Array 1 199485-202563 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJGK01000012.1 Citrobacter braakii strain MY49 MY49_BDMS190049499-1a_1.clean_(paired)_contig_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 199485 29 100.0 33 ............................. AAGGTAAACGGAACCCCCGTCAAACATTATCGC 199547 29 100.0 32 ............................. AATCGCAGTTGACGTCACAGCAAAAACAGGAA 199608 29 100.0 32 ............................. CCTACCCAAGCAACCACAGCTAAACCAAAAAC 199669 29 100.0 32 ............................. AGCCACACGCAGGAAGAGATCCGCGAGGCGAT 199730 29 100.0 32 ............................. CAGATGCGGACTATTTCTGGGCCACGGCATAC 199791 29 100.0 32 ............................. AATCAAATTCTTCAGTTAATTTCTTTTTGTTT 199852 29 100.0 32 ............................. ATACTGTACTCACCGCGCAAAAATTGACCGCC 199913 29 100.0 32 ............................. GCTATGCCATCCATCATGGGCGCAGCAATGAA 199974 29 100.0 32 ............................. ATGCAGACTGAGGCGCTCAAATTGCCAATCGT 200035 29 100.0 32 ............................. ATTCTCTTTTATCAGAGAGGTAGAGCGTATTG 200096 29 100.0 32 ............................. CTTTTCATCGATTTGTTACCTGACTTGCGCCA 200157 29 100.0 32 ............................. CGGCGCAATTTTCTGGTGATGCTTCTTAATGA 200218 29 100.0 32 ............................. TGGCGAGCTAACCCGCCATCAGTCCGCATCAC 200279 29 100.0 32 ............................. GGGCGATAACAGAATATGAAAACCATCAAAAT 200340 29 100.0 32 ............................. AGTGCGAGACAAGCCGCAGGGAGTTTGGTTTG 200401 29 100.0 32 ............................. AATGAGTGCCGGGTTACAGTGATACGTGATGA 200462 29 100.0 32 ............................. TTATTCCTCTTTGTCCAATCCATCACCGCCAG 200523 29 100.0 32 ............................. CCGGGTCAGGGTTATCCGGCTGTCGTCGTTGG 200584 29 100.0 32 ............................. ATAGGTTCTCTCGCCTGATGTACTCAAATGAA 200645 29 100.0 32 ............................. ATTGACGATGATGCCGCTGTGGCAATGGTTGA 200706 29 100.0 32 ............................. CCAGCGGGGTACGCCTGTTGGCCCTCATTTAA 200767 29 100.0 32 ............................. ATCTCACCGGTTTTGCGTGATTTGATCGTCAT 200828 29 100.0 32 ............................. TTTATGACCTCCATGCTAAAGCGAAACGAAGT 200889 29 96.6 32 ............................T AATGCTGAAATAACTTTGCTCATTTGAATTCC 200950 29 100.0 32 ............................. GTAAATCCCTCGGGAGTATTGCCAGATTTTTA 201011 29 100.0 32 ............................. ATTTCGACGATGACGAACCTATTCACTATTAT 201072 29 100.0 32 ............................. AAAACGCTCCAAATAAATAAATAATCATCGAA 201133 29 100.0 32 ............................. AAATCACTCAAATTTTCTTTGCTAACATCAGC 201194 29 100.0 32 ............................. AGTACAGTATTAAAGATACTGTACCCACCGCG 201255 29 100.0 32 ............................. ATGAATAAATTCTAAAATCATCAATGTTGTAA 201316 29 100.0 32 ............................. AACTGGCGGTACAGCTCGCTAACGCCGAGAGC 201377 29 100.0 32 ............................. GTTTCTACCCGCCTGCCTTACTCAATGATTTA 201438 29 100.0 32 ............................. GAAAGACGTCAGGCAAATATTAATGCGGTCGA 201499 29 100.0 32 ............................. CGACGAATCGGAATTTCACCAGGTGGAGAAAT 201560 29 100.0 32 ............................. CATGGTTCCTCTAGCAGTGTGGTAATCCTTGA 201621 29 100.0 32 ............................. CTTCTTGCTTCGGCATTGGATCGTGGGTTGGT 201682 29 100.0 32 ............................. GTGCCCCCGCGCGGTCCGTTTTCCTTTACGAA 201743 29 100.0 32 ............................. CTGTACGCCGCCCCGCCAGCGCCGGTAATGCC 201804 29 100.0 32 ............................. GACATTCTGGTCTACGTTATCCAGTTCGCCAG 201865 29 100.0 32 ............................. AAATTTTAAATATGCAGATCTGCACATTTAAA 201926 29 96.6 32 C............................ CAACAATGTTTGCCCGTCTTTTAATGATACAG 201987 29 100.0 32 ............................. TGGTTCGCGTTCTCTTCGTGTGCGTCCTGCGT 202048 29 100.0 32 ............................. ATATCCTGACGACATACCATAATCATGCTCAA 202109 29 100.0 32 ............................. CGTTCGCTCAGTCCTGTATTTTTTGTTTTGTA 202170 29 100.0 32 ............................. GGGCTTGGGTCCCTGGCTTACGGGGAAAAAGC 202231 29 96.6 32 .......T..................... GCGGCGGAGAGTCATCACCTGTCAGCGCAGAG 202292 29 100.0 32 ............................. GCCAGCGGCGAACTGGACAACGACAAAATCGA 202353 29 100.0 32 ............................. TTATTCATTCGTTTATGAGGCACGTAGCGAGA 202414 29 96.6 31 ...C......................... CACCCGGGCGGCGTATTCTCGCCAGCAACGA 202474 29 100.0 32 ............................. ATATACCTCAGCTCTATATAGTGTTCTGCCCT 202535 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAAGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGGAATTTTTCTACGGCTATAATCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAACGGGAGCATAATGCGTATCACGTCGCGGCTACGGTGCTCTATTCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //