Array 1 5583-3792 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSWY01000006.1 Corynebacterium diphtheriae bv. mitis strain 5200 Contig_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5582 28 75.0 25 TCA..CA............A.....C.. GGCGGTCCAGTTCTCAAAGTCCCTG T [5557] Deletion [5530] 5528 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 5467 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 5406 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 5345 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 5284 28 96.4 33 ..........C................. CTGGGGTCCCAGAGGGCGTCATCGCTCGTGTTG 5223 28 100.0 33 ............................ TTTTGAGCAACCCGCGCCGCGGCGCGGGCAAGG 5162 28 96.4 33 ..........C................. TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 5101 28 100.0 33 ............................ TAGCCATCATTCTCTCCTAGGGCCTCTGAAAGG 5040 28 100.0 33 ............................ TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 4979 28 100.0 33 ............................ ACGGGACCTATGCGGGCATTGATTACACCATCC 4918 28 100.0 33 ............................ ATTTGCGAAACCACCTCTATCTTCGGGACAGCG 4857 28 100.0 33 ............................ TGTTTTATTTTCCGCTCGTGCTTCAGCAACTAG 4796 28 100.0 34 ............................ CATAGGACTTCCCCTTCGAGTACATCCCCGCTGG 4734 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 4673 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 4612 28 100.0 33 ............................ GGGTTTTCATTGCTTTTATGCTGGGTGTGGCTA 4551 28 100.0 33 ............................ TCTGTAGGATTCTGCCCCTTTTCGCAGAAACAG 4490 28 96.4 33 .....................A...... GCGCCGCTGTCGTCAAGGTCGGCGATGAGGGTG 4429 28 100.0 33 ............................ GGCCTGTGATCACGTAGAGCATTCCCCACCTCC 4368 28 100.0 33 ............................ CCGTTGAGCGAGTGCACGATGTCGGCCCATAGC 4307 28 100.0 33 ............................ AAACGGGACGCTGTGACGGCGGGGCAGCATTCT 4246 28 100.0 33 ............................ AAATACACAGTGGAACCGAATCCAAGATCGTGG 4185 28 100.0 33 ............................ ATCATGTGAAGGTGATGGTCGAATGAGTGCCGG 4124 28 100.0 33 ............................ AGCTCGGCAGCAAGCAGCGGTCATGGGTGCGAC 4063 28 100.0 33 ............................ TGTCATCGCGTCCTGCCTAGTCCGCTAACTTCG 4002 28 100.0 33 ............................ TTCATGGGTGTATCCCCTCCTTCCCCCATGAGG 3941 28 100.0 33 ............................ GCAGCGAGGCGAGGGCGATACCAGCACTTATTG 3880 28 100.0 33 ............................ CCAGCCCTCATCCCGTGCGATAAGGGCTTTTAG 3819 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 30 28 98.0 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //