Array 1 1120-2274 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPE010000048.1 Dorea formicigenerans strain DFI.1.230 MENCGIBP_48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1120 36 100.0 29 .................................... TGGCTCAGGGTGGCTCGCATATCCGAAGA 1185 36 100.0 30 .................................... TGTCAAATATATTTCGTAACTTTTTCAACT 1251 36 100.0 30 .................................... CAGTACACACCGTTTTCCACGCGACCCTCA 1317 36 97.2 30 .........................A.......... TAAATGGGTCATGCATATATAAGTTGCTGT 1383 36 100.0 30 .................................... ATTTTCCACAGACAATTAATCCGGCAAACA 1449 36 100.0 29 .................................... TGGCTCAGGGTGGCTCGCATATCCGAAGA 1514 36 100.0 30 .................................... CCTGCTACATTACTCTACAATCACACTTTC 1580 36 100.0 30 .................................... GGGCGAATATACCAATAATTCCCATGATAC 1646 36 100.0 30 .................................... CTTGCTACAAGCCATAATTTTGCATCTGTA 1712 36 100.0 30 .................................... AACCCTGTTTTGTAATAATTTTCAACATCA 1778 36 100.0 30 .................................... CTTTTACAAGCCATACTGGATATACGGTAT 1844 36 100.0 30 .................................... TAACATATGCCCTGATACGTATCCACCGCC 1910 36 100.0 30 .................................... GTTAGCTTCCGCTTGCAGTCCTCTGATGTC 1976 36 100.0 30 .................................... TCGCCTTTGTTGAATCCTCATAGGCTTTCT 2042 36 100.0 30 .................................... CTTTTCTAATCATTTGATAGTCCATAATTC 2108 36 100.0 30 .................................... ATACACAAGGAAGTAATAAAAATGGTATTA 2174 36 100.0 30 .................................... GACCTCGCTCGGCTTAGTCTTCGTCTTCCC 2240 35 97.2 0 ............................-....... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.7 30 GTTTGAATTCCTTCCGTATTAACAAGACTCTCAAAC # Left flank : CTCATATGCAAATGCCACGAATTTCTCAATAAGCCTCCTTATAATAAATTAGATTATGATAAATTCATTTATATTACATATTCATTTACCAGGAAGTCAAGGTCATTCATGAGATCTGTTTATAATCCAGCTATTTTACAGAAACCTCTAAGAATCGCACAAAGTTATTCTAAGTCGCCACTGTCAAATCACTTTGATTTTCTTGAGATAGCTGACAAGATTCTGCCATACTACAAGGCATGGTATGATTCCTGCCCTGAATGTGAATATTTACTTCACACAGAAGACTGAAAGCATTTTGAGTACCGAAACTACTATGATAGCTATTTCAAGCCACTTATGGAACAACTTAATATTAATCGTACACCACATTGCTGCAGACATACATGTATATCTATGTTGGCGGGAACTGGTATTAATTAGACGATTATCAAAAAGATTGTGGGACACTCTAGTGCTATGACACTCACAGAGAAAATATATACACACTTTAATAAGTG # Right flank : CCTCAAATCCGGTTCTCGCCGAGTCGTTATCTTCTTACGATAGAAGGTTGTTAATACACAAGGTCCAGCACACAAAGATCTTTATCTATAATAATATATCTGTCACTTTCGATGGAGTCTGATTTTACTCCTTCCAGATTAATCAGATACATCTTCGTATAAAAACAGTGTTTATAGATTTCTCTCAGATCCTCGGTACTGAAATATTGCTTCAGATTCAACACAAAAACAATATCAACATTACAGATCTGCTTCATGGTTCTCAGATAGTCTATAAACTTTTCAGTCAGATTATCATAACAGGAATCCATATGTACATTACAATATTTTATCAGACCTGCTGCCTGAAAATCAACATCATATGTCAAATTATATTCGGAAGAACTCGTAACCTTATCCATAAACTGGATAACCTTCTGATTCACAGTCGCAAATTCTTCAAAATGATCTTCCAATATTTTTTCTGAAAGATTTTTATAAAGCTGAGATAGAATCCTTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATTCCTTCCGTATTAACAAGACTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //