Array 1 38962-37432 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIJQ010000053.1 Thiorhodococcus minor strain DSM 11518 NODE_53_length_39062_cov_23.7928, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 38961 37 100.0 34 ..................................... CACGGCTTTATGTGTGAGGTGTACATCGGCTATG 38890 37 100.0 34 ..................................... TCGACGATGACATCCCATTCGATCTGCGCGAGCG 38819 37 100.0 34 ..................................... CGTGTGGAGGTAGACGAGCGTCTCGCCGTTGCTT 38748 37 100.0 35 ..................................... TCTCTGTTGACGCGCCATGCCAAGCGCATCTCCAG 38676 37 100.0 34 ..................................... CGTCAGTGTTGTCCGGATTTGTCATGTTGTAGGT 38605 37 100.0 35 ..................................... CGCACTCCGGCAAGCCGTTTCAGTGCAGCCCCTCG 38533 37 100.0 34 ..................................... CATGAACCGAGGACAATCATGCCGGCTCGGCGAT 38462 37 100.0 33 ..................................... GGTGGCTCGCTGTCGTCGTCGAAGAGCGGCACT 38392 37 100.0 34 ..................................... GCACCATTACCCAATCACTTGGCGATTCATCGCC 38321 37 100.0 35 ..................................... GTATCGTAGATGTCTCGTATCGGTTTAGGCCAACC 38249 37 100.0 34 ..................................... TTGGCCTTCCAGCGCCCGCGCGCTTGACACCTGT 38178 37 100.0 34 ..................................... AGCTGCGGCCGACGCGACTCATATGACTTCACTC 38107 37 100.0 35 ..................................... TGCTCGATCAGTTCCGCCTGCGTCTGTGGCTGCTC 38035 37 100.0 34 ..................................... TTTCCTTCTCATGCGCGCCTGCCGTTGGGCGGCC 37964 37 100.0 34 ..................................... AGGTTTCTCTTACCTGATTGTCAAAGATCTGACC 37893 37 100.0 34 ..................................... TGCGGGTAGCCGCCGGGATGACAGAATGCGACCC 37822 37 100.0 36 ..................................... CCAGCCCCTGCCTAGCGGGGCGTCCGACCGCTGGAG 37749 37 100.0 34 ..................................... CAGGGTGAGGAACGACATGTAATTCTTCCGCAGT 37678 37 100.0 33 ..................................... CGGCGCAGGAAGGGCCGCAGGTCGGTGATGTTG 37608 37 100.0 32 ..................................... CGGGACTCGGGAGGATGATGCGCTCCCGCTCG 37539 37 97.3 34 ...................................G. TGAGCCTTCTTCGGCGAGTGCATTGACCAATCGC 37468 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ==================================== ================== 22 37 99.8 34 GTTCGAATCAGAGACCCGATCTAAAGGGGATTAAGAC # Left flank : CCCCCGCGACCTCGCCCGCATCTTCTTACTTCATCATACCAGACCCCCGCTCAAATGGTGAATAAGCCTCCGTGCAATAGGCCTAAGCGCGCGTAATAGG # Right flank : GCGCTTCAAATCCCGCGCACTGAGCGCGGGAGAATGCCGGAGGGTGGACAAGCGCAGCGCAGTCCACTAGCGCCGGCGCGGGCTAGGCTCGATCGGCGGGGCCTTTCACCCGCTGGGTGACTAAGCCCCACTCCGCAACACATTCAAGTCATTTGCTCTCTTCGTGCCCTTTGCGATTCAGCCGCTCTTTTCAGGCTCACGGTCTCGCGTGCTCGTTCGCCCTACCTGTTTTGGATACGCAGTGTGCCGCGCACCAGGGCAAGCTTGCGCCGGGGGCGTGGACCGATATCCGGTATGCGTGGGTGCTCGTCGCGGCGGGGCGCCGCTCCCACGAGAGCGCGGCGAGGCGCCGCTCCCAACTTGTGGGTGGTGTCCTGCGCTCGCGGGGACGAGACAGCCCGCCAGTGGCGGGCTCTCGACACTTCAAGCGGCCAGGCGGCTAGGAATCGTCCGTTGCCTCCGCGACCTCGCCATAGCGAATCGCCTCCGCCTCGAGCTTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGAATCAGAGACCCGATCTAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 7305-7980 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIJQ010000140.1 Thiorhodococcus minor strain DSM 11518 NODE_140_length_8014_cov_21.1939, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 7305 37 100.0 34 ..................................... TGAAGGTAGAGCCAGGACTCGCACTTCACTTTGG 7376 37 97.3 35 .........................T........... GATCGCCGTCTTGCCGGCGTCGTAGAGCTCCCAAT 7448 37 100.0 34 ..................................... CACTCCATACAAAGAGCACGGAAATTGGAGCTGA 7519 37 100.0 35 ..................................... AGTTTGGTTGTAAAGGGTGTACATACTATTCCTCT 7591 37 100.0 34 ..................................... GTATTACCGCGTCCTTCGTGCACTGGAACCTTTC 7662 37 100.0 33 ..................................... TTGCTTGACGGCGAGGTCAAGCATGGTGTCAAG 7732 37 100.0 34 ..................................... CGCCTTGCGCCTTAAGGGCCACATAACGTCCCCT 7803 37 100.0 33 ..................................... CAAGTGCCAAGGCATAGTCATTAGTACCAAGTG 7873 37 100.0 34 ..................................... GTGGTCTCCTTGGGAGGTTGGTCGTGGGTCAAGG 7944 37 91.9 0 ...AC...............A................ | ========== ====== ====== ====== ===================================== =================================== ================== 10 37 98.9 34 GTTCGAATCAGAGACCCGATCTAAAGGGGATTAAGAC # Left flank : GGGCGAGGCGGACAACCATCCGGCCAACGGCCTGCTGCTGCGCGCGGATCTCCACCTCCTGTTCGACCGTGGACGCCTCGGCATCGACCCGGCCACGCGCCAGATCCACCTGCATCCCGAGGTCGCCAGCGACCCGCACTATGCCCCCTACCAAGGCGCCCAGTTGGACACCCCGCATCACCTCTCCGAGCCTGCCCTGCAAGTGCGCTGGAGCTGGTATCGCGACGCCGTGGCCAGCTAGCCAAGGGGCTAGCCGGGCGCCGCGCGCATCACCGCGCTCGGCACCCGCGGGCCGTCCCTCCCATGCCCCGCGTCTGTCCGATCTCACGCATTGTCCCCGCACCCAAGCTGGGGTAGCCTCTGGCATCGAGTCGAGCACGCATCACAGCTACGGAGGTAACGCCCGTGACCGACTTCTGCACGTCAACTTTCGCGACTTCGAAAATCCTGGGAACCCCCTTCGCAAGCCATTGTTTCAAAAGGCTCCCTGGCGACGAGCG # Right flank : GCAAAATGACGAGCCAATTATTCAGGGCGCGCGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGAATCAGAGACCCGATCTAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 145818-138236 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIJQ010000003.1 Thiorhodococcus minor strain DSM 11518 NODE_3_length_147756_cov_26.4835, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 145817 36 100.0 35 .................................... GACGACGAAGCCGAGACCGCCGACGAACTCCCTCT 145746 36 100.0 35 .................................... TTCCGAATCCGGATCTTATGCTCGCCCCCGTCCGA 145675 36 100.0 36 .................................... GGCCGAGGCCTCGGACCAGCTCGACGAGTCCGCGCA 145603 36 100.0 36 .................................... GCTGTCGCCATCTTGATCTCCCGAAGGTTTCACGTG 145531 36 100.0 36 .................................... GGAAGGGCAAGGAAGGTCAAGACGGCCCGGAGACTC 145459 36 100.0 37 .................................... GCCGCGCATAGGCCGGGGCCGTCAGCCGGTCGGCGTC 145386 36 100.0 38 .................................... TTCGCGCACCACGCGGGTCATGATGGTGCGCAGCTCGT 145312 36 100.0 37 .................................... GCTAGGCTTGAGCGTCCTGACTGGAGATCTCGACATG 145239 36 100.0 36 .................................... CCAGGAGGGCAACGACGATGCCAGCACCTGAGCTAG 145167 36 100.0 36 .................................... CAAGAATGCCGGGGCTTATCCGGATCGCATCCTGAT 145095 36 100.0 38 .................................... ACCACCTCGGTGCCCTCGACGAAGCGGCGCACGTTGAA 145021 36 100.0 38 .................................... AGTGAAAGCACCATGAAAAAAGTGTTCGCCATCACATC 144947 36 100.0 36 .................................... CGGGTGCGGGCCGGTGCGGGGCGGGCCTGGCATGAC 144875 36 100.0 36 .................................... CTCGCTCCCATCCCCATCCCCCTCGGCCTGCAACTT 144803 36 100.0 36 .................................... GCCCCGATCCTGCGCCCCAGCAACATGACGCGCGGC 144731 36 100.0 38 .................................... ACGGAGACGCCGAATGGTGATCGGCACTTCAAGTGTCC 144657 36 100.0 36 .................................... GTTCAGCACCCCGCGCACAAGCGCCCCTTCCGCCCG 144585 36 100.0 38 .................................... CACAACAGCAGCGCGAACGCGGTCACGGTCAACGCCAC 144511 36 100.0 35 .................................... ATCTCCCCCTGGTCGAACCCGGTAAGCGTCAGGTC 144440 36 100.0 37 .................................... GCGCACGTTCAGACCGCCCAGGCGGTCGCGGACCTGC 144367 36 100.0 37 .................................... AGCGAGGCGATCCCTCGGGCATTCGCGCGCGCTCCGG 144294 36 100.0 37 .................................... ATGGGCTGACCTGGCCGACGCAGTACAGCGACCCCAT 144221 36 100.0 36 .................................... TCAGGGGAGATCAAGCTCCAGTCCATCACCCTCTAT 144149 36 100.0 38 .................................... CCCGGGATGCCGTCGACGGCGAGCCGCTGGGACTGTTG 144075 36 100.0 38 .................................... TCCACTGTCTTGAGATAGCTCACCCCGAGCACGTCCAT 144001 36 100.0 36 .................................... CGGGCAAACCTATAAGACCTTCATGCGTGCAGGCAC 143929 36 100.0 36 .................................... GCCGCAACGCCGCGAGCGGCAGACCCGTCCTGCTCG 143857 36 100.0 36 .................................... ATCCTCATGCTCTCTGAACTAGAAGTCGACAAAGTC 143785 36 100.0 36 .................................... GGTGTGCAGATGGAGCTGTACCTCCTGGCCCGCCTC 143713 36 100.0 37 .................................... GTGACGTGGTCGGTCATCATTGCATCACCTCCTTGGC 143640 36 100.0 35 .................................... AGCCGCCCGGTGTTCACTGGCCGCTCCCGCGCATC 143569 36 100.0 36 .................................... ACCCAGTCCCAGGGGCGAGTAGAGGGCGTTGATGTG 143497 36 100.0 35 .................................... GATGCCCGGCGCAACCGGCGCGGACGCGGCCACCG 143426 36 100.0 37 .................................... CCAGCGCTTCGGCACGCCCTCGATCTGACACCGCACC 143353 36 100.0 38 .................................... TGCCGGAGCCGCGCAAGCGCATCCGCTGGATCACGCGC 143279 36 100.0 35 .................................... CAGGCCGGCCAAGAGCTCCCGCGTACCACGGGCGT 143208 36 100.0 35 .................................... CACGCGAAGAAGTACGGTGCCCGCTGGGACCCGCA 143137 36 100.0 37 .................................... ACTGCATGCCTCGCTTCTTTTCGCGCTGGTAGCCAGG 143064 36 100.0 36 .................................... TCAGAGACCTCAGGGAGATCCTCATCGCGGTAGCGT 142992 36 100.0 36 .................................... CCCGTAGACGACGGTATAGGCGGTCTGTGCTTTGTC 142920 36 100.0 36 .................................... GGGCATGCCGCCATCTCCTGCGGCTTCCCATCCTTG 142848 36 100.0 38 .................................... TCCACGAAGCGCTGAGTCTACCAACCACGCACACACCA 142774 36 100.0 36 .................................... GTTCACATCGAGCACTGAGTTCCAGGTCATTGGCGA 142702 36 100.0 37 .................................... TTCCAAACGGGATGCAGTTGTACCAGGCTGCTCATCC 142629 36 100.0 39 .................................... CAAAGAGCGGTATGCTACGGAGGGCGCCGTCGGCTGCGC 142554 36 100.0 38 .................................... CGCGGGTTGGCACGCGGATCGTCCTGCAAACCGACAAG 142480 36 100.0 36 .................................... GGGGATTTCCCGGCCATCTCCCAGGCCATCACCCTA 142408 36 100.0 36 .................................... CAGATCTCCGGCTCCGACATCGTCGTCGGCCTTTAC 142336 36 100.0 36 .................................... GGCCTACTGCGGAGAGATTCCGAGCGCCAAGCCGGG 142264 36 100.0 40 .................................... AATTGGCGTGGCCTTGGAACTGCCCTATGAGGTGCTGACA 142188 36 100.0 36 .................................... GGCGGGGATGGCTCGGCTCAGCGCAACAGTGACGGA 142116 36 100.0 37 .................................... CAGACACGGCGCTCGCTGCGCTGAAGAGGAAGAAAAA 142043 36 100.0 37 .................................... TCAAGAAGGCGGCCGTCAAGGCACTGGACAAGCAGAA 141970 36 100.0 36 .................................... CCGAGTCCGAGCGCCTGAATCTGATCGCTCAGGAGC 141898 36 100.0 36 .................................... CCGGCTGTCCCGGTCGGTCGCGACCGGCAGCCCCTG 141826 36 100.0 36 .................................... GCAGATATACAAGTTTGGGTCACGTTCAATCAACCA 141754 36 100.0 37 .................................... GACGCCATGCTGAGAGCATGAACGCTGTCCAGCTCAT 141681 36 100.0 35 .................................... GGTGCTGCCCTGCGCGCACTGCGGCGATATCGATC 141610 36 100.0 36 .................................... TGGGCGTCAATGGCGCTACTTCATCGTGGTCTAGTA 141538 36 100.0 36 .................................... CAAGAGCTGGAGGCGGTTGATCGCACAATCGCACAG 141466 36 100.0 36 .................................... GAGGGGGTTTGGGCGGTTCCACAGATGGACGACTAT 141394 36 100.0 36 .................................... GCTCGCGGCGATCCAGCGTGTGACCTGCAGACAGGT 141322 36 100.0 36 .................................... GAACGGCCTCCGGGCGGCACTTCGCACTACGGCCCA 141250 36 100.0 36 .................................... GAGCGTGGTCATCCAGGATGTCAAGCAACTCCTCGA 141178 36 100.0 36 .................................... AGCTGGGCGCCTGTTGAGCGGCTGTTGCAATCCTTG 141106 36 100.0 36 .................................... TGGCAGAAACGGATTCCTCGCCCCACCAGCTGTCGC 141034 36 100.0 38 .................................... TCCTTGGTGTGGGACGTCTCCGCAGGCGCCTTCGACGA 140960 36 100.0 37 .................................... CCCAGCGTCAAGCCCGATGGCGGGAGCGGATAGCCGA 140887 36 100.0 37 .................................... TTGTCGGCGCATCGGATGATTCTGCGGCCGGGGATGA 140814 36 100.0 38 .................................... CCCTTGGCTTGCTCAGTGTGCGCCACGTGCTCGGATCG 140740 36 100.0 35 .................................... AAAACCGATGACGCCGCATCCCACGCCATGAACGA 140669 36 100.0 36 .................................... GGGGATGCTCTTGACCGCAATCAGTACGGCACGCTT 140597 36 100.0 36 .................................... GAGGAGAGAGGAGAGAGGAGAGAGAGAGTAGGCCCT 140525 36 100.0 36 .................................... CCCCGCTGTCCCCATAGGCAGTTAGGGCACCACTGG 140453 36 100.0 36 .................................... CGCCACGCAACATTGCTCAGAGCATTGGCGGGCTCC 140381 36 100.0 38 .................................... GATCACGCCAAGTTCGCCTCGATCATGGTCAACACAGT 140307 36 100.0 39 .................................... AAGAACGTCTATGGCACCGGCTGGGCCGTGGTGAAGGGC 140232 36 100.0 37 .................................... GGCGGGAGGCGGTTGGTTTACCTGGGATTACGCGCGA 140159 36 100.0 35 .................................... CACACGCAACGAGGAAAGAATCGCCCACCACATGG 140088 36 100.0 37 .................................... TACTGCCCGGTCGCGTCAACGCCCAAGGCCTGCGCGT 140015 36 100.0 38 .................................... GGAGTTGCAGCAAACCACGGCATGCCTAACAAGTGGCG 139941 36 100.0 36 .................................... CGTGCTCCCCTGCGCGTAGTCAAGGATGTCGGCCTT 139869 36 100.0 40 .................................... TCGAGCTTGCGGACGACATACGTCTTATCCACCAACTCCT 139793 36 100.0 36 .................................... GCTCGGCGCCTTGACCGCATTCACCACGATGTCGCT 139721 36 100.0 37 .................................... CCTCGCATCGGATTCCAGGGCACGCCTCACTCACCGC 139648 36 100.0 35 .................................... AGCGCCGCACAGGACGGCACGCAATCCATTAACGC 139577 36 100.0 38 .................................... CAGGTGCTCGATACCGAGATTCGCGGCGCCAATGGCTC 139503 36 100.0 38 .................................... CGGATGGCGCCGCTGATGCGGTGACCGCAGCCTTCGCA 139429 36 100.0 36 .................................... TCGGCAGTCTCGGCAGTCTCGGCAAGAGAGAGAAAA 139357 36 100.0 37 .................................... ACTCCGGTGTTATTTACGACGGCTTTGGGTCGACAGC 139284 36 100.0 38 .................................... CCGGCCTACATGCTGATGATGTCCTGGTGATCTACGAC 139210 36 100.0 35 .................................... GACCAGCTTGACAGGATGTCGCGCTCCATCCGCAT 139139 36 100.0 36 .................................... CGGGCTGCGCGGGCTGGCCTGGAAGTGGCGCGTGGA 139067 36 100.0 35 .................................... TCTATTGCCGAGACTGCCGAGACTGCCGATACCTA 138996 36 100.0 37 .................................... TCAGGACTCACCGCACATGCGCTTGGCTAGACCAATA 138923 36 100.0 37 .................................... CCGAGGGGCTGCACTGAAACGGCTTGCCGGAGTGCCG 138850 36 100.0 36 .................................... CGTGGGCGTTACTGATGGGGCTCGAAACCAGCGACC 138778 36 100.0 37 .................................... AGCCGAGGCCGAGCGGGCTGTACAGGGCGTTGATGTG 138705 36 100.0 36 .................................... CGGGTCTCATCATTCTGCGACGGCAACGCAACTTGC 138633 36 100.0 37 .................................... TCGAAGGTAAAGCTTCGTCCTGGCGCGCCGTAGAATG 138560 36 100.0 39 .................................... GGCGCGCTGGTGTGGGACAAGACCATCGGGGCATGGGTC 138485 36 100.0 35 .................................... CCGGCCGCGTTTGACCACGGCCGCGTCGAAGACGA 138414 36 100.0 36 .................................... GACGCTGAAGAGGCTGGACAATGCATGAGCGGCTGC 138342 36 100.0 35 .................................... AAGCCTTCACCACCTGGACCAACGAATTCAGCCCT 138271 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 105 36 100.0 37 GCTTCAATGAGGCCCTGGCGAATAAGCCAGGGAAAG # Left flank : TGGATGCCAAGACCAAGAAACAGCTGGTCACCACCCTTGCGGAGCGGTTGGGTGTCTCCACCGAGGCTCACCAGTCCGCAAAGCCGCACCTGATGTTCTTTCCGACCGATCCCGTGCGCTCACCCCCACACCGCATCCTCGCGGCGGTGCGTGAGCAGGGCTACCAGGCCCAGATCGTCGATCTATGAGCCTGAAGATCGGCGCAATCGCACAGCCTCTGGGAACGACGGTGCGAACCCTGCGGTTCTACGAGGAGAACGGCTTACTGCATCCCGGCCGCACGCCCGGCTTCGTGATGCCAATCTCCTTTTACCACGGCTTCGAGGTGCCGCTCGATCAGGCGTCGATCATCGATTGGCCCAACCTCCGGCTGTAGGGTGGACAAGCGCAGCGCAGTCCACCAACACAGGCGCGGGATTCGGTGGACTTCGCTCTCGCTCGTCCACCCTACGGGTCCAACTGACGATCGAGGCCCTCGATCACCTCGGCCACCACCCCCG # Right flank : GGACTCCGTTCGGGGCCAGCAGGGACGCGGTCAGCGGTGGAAGCCGCGAGACCTGAGCGGATGCTCGATCAGGTGTGGCCGCTGTCTGCTCAGACTGCTTGAGCATAATCTTGAAATTCACTGATTGTCAAAGAACTTGGTGCTGCGAGCGCTACCGGGCTTTTTGTCGGCACACGAGCGCTCGCACGCATGGGGCAGCGGTGGCGATGTGCATTGGCGTTGGCTGAAAGGGCGGTCTTGTTGACGCTGGATTCAGACGATGATCGGGTCTTGCTCGATTGGTGTGAAGCCCGTTTTTCCTAAGCTGACGACGCGAGGCAGCACATGGTCTGCCTGCCCGAAGTCGAGCGACAGAACATGATCCTCCGAATGGTGGATGATCCCATCCAGCAGCGCGATGAGCTCGGCGTGCTGTTGAGGTGTGAGCCTACACTGAAAGACCGATAGCTGAACCCATTCGCCGAACCCTTTCATGAGCTTGAAGACCCGGCGCCAGCGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCCTGGCGAATAAGCCAGGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.60,-11.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //