCTACCCAGTGGCTGCCATGTGTGCGATTTTGAACATCCCCCGTAGCACGTTTTATTATGAAGCCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 2003427-2004258 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2003427 32 100.0 34 ................................ TTTTGTGTAAGCAATAAGCGCACGAACAACCATG 2003493 32 100.0 34 ................................ GCGAGTTCCATCGAACGCCTCAGCGAATGGTAAT 2003559 32 100.0 35 ................................ ACGAACGCGCTGAAAGAACAGATTATGCGGAACAC 2003626 32 100.0 35 ................................ TGAGCTTACCGGACTAGTTAACACTTGGGCGATAG 2003693 32 100.0 36 ................................ AAGGATGCGGTGCTTGAAAAAGGAGATGACGCTAGA 2003761 32 100.0 35 ................................ TTATCTTCTTGACTTCGGGAGCGGGACCATATCTC 2003828 32 100.0 37 ................................ GCCAATTGAGTCCGTCTATATAGCTGCGGACAATGAC 2003897 32 100.0 34 ................................ GTTGCAAATATGAAGCTCTTTCCAACACATATCT 2003963 32 100.0 34 ................................ CAATACAAAAAGCCTGTCCAAGTAGCTAGACTGG 2004029 32 100.0 35 ................................ TCTAAAGGTGTACCACATTTACGAGAGGAGCTAGA 2004096 32 100.0 34 ................................ AAATAAATGGCCCGCACACCAAGTCAACAGCGCC 2004162 30 93.8 35 ..........--.................... ACATAACAGCTAGTGCAGCAAAACAGATTGTGCTG 2004227 32 96.9 0 ..........A..................... | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.3 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : AACCGTAGTCGTCAGCGACCTAACGTATGTGCGGGTCGGTGCAAACTGGCATTATATTTGTATCATCATTGATCTATACAACCGTGAAATCATCGGTTACAGTTCTGGTCCAAACAAGAATAAGGAGCTCGTGGGACAAGCCATCGCTAAAATTCCCTATCCCTTACAGAAGATCGCTCTGTTTCATACCGATCGTGGTAGAGAGTTTATCAATCAGAAGATGGACCAGACACTAGCGACCTTTGGAATCGCCCGTTCGCTCAGCAACAAAGGCACGCCGTATGACAACGCCGTCGCAGAAGCCACCTTTAAAGCGATTAAAATTGAGTTTGTATCGAGAAGGGTTTTCCCTAACCAACACGAACTTGACCTTGCTTTATTTGATTATGTTCATTGGTTCAACCATATACGCCTCCATGGTTCACTCGACTATCAATCACCCGTCGATTACAAAGCCTTACACCTTTAAAAATTTGTCCAGTTTTGTGTTGACATTCCAC # Right flank : TATGCCTTGAGACTTTGCCCCCTGGGTTAGAGAGCAGGCCCCTATGCGCTGTTTCCTCATCCATCTTGAGGTAAAGCTGTCCTTTTTTCTGGAATCTTACAATTTCCATGCCTGCCAAAATGGAGCGACCGTTTTTATTGCTGTGATTAGTGTTAATAGAAAAAATGACTAGCTACAGGAGGAAGCGAAATTGGAAATTCGTACAGTGAAAGGCTCTGACTACTATGTCATTTCCCCACTAATTAATAAGTGGTGGGGTGGAAGAAAGATGTCGGATAAGTTACCGAAATTATTTTTCGACCATTTTTCTAATACAAGTTTTGTTGCTGAAAGGGATGGAACACTTGTCGGCTTTCTAATCGGATTCTTTTCTCAATCTCATCAAAAAGTAGCCTATATACATTTCGTTGGAGTCCACCCTGATTATAGAAAGCAAAGTGTTGGCAACCTATTATACAATCGATTTTTTCATGTGGTTCAGCAAAACGGGCGAAATATTG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 7 2011506-2012788 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2011506 32 100.0 34 ................................ CCACAAGGTCGAGACATTCGAACGGAACGATTCG 2011572 32 100.0 33 ................................ GTATCTCGGCAAATAAGTCGCCCGCCGCCGCAC 2011637 32 100.0 33 ................................ AGGTTGTGTCGGAAATGTGTGGAAGAACTTAAC 2011702 32 100.0 33 ................................ GCGCCTCGTCCTCGGAATAAACGGGACGCTTGT 2011767 32 100.0 33 ................................ CCTACCAAAGCCAAAGGGCCAAACTAGTGATAA 2011832 32 100.0 35 ................................ GACCAAGTATCCGTTGAGGTGTTATCTACCATCAC 2011899 32 100.0 33 ................................ ATGTCAATTCCCGGACAAGCAGTGCTCGCGCCC 2011964 32 100.0 36 ................................ TAATTGATCTGCCGGACATACTCGCGCTAAAACGTA 2012032 32 100.0 33 ................................ GACGTTACCGTCCGCGCGACGTTTAACACGAAA 2012097 32 100.0 33 ................................ TAACCGCGGGCATGGAGATCGTGCACACGCTCA 2012162 32 100.0 35 ................................ AACGGTAAAGTGGACGAATCGGATGCGGTGAGACA 2012229 32 100.0 35 ................................ ATTGTTATTTATCGGGATCGCCTTTTTAGATATGC 2012296 32 100.0 35 ................................ CAGAAAGTCAAAAATTACGAAAACCGAACACTCTA 2012363 32 100.0 33 ................................ GTAAGTCTTGCCCGTCTCACGCGCCAGCTCCAT 2012428 32 100.0 34 ................................ GGCATGCCTACGTCTCCTTGTACAGTATCAAGCA 2012494 32 100.0 33 ................................ GAGGAAATCAATAACGCTCCACAAACGTTTTCT 2012559 32 100.0 34 ................................ GCTCACTCCTCCGTGTCTCCATTTCGGTCGCTAC 2012625 31 96.9 35 ..............-................. TGCTGCAAAATCGTTCTATCACCTGATGCCTGATT 2012691 32 100.0 34 ................................ CAGTAAGGAGGAGTAGTGTCATGAAACATGATTT 2012757 32 75.0 0 ..........TCA...C...A.......C.CC | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 98.6 34 GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Left flank : GAAATGGCAAAATCAAAAATCCGCATGGTTGGCAGTGAAAACACGGTAGTGCCAGCATTTGCGTGAAAAGCGTAAGCCCGGAGTCCTTCACCTTCGCTTGTTAGGCTATGTACTAACAAGCGGAGGTGTTTCTTTCATTAATTGGGAAGGGGGAGAAGAACTCAATCGAATAGGTGTATAAGCAAGGAACTTTCCTTACGCCAACAGGAGTTTTCTTATCAAATATAGTAAAATAGACAGTAGTAGAGACAGACACAATTGACGAGGGAGATTAACATTTACAATTATTCATTTTAGTATTTTGAACCTGTGATTCTTTAGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAAAGAGCTTGAATGTGGGTTAATGTGTGAAAAAGTGTTAAAATGTTGTTCGTGTCCCATGGTATTATATAGGAGAAGAGCGGCTTTTTCCTATTATTGATTGTTTGGCTGCCAACAATTAGGGGAATTTCGCT # Right flank : CCTCGTCACTGCTTCTAAAGGAAATGCACAGTTGTAGCGGTGTTGGAAAAATAAGTTCTTTGTCGTGATGATAGAACAGCAGCTCATAGCTTTGGCAGTTAGTAAAACATGTCTATCTTCACAGTGATTCCAAATATTCACCATTTGTCTGGATCGGTGAATGCCGAAAATCTATTTAAGTTGTTGGAGGGAGTAGTCAGCATGTTAACAAGGGAAGATATCTTTAAGCACGTCAAAGAAAAATTCCGTACATCGCCTGATTATCCATTTCAAAAATTTCCAACCTATGCTGCTTTGAGACATAAAGCGAATGGAAAATGGTATGGCCTTGTTATGAATGTTCATCCAGAAAAATTAGGGTTGGATGGAAATGACGAAATAGATATTCTGAATTTAAAATGTCATCCTGAAGTAAGTGGCAGTTTGAGAAATGGAAAGAGTATTTTACCTGGATACCATATGGATAAGGAAAATTGGATATCAATTGTTTTGGAACGTGT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 8 2016612-2017041 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2016612 32 100.0 33 ................................ TCGCGTAATAAATCGTCTTAATCCCCTTATGAT 2016677 32 100.0 35 ................................ ATCCATACATTTCGGTCGTTCCGACACAGGCTGCG 2016744 32 100.0 34 ................................ CGCTCAGGATGTCCCCAACCCCTACTGTTTTAAG 2016810 32 100.0 36 ................................ ATACAAGGATTTAAGGAAATAGATAAACACTATTGC 2016878 32 100.0 34 ................................ CCTGACTTTTTAATCATGCCATATCCGGTAAAAA 2016944 32 100.0 35 ................................ TCAACGTAGTCATGGAACTCTGCAAACGTCGTAGC 2017011 31 78.1 0 .........C.T.......T...A...-..CC | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 96.9 35 GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT # Left flank : GGAGTCTCGTTCACTTAGGAAAAGTGAGTTCATGGCTTTTATTAGTGATTGTTAGTTTCCTGATTGTAGCGACATTAAAACAAGTGAAAGGGAAGAGATCCACTGGTGTAGATGCTAGTCAGTCTTTTATAAAAAAGCAGTGAGTGCTTTTTTATAATGAAGAAACAACCATTCTTACTGTTAGTATTAATGGAAAGAAACATAAAATGAATGAAGGACAATAGATCGAAAGGGGCGATATAAGAATAGAAGGGAACAACATCCACAGTTTGATCTTCTTAATCTTCCAAGAAAAAGAGGAGCAAAGAAGCAGCATTTTTAGTGCGAACCCCAAGCGCACATAAAATTACTAGACCACCCGCACCAAAAAAGAGCCTAACTATGGAAAAATATGTGCGAAAATGGTTAAATGTTGTATATGTCCCATGGTATGATAGAAAAAAGAGCAACTTTTTCCTATTATTGATTGTTTAGATTCCAATAAATAGGGGAATTTCGCT # Right flank : CAGCGCAATCAAAGGCGGCAACAAACTAGCGGTTTTCCGCATTGCCGCCTACGACAAGGAAAAGAAGAAACGGGTTTCTTCAAAGCAAAAAAAGCTTATTTATCAAAAATAAAGACAAACTCGAAGAATTATATGCCAGTCTCCAAAAAGGACAGCTAATCTCTGTCGAGCACAAAGAAAACAACGGATATACAAACATTTATGGTCTGATGGATCGCTCTTACGCAGACAGACGCAAGTCAGCGCAGAGAGGACAGGAAGCGGAAGCAAAAAGAGTGACTGGTCGTGCCAGTCACTCTTTTTTTGACCTATACTTCGAATAAATATTATAGACAAGCGCTCACAAATTCGCTATTTATCACAGTTTAATCCTTTGTGAACCGATCTTGTTCTTCAAACTCAAAAATGATTGATTTTACATTGTGTAGATTCTCTTCTGCAAATGTATCTTGATCATTCTTATCCTCTATATACACCATTGCATTGGTCTCTATTTGATA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 9 2019471-2020497 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019985.1 Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2019471 32 100.0 34 ................................ ATTCCTTTGCCCCCTCTAGTAATCGCTTCGAAAT 2019537 32 100.0 35 ................................ CGGGATTACCTATACGCAGGATGACGCAAAGCTGA 2019604 32 100.0 34 ................................ GTAGCTGAAATTTCCCTTCCTTTCGATGTGTTGA 2019670 32 100.0 34 ................................ TCTCCTATTATTTTTTTATTAATCTACTTATCAT 2019736 32 100.0 34 ................................ GCCAAATATGTCGTGATAGTAACGTTTTAGAGCG 2019802 32 100.0 34 ................................ TTGTGTCATGTCGTTATTAATCCCAAGTTGCTTG 2019868 32 100.0 35 ................................ TGCTACAAAGGGCGAGAAGTCCTTAAAAGACCTAA 2019935 32 100.0 32 ................................ ACGCCTGCCAAGCCATCGAAGCGTAACGCCAA 2019999 32 100.0 33 ................................ AACGGTATCTCAGCGTCCTGACTACGTACCTTG 2020064 32 100.0 33 ................................ AGCATATCTTCAACAGATTTTCGAAGCGTCATC 2020129 32 100.0 35 ................................ AAGAGAGGAAAACACTGAAAAAGAAAAAGGGGATG 2020196 32 100.0 35 ................................ CTATCGAGGACGTTGTTAAGATAACTAAGGACTAA 2020263 32 100.0 37 ................................ TCTTTGTCTGCTAGGCTGTCTAACGGCGGTTCAATCA 2020332 32 100.0 35 ................................ AAATAATTGATAAATTAAGCAGCTAAAAAGATAAA 2020399 32 100.0 35 ................................ GTAATAGCGTGGCCGCATCTGAAAAGGCTGTTAGT 2020466 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 16 32 100.0 34 GTCGCACTCTTAATGAGTGCGTGGATTGAAAT # Left flank : CTTGTCAAACGATAAACGGAACGGTTCAGGAAACATATTTGCTTCTCAATCGTAGCAACTAAGAAGACATAAAAGCGCTTTACATAAGCTCGGCAAGAATGGCCCTGGAAGAAGTAGAAACGGTTTTCAGGCACTCGCCTAGACAGCGTCTTAACAGCAAGGATCAGGCCCATTTCATACACATATCAAACAAGAATGGCGAAACAGATACACAACTCATAGGGGAGAAGGGATGTTAGTAGGCAACCGACTCCCCTCAATCGTTTCTTTGTGAGCAAGCGAAAAGTTCTGTATGATTGAAGAAGATCAAAAAACACTTGGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAAAGAGCTTAAATATGAAATAATATGTGTAATGATGGTAAAATGCTATACGTATGCCATGATAGAATAAAAGAAAAGAGCGGCTTTTTCCTATAATTGATTGTTTTCCTGTCAATAAATAGGGGAATTTCGCT # Right flank : TTGCTTGATTACGGCGTCTGACATCATGCCGTCACGTCACACTCTTCGTAAGTGCGTGCTCGTTCGTATGCAACCTAATAACCAGTAGGTTATCGACGTAAGGCATTTGGGAGGCGGATCTGCCATAAAACGAAAAACAGTAGTTTTAGGTATAAGTGGGTTTCTAGTAATTGGTATGGCTGTAAGTGCAGTCATCTTATTGAATGCGGACAAGGAATATGTGCCAGGGGGAACTCAATTAAAAAAGAATGAAAGAGACTCGATTGATTATTGGACCAAAGACAACATGAAAAAAGCTGTTCCAGGGGCAGGAATGGACGAATAAGCCTGCTCCTCGAACAGCTTTTGCTAACTAGTTGGTGTTTGGTTTCGTTCGTTATTTTTTTCTGAACTGGTGTTTAAAGCGGTTAAACGGGGTGAAGTATGAAACTGCGTAGTCTAAGTTAATGAGCTCGCTGTATTCAAAGACGCGCCCGTCGTTAAGAATGCCGCGATTGACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTAATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //