Array 1 1241-22 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZE01000045.1 Thermaurantimonas aggregans strain LA sequence45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1240 37 100.0 36 ..................................... GTTTAGATAAATACCATAACCATCTGGCGTCACTCC 1167 37 100.0 35 ..................................... ACAAATAATTAAATCCCAGCACTTCGGCTGCCCAG 1095 37 100.0 39 ..................................... AAAAAGTGCTTTGCCACTTACAGGTACAATAGCGTCAAA 1019 37 100.0 38 ..................................... TTTACTGCGTCATTGATCTCAGTGTAATTTTTCATGAC 944 37 100.0 36 ..................................... CCATTTGAAAGACATTTAAATGCATTGTCAAAATCA 871 37 100.0 36 ..................................... ATTTAAATGCATTGTCAAAATCTGTTTGTAAAACTC 798 37 100.0 36 ..................................... CATCAATCACCTGCGCTATCAGTGAGGCATCAGCCG 725 37 100.0 38 ..................................... TTTGGTGAGGGGTGCAGTATGAAGACACCCCCAAAACG 650 37 100.0 38 ..................................... CAGTTATAGGGGAGAGTGATTGTGAGATAATATATAAA 575 37 97.3 36 ......A.............................. ACGTGTCTAATGAGGGTAAATTTTTTTTCTTGTTTC 502 37 100.0 37 ..................................... TCCGGCAATTCTTCGTGTGTACAGGGTATTATTACCC 428 37 100.0 37 ..................................... TATATTTCTACTGGTAACTCCCCCCAGTTATAGGGGA 354 37 100.0 36 ..................................... TGATTTAATAGATTCCGGCAGTTCATCGTGGGTCGC 281 37 100.0 38 ..................................... TTTTACATGCCTGATGAGGTTAAATTTTTTCTCTTGTT 206 37 100.0 38 ..................................... TAAAGGAAAAACGCTACCACAGCAAAAATGAATGTCAG 131 37 97.3 36 ...G................................. TGATTTAATAGATTCCGGCAGTTCATCGTGGGTCGC 58 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 17 37 99.7 37 ATCACTCTGTAACTTCCACTAAAACAAGGATTAAGAC # Left flank : CTACGAATACTTTGCCCACCAAACTCAACACGGCAAAGCACGCATCATAAATCTAACACCCATCAAAAACATAGAAGCAGAATACTTCAAAGCACTACTACACATTGACGAACAACAAACCCACATCGTCTTAACACAGCAGATACCCCTCCCTCAGCAAGAGCCGCCCATCAAAAACGTAGAAGGCCCAGTACAAATTTCACCAGATAAAAAATTTGCACTAATCAAACAAAAGTATTACGTACCTCCTCAACTTATTGAAAAACATCACCTTAAAAATGGTCAAAACCTTAAAGCAACCGTTTTACGCGCGTGGGATAACAAAAAAGAAAAATTCGGTTGGAAATGTATAAAAATAATCCAATAAACTTGCAAATGTTCATCACCAATACGAAAATTGCACTATACCAAATGTATAATTTATTCATGACAACTTTTGATAGAAATTGCTCTGTAAAGTTCTTTAACATACTGAAAATCAGCAAAATGCAAAAATACCT # Right flank : CTTTTACATGCCTGATGAGGTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCACTCTGTAACTTCCACTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 51544-51195 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZE01000017.1 Thermaurantimonas aggregans strain LA sequence17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================= ================== 51543 47 100.0 28 ............................................... AAAAGTAATTTTAATATCCGTAATAGGT 51468 47 100.0 29 ............................................... ATAGTTAAATAAAATGGTACCGGCGGGTG 51392 47 100.0 29 ............................................... ATATGAAAAACGAAAAGGTTATGTAAGAA 51316 47 97.9 28 C.............................................. GCAAAAAAAAAATACTTACTTGATATAG 51241 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================= ================== 5 47 99.6 29 TAATGTCAAAGACCCAAAAATATTAAAAATTGAAAGCAAATCACAAC # Left flank : GAGTCGCGCAAGATGCTCTATCCTGAAATGTTGTAATCAGATGAATACCCGACTAAATGCCTATCGAGTCATGTGGCTGTTTGTATATTTTGATTTGCCCACCAATACCAAAGCCGATCGAAAGGCATATTCCCTCTTCCGCAAAGAACTGCTCAAGGATGGCTTTATGATGATTCAATACTCCATCTATGCCAGGCATTGTGCCAGTCGCGAAAACCTGGAGGTACACAAGAAGCGTGTTAAAAACATCTTGCCCGAAAAAGGAAACATTATTCTTTTTGAAATTACAGATAAGCAATTTGGAATGATGGAATTTTTACTCGGCCAGAAAAAAGCAGAGAAAAATCCAGGGCAAAGGGTGGTACAACTCCAATTAGAACTGTTTTAATCTAGAAGGGTATTTTTTTAGTTAAATTCAAAATCCGAAGCCAAAATGGCGACGGATTTTGAATCCTATTTTTAGCGCATGTCTTTGATAATCAGTTTTATAAATAGAGTTC # Right flank : CGCTTCGGCTATCCATTTTTCGGGCGGTAGCCCGCTGTGTTTAATGGGCATATTTTTTGGGGTTTTGAACTTTTAAAAAATTTGTTCGTATATTTGCAACGTGGAGTCGAGCCTAAGGCTTGGCACCATGTTGAAGCTGGGTTTTTACAAGCCCAGCTTTTTTCTTGTATAAACTCTCCGCAATTGCCCGTTAATTATTTCAACGGATTGCAGGTGTTTGTAATCTTTTTCCATTTTTAAGCGGCAGGCAGATTTTAGTTGCTTCCAACTTTGAACTTGGCGCAACTTAATAATAGCGTGTTCGCATTGTTTAGCTGCGCTGCCAATGTTGTTCTTAAAAGTGTTTTTACCTTTTCCTGTGGGCCATTTTAAATCAGCATAGTCAGTAAAGTTTAGTCGGTAGTCAGGGTGCTTGCCATGATGATTGCTGTTAGGGAAAACCTTTTTGTAAAAAATTTCCACTTCTTCTGTATTTAGTTCAGGTAATAACTCCACGGTAT # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAATGTCAAAGACCCAAAAATATTAAAAATTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.47%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 1 379-855 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZE01000052.1 Thermaurantimonas aggregans strain LA sequence52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 379 37 100.0 38 ..................................... GCGCAACTCCCCAAAAAAGCTGGTCGTTAGTTGCGAAT 454 37 100.0 35 ..................................... GCCCAAAGAAATATACAACGGAGATTTCTTTGGGA 526 37 100.0 37 ..................................... TGTTTGGGAATTTGCACCAAGTAACAGTTACCGTCTG 600 37 100.0 38 ..................................... CTGACATTCATTTTTGCTGTGGTAGCGTTTTTCCTTTA 675 37 100.0 38 ..................................... AACAAGAGAAAAAATTTAACCTCATCAGGCATGTAAAA 750 37 100.0 36 ..................................... GCGACCCACGATGAACTGCCGGAATCTATTAAATCA 823 33 89.2 0 .................................---- | ========== ====== ====== ====== ===================================== ====================================== ================== 7 37 98.5 37 GTCTTAATCCTTGTTTTAGTGGAAGTTACAGAGTGAT # Left flank : CTGCTCACAATTGTTCGCCGGCATTCATGGAAAGTTACAGAGTGATATGTCTAACAAGGAAAAAAAAGAATTAGACTATAAAAGGTCTTAATCCTTGTTTTAGTGGTGCAGACGATCCCTGCGGGATGTCTGCATCCATTCATACTGCTGCTCACAATTGTTCGCCGGCATTCATGGAAAGTTACAGAGTGATAAAACCTGGGACCCAGTATTTCACTGGGTCTACAAAATGTCTTAATCCTTGTTTTAGTGGTGCAGACGATCCCTGTGGGATGTCTGCATCCATTCATGCTACTGCTCACAATTGTTCGCCGGCATTCATGGAAAGTTACAGAGTGATAAAACCTGGGACCCAGTATTTCACTGGGTCTACAAAATG # Right flank : | # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAGTGGAAGTTACAGAGTGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //