Array 1 515316-517794 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYXG010000001.1 Desulfovibrio desulfuricans strain AY5 NODE_1_length_1093626_cov_42.626345, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 515316 32 100.0 35 ................................ AGTTTTGGAACCAAGGGTTTGCAATCAGCCTTGCC 515383 32 100.0 34 ................................ GGTCAGGTGGGGTGCGTCGTCCCACCCGGCCATG 515449 32 100.0 35 ................................ AGATTCTCCCAATTACCTCCCTCCATGCCTGTAAG 515516 32 100.0 34 ................................ ATCTTCAAAACCAGCGAGATTCCCGTCAGCGCGA 515582 32 100.0 33 ................................ TCGCGCTGGTCGAGCATGGCCATGAGGATTTTG 515647 32 100.0 34 ................................ ATCCCATGCGGCAGCGAAAGCGGGGTCTACCTTG 515713 32 100.0 33 ................................ GTTTCGTGGATTTCCAGCGTCCCGTCAGCCCGC 515778 32 100.0 33 ................................ GCCTTGCTCTGATCGCCGTAGGGATTGAGTTCG 515843 32 100.0 34 ................................ GCGAGATCGAGGCCGCAGCGGCATGGCTGGCAGC 515909 32 100.0 35 ................................ CAGCCATAGCTATCTCCCTATTGCGCGTTGCTTGA 515976 32 100.0 34 ................................ TTGTTGGTCAGCCCTTTAGCCACAGCCGCGTCAA 516042 32 100.0 36 ................................ ACCTGTACACATTCAAAACTAGCCCATTCACGGGTC 516110 32 100.0 35 ................................ TTGATGATCTGGAAGGCCAGCGCAGCGCATGGATG 516177 32 100.0 35 ................................ CCGCAGGGCTGTAAGCTGCTCTGCTGCGGCCCACG 516244 32 100.0 34 ................................ GCAGTCTGGCATGTCCCCGGTTTGCTGCTTGGCG 516310 32 100.0 35 ................................ ATTGTGCCTTGCGGCAAGTCGTACACGCGGCCCTG 516377 32 100.0 34 ................................ AATGCCTTTGAGAATGTCCCGCAGGGTGAATTTG 516443 32 100.0 34 ................................ GCCCCGGTCTATGCGTGGGCTAGATCTGTTGAGG 516509 32 100.0 33 ................................ AAATATGGGATGACAAAGCTCGGATTCTCGGAC 516574 32 93.8 34 ....A......C.................... CGCGCCTACATCTCACCCAAACGTGGCCGCCTGC 516640 32 93.8 35 ...........CA................... ATGTCGGCTGCCAGTGCGATATACCCCGCCGCGTC 516707 32 100.0 34 ................................ ACCCATTGCCAGCGCTTCCATTGCCTTGGCAGAC 516773 32 100.0 33 ................................ GTTTCATATATGCAGGAGGGGCTTACTAATGCC 516838 32 100.0 34 ................................ AGCGGACGTCCTTCCGTTGTTAACCCAACAACGC 516904 32 100.0 33 ................................ ACCTACATCACGCGCAGGGGCCGCGCCAACAGT 516969 32 96.9 33 .........T...................... TTGGGCAAACGGACATAAGTATGCTTGCCGTCA 517034 32 100.0 33 ................................ ATTGCCTCTATGTGATTTTCAGAGAACCTGACG 517099 32 96.9 34 .........T...................... AAAACCGCCACGCACACTGGAGTCCGAAACGAGC 517165 32 100.0 34 ................................ AAGCCACAGGGCGTTGAACCCACGGCGTTGACCA 517231 32 100.0 34 ................................ CCCAACCGCGTTGAGCACTGGTGGGCGGAAGAAT 517297 32 100.0 36 ................................ GCCCGTCAACGCCGCTCCGCTCGTGAAAAGCGAATT 517365 31 96.9 33 ............-................... ACAGGCAAGAAAGCTCTCGCGTGGAAAATAAAG 517429 32 100.0 35 ................................ GACTCGTGGGCGCGCCAGTTTGGCCGCACTGTCAC 517496 32 90.6 34 ...........CAT.................. AGCGTAGCAGTGGTCGCAGCCAGGGGAGCAGTGC 517562 32 93.8 35 ..........AC.................... CACGTGCGCGTCAAGGATAGCTACGCCCATTTGCA 517629 32 100.0 35 ................................ GCGGGTTCGAGGTTTGGGCATCACGCCAGAACGCG 517696 32 100.0 35 ................................ CTGCGTTTCCTCGCGGTACTGTTCATCCCAGAAGG 517763 32 96.9 0 ......T......................... | ========== ====== ====== ====== ================================ ==================================== ================== 38 32 98.9 34 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Left flank : TGCGCCAAATAGCCCGCCATTGCGAAAACTGGGGGCAACGGGTGCAGTTTTCAGTTTTTGAATGCGTGGTTGACCCCGCCCAATGGGTCGCCCTGCGCAATAATTTGCTGGAATGTATGGATGAAGAAAAAGATAGCCTGCGTTTTTACTTTTTGGGTGCCAACTGGAAGAATCGTGTTGAACATGTTGGGGCCAAACCGTCCTATGACCCTCAAGGGACGCTGATTCTGTAAATCGACAGCATTATTACATGCGGACGGCTGAGAGAGTCAGCAGATATCCGACTGGCTGAAGGGGACTCTGTGAGCTGCTGGCAATAGCCCGCGAGAACCAGAAGCGCACAGCATTTTTCTGGGAGGTTCTCGATTTTTTAACAATATGATTTTATTACGGTAATTTTTTAAAGCAGATTTGTTTATTGCATAAATTGATCGAGATACGTGGCCTGCTCGAAAAATGCCCTGAATATCATTGCGGGGCAAAGGTAAAAAAGGGCCACA # Right flank : CTGCAAATCCTCATTGATTTTCTCGTGGCTGTAGCGTCGCTCCCCGCGCGGGAGCGACTTATGTGGATTGATATTATCATGGGCACAACCCATACATACCGCAGCAACTGGAACCATCTGTTCTGATTTATCTATTGCTTTGTTTTAAAGATGTCTTGCGTAAAATATATAACCTGTTTTGCAGGTTAGTTATAAATATTATGCTGATATTAATCCGATTTCGATTACTTGATTTTTATCCTCGTCACCATAATCCTTTCCCGCCGTCTTCCGATTAATACAGAAGCGGTATCTCTGCATTTTGCCCCATCAATATTCTCCATTGAAGGGGTTGATCTTGCAGGCAAAAATTTTATATGAGCAAAAGTGTCCCGGAACTGTATGATGGCTGCAACAATAGCAACGTATCTGGTGGATACTGTAAGCAGAATTCTACACTTGCAAAAGGGCTTGTTATGAACAGATCCATATCGCTCAAGCTGATGCTTGGCATTGCGGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //