Array 1 490272-487841 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXRB010000001.1 Prevotella nanceiensis strain SCHI0042.S.5 Contig_1_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 490271 47 100.0 30 ............................................... CTAATGAGATTGAACCAAAAAGGAAGAACA 490194 47 100.0 30 ............................................... AAGAAGATTTATTTCTGTTAGGAAAATGGA 490117 47 100.0 30 ............................................... GAAAAGCGAACCGTAATTCAAGCAACAGTA 490040 47 100.0 30 ............................................... TTTAAAACGTCTTTCAACTTTGGAGAAAGA 489963 47 100.0 30 ............................................... TCAGAGTTCTGTGCCAACACCACAGCACCA 489886 47 100.0 30 ............................................... ACGATAACTATAAATCAAAGAAGTGTTATT 489809 47 100.0 30 ............................................... TTTAAAACGTCTTTCAACTTTGGAGAAAGA 489732 47 100.0 30 ............................................... TCTTTTCGCCTCCATTCGTTCACCGTGTAA 489655 47 100.0 30 ............................................... TCACCGCAATTACCTAAAAACACGCCTAAT 489578 47 100.0 30 ............................................... GCGTGGTTTCGTTGGAAATACCCGAAGTTA 489501 47 100.0 30 ............................................... TTTCTATCACGTACCTCTAACATCTTTTTA 489424 47 100.0 30 ............................................... TCAGAGTTCTGTGCCAATACCACAGCACCA 489347 47 100.0 30 ............................................... ATTTCAGCAGCAATTATAGGCACAGTTCTA 489270 47 100.0 30 ............................................... AAATCAAGGGGCAAGTCCTTAACAGCCGTG 489193 47 100.0 30 ............................................... TGTGTCGACGCCTAGGACCATATCACCGAA 489116 47 100.0 30 ............................................... GGATATACTATCAACGTGTGCTATGACCCA 489039 47 100.0 30 ............................................... TAAAGAGCCACCAACACCGACAGCTTTGTA 488962 47 100.0 29 ............................................... AAGTTGATTTAGCTGCGAATTCAAAAGAA 488886 47 100.0 30 ............................................... CTTTGCGACTATTGCTGTCTTTGCCAAAAA 488809 47 100.0 30 ............................................... TAAAAATGTCGATTGAAAATAAAAGAGCCT 488732 47 100.0 30 ............................................... CACATTGTCTTTTCCAATGGTCATAACCAA 488655 47 100.0 29 ............................................... GTTTTATAAAATTGCACCCATTCGCGCAA 488579 47 100.0 30 ............................................... GTTAAAGTCACATTCTTGGTGAGCCCAATA 488502 47 100.0 30 ............................................... TGACTTTCTCTACGGTCACGCACCTTATCT 488425 47 100.0 30 ............................................... CTCGTGTTGCCCTTTTTGTTTAAATTTAAT 488348 47 100.0 30 ............................................... GACGAGAAAATTTGCTTTAACGATTAACCC 488271 47 100.0 30 ............................................... AATAAAGCTATGATTTTATGCGAGAAGGTT 488194 47 100.0 30 ............................................... CCTTAAAGCCGTAGCAACGAGTCCAGAGCC 488117 47 100.0 30 ............................................... GGCACGGCAAAGGTTTATCACCTACCATTT 488040 47 100.0 30 ............................................... AAGTATTGGTCATCACTCTGTTCGTGTGCT 487963 47 100.0 29 ............................................... AAGAACATAAATATCTTTTCTTCAGGTTC 487887 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 32 47 100.0 30 GTTGTTATTTGCTTTAAATTTAGTAACTTTGCTTATGCAAATACAGT # Left flank : TTCTTACTTTATAATGATGTCTAAATAGGCTGTTGGAGTTGCGTACTTTATGAGTGAAATCATCATCTATATGTATTCTGTTTTAGAGTTTTATAACGTAGTTTCTTATCAGTTATTTTCTGTTTAGGTTCATTCTTGATTGTAAAAGAATACTTCAACTTATCTTTTTCATTGTTGAAAAAAGTATGTTTTATTGTCGAAGTAATTCTTTATTTACCACTTTCATTTTCTACTCTTATTAAATATTATTTCCATGCCATTTTCTTTCAAATTTAAAAGTACTGCTTTTGATCTTTAAAAGCATTGATATTAGAGGGTAAAGGCAATGTTATTGCGATGTAAAAGTTATGCTTTTATTGAGAGGAAGAGACCATATTCATCTATAACTATTTACCACTTCTTTTATGATGAGTATAGAGTAGGAGGGAAGAAGAGAAAAAGGTTTGATGAATTTGGAACTATTTTGATGCTTATATAGGAATTATTTAAGGTGCTAGTGC # Right flank : TTGAATTGAATAAATTACTGATAGTAAATGCATTGCAAAGGTGTTGGAAAATAAAAAAACAACAAAAAAGTTCTCTCTTGATCTAAACAGAGAGAACTTTTTTATTTAGAACATTTCAAGTTGAATGTTAGGAGTTTTGATTTCTTGAGGCTTACATCCAAAGAATAATTCCATTTTTTCGAATTGTTTATCTGTGAGTGTAAGTATGCCTATTTTCCCAAAGTTAGGCATAAACGACTTTACTCTTTTGATATGCGCTTCAACATTTTCAATACTAGAACACTGTCTAATGTAGATTGAAAACTGGAACATTGTAAAGCCATCTCGCATAATATTTTTCCTAAACTGTGCATAAGCCTTGATATCTTTTTGTGTTTCGGTTGGTAAATCGAAAAGTACAAATATCCACATAACTCTATATTGACTTATTCGTTCATATTGTTTCATAATAGAATTTATTATGATTTGTTTATTTTATCAGTATTCTCCAACATCTATAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTATTTGCTTTAAATTTAGTAACTTTGCTTATGCAAATACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.47%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //