Array 1 104721-97372 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGQAL010000008.1 Shewanella algae strain LZ2013652 NODE_8_length_140844_cov_192.791631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 104720 28 100.0 32 ............................ TTGAGCAGCTAAGACAAGCCAATCTTAACGAG 104660 28 100.0 32 ............................ GCATAGTATGCGAGCATCACCATTGGTATTGT 104600 28 100.0 32 ............................ CCGCCTACCGACATTTCAGACTCACTCTCATC 104540 28 100.0 32 ............................ AATAACGAGTGACGCAGTTTGAAGAGATGCCT 104480 28 100.0 32 ............................ AGAGCAAGTCAGCGCCAAAATGCTAGAGTGGG 104420 28 100.0 32 ............................ TCAACGTGCACAAGTTCTACAATAGATACCGA 104360 28 100.0 32 ............................ AAACCCATTGCTACCGATGCAACGGCACCGGC 104300 28 100.0 32 ............................ AAACCCGGATACCCAGCGCCTGGCACTGGAGC 104240 28 100.0 32 ............................ TTGTTCGCGACTGCCTAGCATTTGCATATTCT 104180 28 100.0 32 ............................ AAATAGCGTTGTTGTTTGTGCTACAGGGTCTA 104120 28 100.0 32 ............................ ATTACCCTGGTTAGACGTGTTACCGTAGACTG 104060 28 100.0 32 ............................ ATTATTGCCGAGCAGGTGTTTAACAAGAATAT 104000 28 100.0 32 ............................ AAAACCATCGATGACGAGTACAAACGTCGTTA 103940 28 100.0 32 ............................ ACTTTGATGAGATAGTGAAAGAGTCACAGAAA 103880 28 100.0 32 ............................ GTCACCGAACAGTAGCTGGTTAGCAAGGTATA 103820 28 100.0 32 ............................ TTTGGCGTATACGATGGAAGGGTTTGCCGCAA 103760 28 100.0 32 ............................ TGCTGGCGCGTCTCGTGCTCGCACTGCTGCTC 103700 28 100.0 32 ............................ TAAGCCGCCAGCGCATTACAATTGCCGCTCCA 103640 28 100.0 32 ............................ TAATGCTGGGGGCGGCGGTGCAAACAAAAAGT 103580 28 100.0 32 ............................ GCACAGCAAAAACAAGCCGAGGCATATCTTGA 103520 28 100.0 32 ............................ ATCAAGCCAAAACGAATAGTGGCCAATATTAT 103460 28 100.0 32 ............................ ACAACTTCCCAGCCTTGGCCGTCCATGAAATC 103400 28 100.0 32 ............................ AACATCCGCGAAACCATAAAAATCCCTGAAAC 103340 28 100.0 32 ............................ TGCCGACTCAGTGGCGCGAAGTATGGCCACAA 103280 28 100.0 32 ............................ AGACCCAGGCGTCGCTTGCCAGTCTATGGACG 103220 28 100.0 32 ............................ TTCTCAAATATTATTTCGTTGTACTCAGACAA 103160 28 100.0 32 ............................ ATCAACCGCCCACCACCGGCGACGAAAATATT 103100 28 100.0 32 ............................ CAACGTCGCCCCATGTGTTAAACACGTCCCAA 103040 28 100.0 32 ............................ ATTTATTTTACCTCTCGCATTTCAAATATTGC 102980 28 100.0 32 ............................ AACAGAAACTGGTATAGTGTATGACGCTTCGT 102920 28 100.0 32 ............................ TGCCGAGGCAAGCCACCTTGCACCTGCGACCT 102860 28 100.0 32 ............................ GCAAGTGATAGACCGCAAACAGTCGCCGGATT 102800 28 100.0 32 ............................ AGTAGCGCCCAGATGTATGTTATTCCGCAAGT 102740 28 100.0 32 ............................ AGAAGATACCAATCCGAAGTTGCCAGCCCCCC 102680 28 100.0 32 ............................ TAAAAAACCGTTTGCCAAGAATAAGCAGATTC 102620 28 100.0 32 ............................ TAGTCGGCCAATAAATTGACATTGATTTAAAT 102560 28 100.0 32 ............................ GCTAGGCATGTATCTCATTTCTGGGTCTTGGC 102500 28 100.0 32 ............................ ATAGTACCCAATCTTTTGCCCCAGGTAATAAT 102440 28 100.0 32 ............................ TGTTGTGGCTTAGGCGCATAACCTTGCTGCGC 102380 28 100.0 32 ............................ TTCTCGATAACGCAATCGCTCGGCCACGGCGC 102320 28 100.0 32 ............................ ACGCGCAACGTAGTAGTAGCCATACTGAAACT 102260 28 100.0 32 ............................ AATATTAGAACTGCGATGATACGAGTAAGGAG 102200 28 100.0 32 ............................ ATTTGGATCACGATTCCCGCCAGCTCCGCCGC 102140 28 100.0 32 ............................ TTGAATGTCGGAGTGGTTTTAAATGGCCGAAG 102080 28 100.0 32 ............................ AAACAAAGACAAAGTGCTGTCTGTTGTGGCCC 102020 28 100.0 32 ............................ TCCAGATCAAGGTAATCAACAGTCTGGTAAAA 101960 28 100.0 32 ............................ ATCAAGACTGTTGTGAGATCTGACATGCACAA 101900 28 100.0 32 ............................ TTTGCCCTGGTTGATGTCCTGCGCTTCGTACT 101840 28 100.0 32 ............................ GCATAAAGTCGTAAGCGATTCCGGTGTACTCA 101780 28 100.0 32 ............................ ATGAATAGCGTTCTGAATAGTTCGTTAGTCAT 101720 28 100.0 32 ............................ TTAAAGCGCTAGAAGTTAATAACAGATTCACT 101660 28 100.0 32 ............................ TTCATCGCTATGCCTACCAATCATCAAATACG 101600 28 100.0 32 ............................ TGACTCATTCATGACAAAGCAGCTCAGCCATG 101540 28 100.0 32 ............................ TTTTCACAGTTGGACAAAGCGTAAAGCTAACA 101480 28 100.0 32 ............................ GCCGGAAGCTGCATCTGCTTTCATCAAATGCG 101420 28 100.0 32 ............................ TGCCTGTGCAATCAAGTCAACCAGTGCTGCAC 101360 28 100.0 32 ............................ TATTCCGGGCAGACTGCTTTCTCCCCCTGGGA 101300 28 100.0 32 ............................ TCAACAAGGACTTTAGTGATGCTGTTTTCTTG 101240 28 100.0 32 ............................ CAAACACGGCGCGAGGGCTTGAACAGCAGGCT 101180 28 100.0 32 ............................ TTTGTCTTGCCATCGCTCTTTGATGACTCGTA 101120 28 100.0 32 ............................ ATACGCGCTTGATCAATCGGTGACGGCATTTA 101060 28 100.0 32 ............................ AGCAAGCCTCCGCGCCCGAGTGAATCAATCTC 101000 28 100.0 32 ............................ TGATGAGCAGATGCAAGATGACCAACAGCCAG 100940 28 100.0 32 ............................ ACCCAAAGAGGGCGATATCACTATCGAGTGGC 100880 28 100.0 32 ............................ TCGCCACCTCAATGGCACCGGCGGTAAAAGCC 100820 28 100.0 32 ............................ ATATCAAGCACTTTGGTTGAGCCTACTTTGCG 100760 28 100.0 32 ............................ GTAGCGTGGGCGAACGAAATACCGCCAGAAAT 100700 28 100.0 33 ............................ CAGGCGAACGGCGACGGGACGGCACGACTAATT 100639 28 100.0 32 ............................ TTACCGACCGTATCGGGCCAGGCGTCGACCTC 100579 28 100.0 32 ............................ GTTATCCGTCTCCCACTGAAAACCGCCGATAA 100519 28 100.0 32 ............................ ACTTGCACAACTTTGCTTGCCATAATCTGCTC 100459 28 100.0 32 ............................ AACACGGGCCTAAACGGCTTAGACGTCCTCGA 100399 28 100.0 32 ............................ GCGCAAAGTGGTCTGTATGTACGCGGGGTCTT 100339 28 100.0 32 ............................ GTACCCCTTCCGTCTGCGTTTTCTGCCTTCAA 100279 28 100.0 32 ............................ GCCAGCACAGGCCCGGCCACGCCCTCCTGCAA 100219 28 100.0 32 ............................ ATGGCACATTGACGCCGTTTACCGCGCCATGC 100159 28 100.0 32 ............................ ATTCGCCGGGTCGCAGACCGGGTACTCAATTC 100099 28 100.0 32 ............................ ACCACGCGAAAGCCAAAGAAGTCGACATCTTC 100039 28 100.0 32 ............................ TGTATAACCAAAGCTCATGTTGCTCACTCTTG 99979 28 100.0 32 ............................ GTACTGCAGCGCAAAATCGTAGGATGTGCCAG 99919 28 100.0 32 ............................ GATACCCCGGCTTTGTCCATTTCATCCTTGAG 99859 28 100.0 32 ............................ TTTTTCAGTTGTTCGTGACGTAACTATACATG 99799 28 100.0 32 ............................ CCTTATTCGTTCCTGCTAGGCCAGCCCCGCAG 99739 28 100.0 32 ............................ AACGGGGAGACACAACCGTATGACCATCCTGT 99679 28 100.0 32 ............................ AATCACGCCGGTAACGACTTGCCAAGCGGTTA 99619 28 100.0 32 ............................ ACTGATTGGGATCCATGGTTTCCGGCAATGAA 99559 28 100.0 32 ............................ AAGTAGTCGGGGCAGCCATACACCTGCTGAAC 99499 28 100.0 32 ............................ GTCCGGCCGGTTCATCCAATACCACCGGCCGC 99439 28 100.0 32 ............................ TGCCTGTCCCGTTGCCAATGGCGGATCGACGT 99379 28 100.0 32 ............................ GAACCATAGGCAAGATTGAGCGTGGCTATGAT 99319 28 100.0 32 ............................ ATTCTGTGAAAATTTAAACCCGGTCATAATTA 99259 28 100.0 32 ............................ GACAACCCGCTGCAGTGGTGGGGCAACGCCGA 99199 28 100.0 32 ............................ ATTCGCAACGTCCTGCAGGAACTCCTGGTCGC 99139 28 100.0 32 ............................ ACTAACGAGGTGGCGACTCTCGACTTAATATT 99079 28 100.0 32 ............................ AAATGGAGCGCACACGGTATTGGCTATTTGGC 99019 28 100.0 32 ............................ TGTGACCGATGAAATTATGGGCCTTGATAGTG 98959 28 100.0 32 ............................ CCGAAGAGGCAATAAAAGAAGAAGCTGCTTTG 98899 28 100.0 32 ............................ AACAAGTGAAAGACGCTGAGAAGCAAGGCATC 98839 28 100.0 32 ............................ TGGAAGTGTACCGCGATGCCGGCGACCAGAAC 98779 28 100.0 32 ............................ TTCCACCGCCTACAACTCTGTTGCCAATAATG 98719 28 100.0 32 ............................ AGCGCCGCCGCGAGGCCGTGCCAGGGTGTACC 98659 28 100.0 32 ............................ ACTTACCGAGTCGGAACCGCTCCAGGGTGATC 98599 28 100.0 32 ............................ AGGCCGAGAATGTGCTGTTAACAGAGCCTCGA 98539 28 100.0 32 ............................ TTATAGTGCAGCAATGACAGCGTAAACCCTGT 98479 28 100.0 32 ............................ CAGCTCGGCCAAGCTTTGGCGTGTTTCAACCC 98419 28 100.0 32 ............................ TGCATAGGGCTCTGATAAGGGATGATTTCAAC 98359 28 100.0 32 ............................ TGCCAAGTGAATATTACCGACACCGGTATCGC 98299 28 100.0 32 ............................ ATCAGGCCCGGTTAAAGTGGCAAAGTCGATCT 98239 28 100.0 32 ............................ GTTTGAGGTTTAGGCTGCCGGTGCCGCACCTA 98179 28 100.0 32 ............................ ATGAAGTGAATTCCGGATTGAACGCCACGAAT 98119 28 100.0 32 ............................ AACAGACTTCAATCATATCCTTAAGGTCACGA 98059 28 100.0 32 ............................ TGCACCTGCAACTGCTGGAGCTGGATGCCGAT 97999 28 100.0 32 ............................ AGCAGCGCCGGAAGAGGCCAAAACTCCCACCA 97939 28 100.0 32 ............................ AGTGCCCGTTCACACATATAAATGCGCACAAT 97879 28 100.0 32 ............................ ATTAGATGCACCCCTCTACGAACTGCTGAAAC 97819 28 100.0 32 ............................ TGGTTAATGTCAACGTAGTCTTCTATATTATC 97759 28 100.0 32 ............................ TAAGTCCCTCAGCCTTTTCTCTAGGTGTTTCT 97699 28 96.4 32 ..........A................. ATCAGCGGTTCCAACTCATAGCGTCCGACAAT 97639 28 92.9 32 ..........A.T............... AAAAACAAATCCCCCCACGAGGTTATAGGCTC 97579 28 96.4 32 ..........A................. CCAAAGAAATTGAGCCAGTGATGCAGTCTGTA 97519 28 96.4 32 ..........A................. TGATTAAACCAGCGTTCTGGCGCACTGTCAGG 97459 28 100.0 32 ............................ TTGTTGCCTTCGTGCATTGCTTCAATGCCGCT 97399 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 123 28 99.9 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACAGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGTATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTGTTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACATTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGCTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGAGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //