Array 1 926931-928287 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031003.1 Latilactobacillus curvatus strain TMW 1.1928 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 926931 36 100.0 30 .................................... AATGCTGAAGACAATAACCGCACCCATGAA 926997 36 100.0 30 .................................... GCTTCGGCTGGTCAGATTGCTGCAATGGGT 927063 36 100.0 30 .................................... AGAGGTTTTCACGTCATGGACTTCATCGCT 927129 36 100.0 30 .................................... CAATTTCTGATTCATCACACTGCGAAGCCT 927195 36 100.0 30 .................................... ATGATGCGCGAAAATTAATGAATTCAGGGA 927261 36 100.0 30 .................................... TTCAGAAATCTTAACCAATCCTGAAACGGG 927327 36 100.0 30 .................................... CATCAACTCCAACCAAACATGTAGCGCCAA 927393 36 100.0 31 .................................... TTAGCCTCAATGACAACGCAACAAGAGCACG 927460 36 100.0 30 .................................... TAAAAAAGGTCAGGATAAGTTAACTGAAGA 927526 36 100.0 30 .................................... CTGACGATGAAATTGTTGAATCAGATGATG 927592 36 100.0 30 .................................... AGTAGCTGAGGCTGGGACTATTTATAAGCA 927658 36 100.0 30 .................................... AATTGAAGGCTGAACAAGCAGAATATTTCT 927724 36 100.0 30 .................................... TAATAGTGTTTCGAATTGACCTGGCATCGC 927790 36 100.0 30 .................................... CTGACATTTGGGGTGCTGATTGGACAGACG 927856 36 100.0 30 .................................... TCTGGTAGTTAAACTTAAAGACAGTTCACT 927922 36 100.0 30 .................................... CTGCCCTTGATGGTGCCGATGATCCATTCA 927988 36 100.0 30 .................................... ATAAGGAAACGAATAAAGCGCCAATTAACG 928054 36 100.0 30 .................................... ACATGAGCAACCAAGAACGTATTCAGACAA 928120 36 100.0 30 .................................... ATAATGTCTAAAAGCGTCTTGTATCCTGTT 928186 36 100.0 30 .................................... AAGGCGCTTCTGGAATCTGGGATAGTGTCA 928252 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 21 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : GCAATTAATTTGAATCATCTATTTCAAAATCGGTTGATTAAAAAATTCGCCGCCGACTTAACGGATCAGCAGCGCCAGAAATTAACTCAGTTAGATAGTGAGATTCGTTCAACGATTTTGGATGCGGCCTTTATGTATGAATTGACCTTAGATGTCAACCAGGAATGGGATCTTCAAAGAATGATTAAGTTCTATAATTTACAATTTTCGACTGCCGTCCAGCATGACCCATATGGTATAATTGAGAGTATAGTACAGACAGCAGTAGAGTTAAATGAATCAAAAATAATCACGTTGATCAACGTTTCGCACTATCTCAGTATCAACCAATTTAATGAATTGGTGAGGTTGGTGGCGACATTGAATGTGAAACTCTTTCTCATTGAATTTTCAGAAGAGGTTAAATCTGATCAGTACCAGAAATGTTGTTATTATCACATCGATAATGATTATGTCGAATGGCGCTATGAATAAAATGAAATTCTGATGAAAAAACGACG # Right flank : CACTGGCTGGCTGCTGAACTGCTCCTATGTCAATAAATGGCACATCTTTTTCTAAACACTCGTTCTAATTCTGTCGGAATTAAACCAACTGATGTAATTTGAGGTTCGGATTACCAAGTCCTCAAAATTGGAAAAAGTTGTTTGAAAGGCAAACTCTCTCTTCAACAATGAGTGAAAAGCTTCAATTGGCCCATTATCATAAGGATAACCTTGTTTTGAGTATGAGTGGCTAATCTGATGCCGTTCAAGTAAAGTTTCAACTTCGTTGCTGGTGTACTGTGAACCCATGTCAGAGTGAAAATATTGTGGCTTTTGATGATATTCAAGCGCCTGATTAATCGTTTCTACAACTAACGTCGCCTCCATCTGACGACCAATCTTGAAAGCAAGAACTTGATGAACCTTTGGTTCGTAAATAGAACTGAGATAAACCCAGGTTCCTGGACGTAATTCCAAATAAGTAATGTCAGCACGCCATATCCTTGCATTGGGCTGGTGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 1314658-1314264 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031003.1 Latilactobacillus curvatus strain TMW 1.1928 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1314657 28 100.0 33 ............................ TAGCCTTACCCGCATCGACTAAAGCGTCAGGAA 1314596 28 100.0 33 ............................ CTACCACCTCCAAATGCGGCATTGAGTTTTTTG 1314535 28 100.0 33 ............................ CTACCACCTCCAAATGCGGCATTGAGTTTTTTG 1314474 28 100.0 33 ............................ TAGATTCAAATATTATAAGGATGTCGAACAAGA 1314413 28 100.0 33 ............................ CTCGGGCAGTGTCTCCACCAATCAGTAAGCTAC 1314352 28 100.0 33 ............................ TATCCCTTGAGAAGTTGTATTTGTACCAGCAGT 1314291 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 7 28 100.0 33 GTGCTCCCCATATACATGGGGATGATTC # Left flank : TACTAAAGCAGAAATTATTTCAATTGGAGCAGCCAAGATAATGCCCGACGGACAATTACTGCAATTTGAAAAATTAATTCGAAGTGTGGATTCAGTACCATCCAAAATTACTGAACTTACCGGAATTACTTCAGAACAGTTGCAAAAACAGGGTGTTGAGCTTTCATTAGGATTAGAGGCATTGTCTGATTTTGTTAAGGATTCAGTCATCATCGGTTATAATCTTGAATTTGATGAAAGGTTTTTAACGGAAGCATTGCGGAAAGTTGGAAAAACCGAATTTACTAACTCTACCCACGATCTTATGCCAATAGTAAAAACAACTCAGGAGTTTTTAGATAACTATCGTTTAACGACTGTCTTGGAAGTATATCAGATAGAGAATTTAGATCCACATCATGCATTATCTGATGCTCAAGCTACGTTGTCTTTAGCAGAGAAGTTAATAAAAAACGGCAACCTTGTAATTTGAAAATGCCTATGTAAAGGCTTTTTTTAGT # Right flank : TGGTACAGACGGTGGAACTTGGATGAACTACATTGTTGGTACCACTGATACCACAAAGAGACATTATGTGGCAACCATCTCGCTGGATGGGTTTTCGCAGCAAGGTGTTTATATCCGCCTTGATAATATTCCTTCGACATCCACTATTACATTTTCAAATATGAAACTGCAATTAGGTTTAAATGTGGTGGTCTCCAATCTTTCTCAAGCCGCGGATGGTATGCGATTTGATATCTCTAAGAAAATTGAGCAGAAGGATCTCAACGGATATGCAACCCAAACGTGGACACTGGATCAGATTAAGTTAATTTCTGATTCAATTGCTTCGTTGAAAACAAAAATTGACAATCTTAGTCAATGAAAACAATAAGAAGTAACATCCACAGCTATAACTGATGGGTCAAACCAGGCTCCTATGTCAAGAATCCGGACATAAAAGTACGAACAAATTTGACTTTCAATTTAAATTACTTAATTTAATTTTCGGAGGCCGAAGTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCATATACATGGGGATGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 3 1326186-1324390 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031003.1 Latilactobacillus curvatus strain TMW 1.1928 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1326185 28 100.0 33 ............................ CCACCAGCCTTGGCCGGCACTTTCGAATTCACC 1326124 28 100.0 33 ............................ TCATGTGGGAATAATGCTTGATGATGTACCGCA 1326063 28 100.0 33 ............................ CGTAAACTTGAGTTTACGCTCGCTATAACTTTG 1326002 28 100.0 33 ............................ CATTCAGCAGTACGATAGCTGCTTCGGCTCCTC 1325941 28 100.0 33 ............................ TCAAGGTGAGACAACCATGACAATCAAGGGTAA 1325880 28 100.0 33 ............................ TAACGGTCGGGACAATATCTGGAATCCGACTTG 1325819 28 100.0 33 ............................ TCGACTGGAACTGATGTTGCCAGTCCACGATTG 1325758 28 100.0 33 ............................ TGCCAGAATACCGACAGCGGCAGAAGTACCATA 1325697 28 100.0 33 ............................ TTTTCGCACGGTAGTTTTTGAGCGTTTCTCTTT 1325636 28 100.0 33 ............................ CTAACTACGCGCCATATCTGGCATCAATCATTG 1325575 28 100.0 33 ............................ TAACGGCTGCCTTATTAATCGATTCTTGAAAAG 1325514 28 100.0 33 ............................ CGACCCGACAACCAAAGGGATTACAGACAATAA 1325453 28 100.0 33 ............................ TACAAGGTTATTAATCAACAATTCAAAGCTGGG 1325392 28 100.0 33 ............................ TACTACTGTCATACTATTCAGCTCCCTTTGCTA 1325331 28 100.0 33 ............................ CGTTTCTTTCAAGCCGTCCATTGCTTCACCAAC 1325270 28 100.0 33 ............................ TATGTCACTGATGTAAAAGGCGATTGGTCAGCA 1325209 28 100.0 33 ............................ TCTACGCTGACCCAACTTCAAAGACAGCATTCT 1325148 28 100.0 33 ............................ CTAGCACATCAAATGGCGGATGAGTTTATAGCA 1325087 28 100.0 33 ............................ CTATAAACAAAAAATATTTTATATTTTATGAAA 1325026 28 100.0 33 ............................ TCCACCTAAGAACCCGTTTGATTGGGTTAATAA 1324965 28 100.0 33 ............................ TTAGGAAGTCGTTTTCAGTTCCGTTCACATCTA 1324904 28 100.0 33 ............................ CAAGGCGCGACATATTGCGGGTCAGTATTTAGA 1324843 28 100.0 33 ............................ TTATTACGGGATAAGTTGTCTAAATATTGACCG 1324782 28 100.0 33 ............................ TTTCATGAGCTAATTGAAGTGGCATCTGTTTCC 1324721 28 100.0 33 ............................ TATAAATGCAAATACTGATCAGTGAATTTAACA 1324660 28 100.0 33 ............................ TAAATAAACTAAATAAGTCATAGCCAAATGGTT 1324599 28 100.0 33 ............................ CTGTTTATTGCCGTTGCCAAGATATAGTTTTCT 1324538 28 100.0 33 ............................ TGTCCGCGGTTTATGTTAGTGTGGTTCATTCTA 1324477 28 100.0 33 ............................ TATTCATCGCAAAAATTCAATAATGCTTTTAAG 1324416 27 75.0 0 ..GT.......A..C.....-...G..T | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.2 33 GTACTCCCCATGTATATGGGGATGATTC # Left flank : ATGAATATTTTAATAGACGGTTACGCTGGTTCTTCCCGAAAAAGACTAATTTTAGCCAAGTAACGACTGATGAGATCCTAGCAGTACTTGAACTAATTAATCAACGACCATTAAAAATACATCATCAACAGACTGCCATTGAAAGATTCCGGGCTTGTTCGGATTAAACTTGTAATTTGCCGGATCAAACAAATATTTTTTATCGACGAGATATTGGTAAGAACTCCATTTAGTTCAAAAAGGTAGAAGTAAGATTTCGTTTGAAATATTACTTCTACCTTTTTATTTGGATCGACATCTTAGAACTTTGAGTTTTTGAAAAATTTATAGACATAGATATTTAGAGTATTTTTTATTAGTCATTGAAACTATTGAAAATAGCGTTGCATAGAACAGGAAAGAAAGGTATGATTTAAGAAATTGGTAATCTTATTGGACCAGTTAATAAAAATAAGTGGTTTTCTAATTTTAAAATGTTGATCTAACAGTCTTTTCTTAGT # Right flank : TAATTAGGGCCAAGTGCTCTTTTTTATCATAATTTTTTCAGAAGTGAAATTGTACCGTAAATAGATTTAGTCATGAGCTAATTTGTAATGAGGTTAGATATTAGAAAGTAAATTTTCATTTCTTACAAGTCTAACTATATTAATAGTGGCATAATAAAGATAACGATTACATTGCCGTTTGCGTAGATAAATTTGAAAGATAATCTCTCTAAAAAGGGGAAATATTAAATGTCAGTAAAATTAACGAGTAGAGAAACTAGTTTATGGGCAAAAAAACATGTAGATGATGGGGAAATGTTGTGGCTTCCATTAGTTGCCCACTTAGTAGATTGCAGTCATGTGATGAATTGGCTTTTTTATCATTGGTTAAATGCCGGTCAAAGAGAATTGTTAACTCAGTCGGTTTCTGAAGAAGACATGCAAAAGCTAATTAAATTTTTGGGATTCTTTCATGATATTGGGAAAGCCACACCAGCTTTTCAAACAAAAAAATCTTACGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCCCATGTATATGGGGATGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //