Array 1 66930-65712 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LDIS01000004.1 Aliarcobacter thereius strain 440 AAX25_contig000004, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     66929	    36	 100.0	    29	....................................	AGGTGTACAAATACATTCAACAGATGTAA 	
     66864	    36	 100.0	    29	....................................	AAGTAGAACTGATAAATCAACTGGTGTAC 	
     66799	    36	 100.0	    29	....................................	ACTACTTTTAACTAATAAAGCTTTAGAAA 	
     66734	    36	 100.0	    30	....................................	CAGGAGCAGTTGAAATAATTACTTCAAGAA	
     66668	    36	 100.0	    29	....................................	TTGTTTATTTGTGAATTTCACGGCTAATT 	
     66603	    36	 100.0	    29	....................................	TTACTATATAGGCGAACCAATAAGACCGA 	
     66538	    36	 100.0	    30	....................................	TAGATGGAGAAATTATAAATCTTGAAAAAT	
     66472	    36	 100.0	    29	....................................	TCATAGTTATATTGGAAACCCGACTCGCT 	
     66407	    36	 100.0	    30	....................................	ATAGACAATATCATCTTCGTACCTTGGATT	
     66341	    36	 100.0	    30	....................................	ATTATAAAATTGAAGATGTAGAGCAAATAA	
     66275	    36	 100.0	    30	....................................	AGAAACTAATCCTGAAAAATCAATCCATTT	
     66209	    36	 100.0	    30	....................................	GCTACGAATACTATCAAGCATAGTTTTAAT	
     66143	    36	 100.0	    30	....................................	TGGTTGCCATCTAACTATGGATATGCTGAA	
     66077	    36	 100.0	    30	....................................	TTTATTCTTTAGCTCATATATTTCAAGTCA	
     66011	    36	 100.0	    30	....................................	GTACGAGTGCAGTTATAACAGCTTATATAC	
     65945	    36	 100.0	    30	....................................	ACTAAATGCAATGTATACAAGTGTAAAAAT	
     65879	    36	 100.0	    30	....................................	TAGGATATGAGTCAAATACTAGAATTATCA	
     65813	    36	 100.0	    29	....................................	GCTTCAATTTATTCAAATATTAAAAATTT 	
     65748	    36	  94.4	     0	...............................G...G	|                             	T [65715]
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.7	    30	ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC	                              	       

# Left flank :   CAACGAGTTCAAATATCATATTGCATGAAACAAATAGTTGCAAACTATCAAAGTATATGTTTGGGTAAAGTTGAAGATTTAAAGCTTTTTAGATTATGAAAAAGCAAAAAAAAGAAGAGATAAGTAGGTATAGAAAAATGGTACTCTTTGCAATGTTTGATATGCCAACAGATACAAAAGGTGATATTAAAAAATATACAAAATTTAGAAAAAAACTTCTAGAGATGGGGTTTATAATGTTTCAATTCTCTATTTATGTGAGATTTTGTAACAGTTTAGAAACAGCACAAAAATATGAGAGAAAAATCAAAGAAATTGCACCAACAAAAGGTTCAATAAGAGTATTAAAAGTAACAGAAGCACAATATAAAAATATGATTATTATAGAAAATTATCGCAAAAAACCTGAAAAAAAAGTAGAAAAACAGACTCAAACAGTGCTTATTTTTTAGTGTAAAAACTTTATAAAACCCTGTATTACAGGGTTTTTGCCTACTCTA
# Right flank :  AAGCTTTAGTTTCCTAAAGCCTCTTTAATAGCAAAAATTTCATTCATTGTTTTATAAAGTTGATCAATATGAAGCATATTTGGACCATCACTTTTTGCAACTTTTGGGTCAATATGCGTTTCAAAGAAAAATCCATCTACTCCAACACTAGCAGCCGCTCTTGCCATATATGGTACAAAAGAGCTATTTCCCCCAGTTGTTCCACCAGTACTTGGAATTTGAACACTATGAGTTGCATCAAAAATCACAGGAGCATATTGTTTAAGAAGTAGTAAGTTTCTCATATCTACAACCAAAGCACCATATCCAAAAGTATTTCCTCTTTCACAAAGCCAAACACCAGCTTCTTTACTGCTTTCATAACTTACTTCATTTACTCCTCTTGTGTTTAATACTTTTTCAACAGGATGTTTCATAGCATCAGCTGCTAAAAATTGACCTTTTTTTATATTTATTTTTGCAGGAGTTTTAGCAGCAGCTACAAGTAAATCTGTTTGTCT

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-2.20,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//