Array 1 56756-57632 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMQC01000007.1 Bacillus clarus strain BHP DJ93.Contig34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 56756 29 100.0 36 ............................. AAAATCCATTACTGCTTTTTGATGCTGCTATCTGTT 56821 29 100.0 35 ............................. ATATTTAAAACAGCGAGTTTCATTAGCTAATTCTG 56885 29 100.0 37 ............................. TCTTTTGAATTGCATCAGAAGCCATTTCCGCATTCAT 56951 29 100.0 37 ............................. TCGGATTTAATCGGTACGAAATCTAAAGCCTGTCCTA 57017 29 100.0 36 ............................. TTTGAACTAGATTCATTTTTGTACTCATAGAAGCGT 57082 29 100.0 37 ............................. TTAAAAGATAAATATGATCGTATTTACATTGATGTAC 57148 29 100.0 36 ............................. ATAACTTAAATCAAGAGCTTTACTTGCATCATCGAA 57213 29 100.0 37 ............................. TTTGTTTTCTCTTTTTCTCCCATCCCCTTTATAAAGG 57279 29 100.0 36 ............................. AGAATTTCAACCACAAGAAAGTGCGGTACAGGTAGT 57344 29 93.1 35 .............T..............G ATTGCTTCAATCGTTGTAATACCCATGCCAATATA 57408 29 96.6 36 .............T............... TCTAATTCATCATCACCAGTTTCTTTCGTATACCAA 57473 29 96.6 37 ..................A.......... CTTATACGAATACCAAGCTTGTTATAACTCCATTCAA 57539 29 96.6 36 ......A...................... GTTAAAGTTACGTATGAGTCACCTTGGTTGCGTATA 57604 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ===================================== ================== 14 29 98.5 36 GTTTTATCTAAACGTAGTGGGATATAAAC # Left flank : CACTCCCTAGATCGTTTCGGAAGAAATAAAGAATCTATCCTTAAGGGCTGCAAAGAAAAAAGGAAAGCATTTGGGAAGACCTACAACTAAAATTACTGATAAATTCATTCTAGCCTATAAAAATTGGAAAAAAGGAAATATTTCAGCGTTTGAAGCAATGAGAAGATGTAACATGACGAGTCCAACATTTTATAGAGTAGTCAAAAGGTATGAAAATAGAGAATAACATCCCCTATAAATAAAATACAATTGGTTTCTTTTTTGTACATTTGTTTATTTCTTTAGGTTTTTAGATGTGTTACGTTTATATTGTAGTAATAACTAATTTTGCAGCGTATCTTAATAATTACGTAACATGCTAAATCTCTTGTGATTCATGGGATTAACATAATTTATGAAAATATTTATGAAACAAGACTGGCGATCCGCTGCAAAATTTGCAAACTAGTATCAATTAGATTCCTTGCTGTACAAAGATTTTATCACACTTTTTATGAGGG # Right flank : ATATTTTATTATCGTAACATTAAAAGTTTATCTGAACGTAGTGGTCAAATGTTTATTATGAGTGATCTCCCTGAGATGGTTATTGTAATCTAGGGGGACTTTTTCTTTTTTAGAATCAATACAAATATTAACATGGAATATTTATCATCTTATACTATAATTAAATATGGTTAGGAGGTTACAATAATGTCAAAGGTCTCAAACTCCCTTCGTATTCTTTTATTGCTTTCAAAAAATAGAAAGATGTCAGGGGAGCAATTAGCAAGTATGCTAGAACTGAGTGGAAGAAGTGTTCGCAAGCATATTAATGATTTGTTAATGGCGGGTTTTATGATACATACGATCAGAGGACGAAACGGTGGTTATTTCTTAGAAACAAACCCTCTTTGGAACAGCTTTTTAGAGCAAAAAGAATTAGATAAGTTGACTGAACTAGTTCGTAAGCAACTAACACTTAATCCAAATGATAAAGTTGTCCAACAATTAGAAGAAAAACTAAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 67255-68392 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMQC01000007.1 Bacillus clarus strain BHP DJ93.Contig34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 67255 29 100.0 37 ............................. ATATTCATGATTATTAAACTCAAAGTATTTCATATCA 67321 29 100.0 36 ............................. TATTTCCAACTCTTCAAAAATCCATTTCCCTTTAGG 67386 29 100.0 36 ............................. CTAGAGAAAGTGGTTGAATATTACCGTTCAAAAATT 67451 29 100.0 36 ............................. TTTTTAGTTCCGTTAGCAAGTATGGTAAACATTTCT 67516 29 100.0 37 ............................. AAAGATAATAAAGCGGCTCTTGTTTATGATTTAAAGA 67582 29 100.0 36 ............................. TTTAACATCAAAGTTGTCACGTAATAGTTTTGTAAC 67647 29 100.0 38 ............................. ACTTAATGTTACCCATGTATTAACGTGTTACGAGTAGC 67714 29 100.0 37 ............................. TCAAAACTAATCGTGAATTCAATTTCACCTTTTGCGT 67780 29 100.0 36 ............................. ACAAGTGAGATTGAAAAGCGTCGTGGGCGTTCTAAA 67845 29 100.0 35 ............................. AAGAACGAAACTATGCACCATATTTGCTGTAGAAT 67909 29 100.0 36 ............................. TTATAATAGCAGTATCAGTTGATAACCCACCGATGT 67974 29 100.0 37 ............................. AGATTATAAAGGACGAAATCAAGTTGTTGCTCACGAA 68040 29 93.1 35 A..................A......... TTATAAAGCGTACCTTTTCCACCATGTACACCGCT 68104 29 96.6 35 ............................T CTAAGCTCTCGAAGCATTCTTACATTGTTTTCTGT 68168 29 93.1 36 .......C..........A.......... CAACGAAAAGGGCATATACCTAGATGTGTAAAAAAG 68233 29 89.7 37 .G...............C..........G TGAGGAAGAACCAGAGCAAGCCTACAAAATGAACAAA 68299 29 93.1 36 .......CA.................... GCCCATACATACGGATAACCATCGTAAGGTGATACT 68364 29 82.8 0 T......C...C..A.............T | ========== ====== ====== ====== ============================= ====================================== ================== 18 29 97.1 36 GTTTTATTTAAACGTAGTGGGATATAAAC # Left flank : GTGAGATGATGTACGTTATTATTACTTATGATATTGGAGAAAAACGAGTAGGGAAAGTGTGTAAGAAACTGAAACAATACTTAAACTGGGTACAAAACTCTGTATTTGAAGGAGAGATATCCAAAGCGCAACTACTTAAGTGTTTATCTGAATTAGATTGTATAATAATATCAACAGAGGATTCTGTTTATTTATATGAAATTAATAACCCACGCAACATAAGGAAAAAAGTATTTGGGATTGAAAAAAGCTATGAAGAGCTATTTCTTTAAATTGAATCTTATAATATATTATAATTTATTAAGATTATTTTATAGTAGCAATTATTTTTGCAGTGTATCTCGTTACTGTAGGTAAATGTTAAACCCCTTGTCTCCCAAGGCTTGAATGTCATTTTTGAAAAAAATATGAAACAAGACTAACGATTCACTGCAAAACCTATAAGTTAAACACAGTAGATTCCCTGCTTTAATGAGGTTTTATTCTACTTTTTATAGGGG # Right flank : TTTTTGTTACGAGGATTACGCACATTTCTATCAAGCTAAAGCGAAATCATATCTAAAAGTACCATTAACAAAAACACTGTTCTTTGTGGCTGTCATTATTGTTCAAGGAAAAATAAGTTGAGAAAATAATATAGTTTTAAAATAGATTTTTTAGATATGTTTTAGACACGAATTTACCCTTTTACTGTACGCTGTATCAACAATATATGTATCTGAAACAGATAATTACAGAACAGTAGTAAATCAACTAATTAACCAATTCCAAGCATATAAGCATTTCTTAAAAAGAAAATTTTTATTATGCACATAATCTATCTAGATTATGTGCTTTTTTGTCGGAATTAACAGAAAGAATTTTCAGAAATGTTATAGATGTTAAGTGACAAAAAAGTTGTTTAATTTACAATAAAGTCATTTAAAAAATAATAAAGTTGTTAAAAAATGCGAATCATTCTATTTAACAATCGGGAAAGATTGTTAAATAAATTAGATCTGCTGAA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //