Array 1 33-1891 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWTG010000025.1 Desulfuromonas acetoxidans strain DSM 1676 assembly_contig_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33 29 100.0 32 ............................. TTCTTGCTGTTTAGGTAAACCTCTATGCCTTT 94 29 100.0 32 ............................. TCTGACATATCAATACTCCTTATTCTGGTAAA 155 29 100.0 32 ............................. TGGGACTACTACCAGGAATTCACCAAATTTCA 216 29 100.0 32 ............................. CTTGAACAAGAAAAAGCAGAGCTTGCACGTCT 277 29 100.0 32 ............................. GTTTTCCCAGACCTAAATAGCATCCGACGCGA 338 29 100.0 32 ............................. CTCGTTGACCTTTTTTATCACGGCAGACAGGT 399 29 100.0 32 ............................. TTCACAACAATGCCAGCCCCAGACACGCGAGC 460 29 100.0 32 ............................. GGGGCCGACCATGACCCTGAAGCTATGTCCGT 521 29 100.0 32 ............................. CTTGGTGCCGATGACGGCATCAACGCTGTCGA 582 29 100.0 32 ............................. ATTGAGGATGCCACGCAGCGCGGCTTTAATGC 643 29 100.0 32 ............................. TCGTCACGCTCCTTGACAACCTCATCGAATAA 704 29 100.0 32 ............................. ACGTGCGGCAATTTTCATACCGCTTGTCATGG 765 29 100.0 32 ............................. CTCATCAACCTTTTTATTGACAAAATCACGTC 826 29 100.0 32 ............................. GCGGTCATTTTGCTGTCGTCTCTCCGGTGGTC 887 29 100.0 32 ............................. CACCTGACTGGCTAAAATCATGGACAGACTGT 948 29 100.0 32 ............................. GTGCGATATTGCTTGCTGATTCATTGAGAGCC 1009 29 100.0 32 ............................. TCGAGGCCACCATCAACGGCAACGTGTTTAGG 1070 29 100.0 32 ............................. AGGTTTTTTTGGCGTTGCTCGAAGAATCAAAC 1131 29 100.0 32 ............................. GATTCAAAATGACCCTTTTCGGAGAAATAATC 1192 29 100.0 32 ............................. AGCGCTGAGGGTGCTTCGGTGATGGAGCAGAT 1253 29 100.0 32 ............................. AGAGCGGCCAGTGACCACGCCCAGAGGTTGCC 1314 29 100.0 32 ............................. CCGCTGGAACTCATTTTGTCGCCAAGACGATC 1375 29 96.6 32 ............A................ ATGATTGCCGGGTCGCGTCGGATGCTATTCAG 1436 29 100.0 32 ............................. GCTTAACATTCCTTTGTTACTCCTGAAAATAC 1497 29 100.0 32 ............................. GAACAAGCGCCACAGACAACTGGTATATGAAA 1558 29 100.0 32 ............................. GTAATATCCATTTTTTTACGGGTGTCGTTGCC 1619 29 100.0 32 ............................. TCCGATCACCGCCCAGATAACGGCGGAGATCG 1680 29 100.0 32 ............................. CCGCTCAAAGTGCCACGGCTTGTAATACTTCC 1741 29 100.0 32 ............................. GCAGTGGCATCTATCGGCGTATCACGCCGGAC 1802 29 100.0 32 ............................. AACTGGCTGCCCACAGGCGCACTTGTTTTTTT 1863 29 93.1 0 ...........................AA | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.7 32 ATGTTCCCCGCAGATGCGGGGATGAACCG # Left flank : AATAAAACGTGCGTCCTCTTTAGGGATTCCGCA # Right flank : ACAAGTAGTGACATCGCTCGTCATTCCCTTCGTCCATGCTAAACTTGTAATAAACCATCTTACATTCCAAACCATATAAAGGAGTTGTCTATGACCCAAGAAAAGCATGATCGCATGGAAGATCTTTCGAAATGCATTCCGGTTCCGGATGACACCCAGGCGTTTATGTGTGCCCGCTGTGGCGCGGTATCATTGGATGTGGATCGTTTGTGTCAACCTTTGGGCAAAGGGTGCCGGCGTGATTGGTGTGGCACGCCGAGTTTGAAACCGCCGGAAAGCTGTCAGAATTTCCCTAATAATCTTCGTTATATCTGTGGTAAGTGCCGCAAGGTGGCTGTGAATCCGGAATTGTTGTGTGATCCGCAGCCCTATCCCGAACCGGAACAGAAGGAGGGAGCATCGTAAGGCACCTTCCGTTTTAGAAACGATGCGCCGTTGAGTTTCTTGTCAACGGCGTTTTTCTTTGGGGTGAGTCAGCCGTAGATAGGCATTTGGTAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCAGATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCAGATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4270-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWTG010000028.1 Desulfuromonas acetoxidans strain DSM 1676 assembly_contig_28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4269 29 100.0 32 ............................. TTGATGACTTTGTTTGTCCAAGATGAAAAAAC 4208 29 100.0 32 ............................. AGATAGTGAAATTGCTGTCGTCTGAAATAGCT 4147 29 100.0 32 ............................. CATCCTACGAGTTACAACGCAGCTTAGGCATA 4086 29 100.0 32 ............................. ACACATTTACCTTCACCGACGAAGAGCGCGCC 4025 29 100.0 32 ............................. AACTGTTTTACGGATCACTGGTCGAAAGCCTC 3964 29 96.6 32 ...................A......... TGGCTGGAGGGCATCGGCTTTGCGCCTGACCC 3903 29 100.0 32 ............................. GCATTGCCAATGCCGCAGCAGACAGCACCGGG 3842 29 100.0 32 ............................. TTTTTTGGATTCTGTACGGAGGTAACGACCCC 3781 29 96.6 32 ............................A TCAGCACCGTGGTGGTGGCCGATGCGGAAGCC 3720 29 100.0 32 ............................. GCGAAGCCGGGTACCAGGATGCGCTCGACGAC 3659 29 100.0 32 ............................. CCCGTAATCGTGATGGACAAGGCAAAGACGGT 3598 29 96.6 32 ............................T GGGGTAGCGGTGGCAAGAAAGCGGTATTTTAC 3537 29 100.0 32 ............................. CCCAATATCAATGGCGGCTTGGATTTCTGACA 3476 29 100.0 32 ............................. TTGACGTTGAGATAACTACTGACCGCGCCTTG 3415 29 100.0 32 ............................. ATGCATTAAAGGCTGTCGTAAACGAGTGGGCA 3354 29 100.0 32 ............................. TCTCAACAGCCTTAAGCGTGGCTGAAAATTCA 3293 29 100.0 32 ............................. GAAGCTGTGCAGGTGGCGGCTATGGGGCTTAA 3232 29 100.0 32 ............................. CGATAGTCAACTGAAGTTTGCACAGGACTATA 3171 29 100.0 32 ............................. TTCTTCCGTAACAATCAAAATAGCTCTGACAG 3110 29 100.0 32 ............................. ATTGAGGCGCAACAGCTTCGGTTTGCACAGAC 3049 29 100.0 32 ............................. AAATAGCGCAGAACGTCGCCGCCATGCGAGCC 2988 29 100.0 32 ............................. CTAACCCCCTGCATCCTGACCAGCGGGGCAAA 2927 29 100.0 32 ............................. TACCTGTATCAACTTTGGGGATCTCCAGAACT 2866 29 100.0 32 ............................. TCTGGCATTGCGCTAAACGATACGCTACAGTT 2805 29 100.0 32 ............................. CGCCCGATGAAGGAAAAGAGGAGACCGAAGAA 2744 29 100.0 32 ............................. GTCTATCTCTTGCCCGCTATCCTTCCGCGTGG 2683 29 100.0 32 ............................. TTGGCAACGCTTGGCTGGGCGGGGGCGTTGGG 2622 29 100.0 32 ............................. ACCTGCTGTAATTAAATATAGGAATTTTTGCG 2561 29 100.0 32 ............................. CGGTTAGCCATTTTCTTCATCCTCCATGCTGG 2500 29 100.0 32 ............................. CACAAAAGAGGCGCTTAAAATGGAAATTCAAG 2439 29 100.0 32 ............................. CTCTCTGCTAGTTTCAACGCCTGTCCGCTGCC 2378 29 100.0 32 ............................. AAGACAAACAGCACCAAAATGAATCTGGAATA 2317 29 100.0 32 ............................. ATAGGGAGGCGCGCCAAGTTGGAATCGCAAAC 2256 29 100.0 32 ............................. AAAAAACGTGCAGAGATGGATGGACAACCACA 2195 29 100.0 32 ............................. TCCCTGCATTTCTGGCAGTATTCGCACTCGCG 2134 29 100.0 32 ............................. ATGACTGAGCAACTTCTTCCAACCGTCAACAC 2073 29 100.0 32 ............................. AAGTATTCTGGACCTCAACACCGGAGCCAGTA 2012 29 100.0 32 ............................. TGATTCTCCCGGCCAATCTCTGGCGGTGTTTC 1951 29 100.0 32 ............................. TTGCGGTTTGGCATCAAGAGCGGCACCGACTG 1890 29 100.0 32 ............................. CACTCTTCGAAACCCCGGCGAAGATCGTCGCG 1829 29 100.0 32 ............................. CCCCGGAGCGATCCGGGGCCGTTGTGTTAATA 1768 29 100.0 32 ............................. GGATATAGCGGAAATCCATCAGTACATCAGGG 1707 29 100.0 32 ............................. GCACGGATAATGCTGTACTCCTGATCTTCACG 1646 29 100.0 32 ............................. TATGGAGTGGAACCAGGGTCAATTTCTTATGA 1585 29 100.0 32 ............................. GCCTGCAGCCAGCAGGATGTCATCAAACACGT 1524 29 100.0 32 ............................. TTTTTCCGGTAGCTCAATTACCAGTTCATCAA 1463 29 100.0 32 ............................. TTGATGTTGATTGACCCTCCACCACCACCCGA 1402 29 100.0 32 ............................. GATTAACTCGGGCGCAAGAGCTTGAGGCAGGG 1341 29 100.0 32 ............................. GCGTCATGGAGAACTGTTAGATTCGAAGGTAT 1280 29 100.0 32 ............................. TAAAATAGGGCCAGCACTTGCGCTTGCAGGTG 1219 29 100.0 32 ............................. TAGGTATAGATGTAGTTAGTAGCGCAACGCCA 1158 29 100.0 32 ............................. TAACTCCGTCAACAGTAACCTCAACCTCGACA 1097 29 100.0 32 ............................. GTACGGCAAGCAAGGCGGGCGCCGCAACAAAG 1036 29 100.0 32 ............................. GTCTGTCATTACTGGCTTTCTTGCCTCCTTTT 975 29 100.0 32 ............................. CCATCCCGTGATCTCTTGCTCTAATATAGTCA 914 29 100.0 32 ............................. GATCATTTTAAGGGCGCGCCTGGTGCTGTATC 853 29 100.0 32 ............................. CCGCCAGTTCCAGAGTGGTCAAAGGACGGTGC 792 29 100.0 32 ............................. TATTGGTTAGGTTTGGACCTGCCGCTTTGCCG 731 29 100.0 32 ............................. AGCGCGAAAAGAGTTCACAGACGAACAGGTTA 670 29 100.0 32 ............................. GTAGGTGTTGCAATGATCCACCCTGAAAACGT 609 29 100.0 32 ............................. TGGTACGATGCCTCAGCATCACAGCGGTGGTA 548 29 100.0 32 ............................. CTTTTCACCCCACCAGATACCACCCAAATTAA 487 29 100.0 32 ............................. ATGATCCTGATTCCGGTGCTGTTCAGGTTGCT 426 29 100.0 32 ............................. TGGATGGCGTTCACGTTGCGTTATCCTGAGCA 365 29 100.0 32 ............................. TTACTCAGGTCAACGGCTGTCATCAAATAGTT 304 29 100.0 32 ............................. CGGAGATGCTTTGTGTGTTCCCACTTGCGAGC 243 29 100.0 32 ............................. ACACCATCCTCTGATCCGATTGGGCTGACTGA 182 29 100.0 32 ............................. AAATTTAGTTCTTCTGCTCTGTCGATAACGTC 121 29 100.0 32 ............................. TGTTCTTCACAGCAGTAGCCTTTATCTCCACA 60 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 70 29 99.9 32 ATGTTCCCCGCAGATGCGGGGATGAACCG # Left flank : CAAATTCTCGCCGCCGGAGAAGTAACCGTGCCGGGGAAACACATCGAAGCTGTTGATATGGCCATCCCCAACAAGGAAGGAATCGGTGATGCTGGTCATCGTGGTTGAAAACGCCCCGGACCGTCTGCGTGGACGATTGGCTTTATGGCTGCTGGAAGTGCGTGCCGGTGTCTATGTCGGCAAGCCGCCTCGGCGAGTACGGGATATGATTGTCGATAACGTCCATCAGGGCATCGAATCCGGGAATGCGGTTATAGCCTGGAGCACGAATACTGAAGCCGGTTTTGATTTTATCACTCTCGGTGAAAACCGCCGTATTCCAAAGGAGATGGATGGCATCAAGCTGGTGTCCTTTCTTCCGGAGGTTGAATGCCTCCCTACCGATACAAGCAAAAATGGTGGATGATTCGTGTTTCTAAAGAGATGTAGATAGCCCTTCTTTTTCTGGTAGAAAAAACAGTTCATTGAAAACTGAATAAATACGAATAGATATAAATAGT # Right flank : GGAGCCTAAACAGATGAGCGCAACAGCACACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCAGATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCAGATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //