Array 1 321-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENSG010000210.1 Streptomyces sp. MBT51 scaffold210_size10224_cov86.0008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 320 29 100.0 32 ............................. CGGACGGGCTTCTTGGCGATGCCCTCGACCTT 259 29 96.6 32 .................A........... CTCTACGACCCCGTCACCTGGATCACCGGAGT 198 29 100.0 32 ............................. ACCGTCTCGATCTGCCGCAACGGCTATGCGGA 137 29 96.6 32 ............................T CCCGGTGAGAACGAGGACACCGCCGATACCAC 76 28 75.9 0 .C.........A.G-.......C..C..G | A [53] ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.8 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GGGCGTTGGAGAACGCGGAGCTGTCCCACTACGTACGCGGCGTCCACCCGGACGAGGCCGCTTGGAAGCAGGCCCTGCGGTCCGCCCCCGCCCGGGTCCAGTGGGACCCCGAGCGGGACCTGGACCTGAACCCGCTGCCGTACCGCTCCCTCCAGCTCGGCCTGTCCGGCGAGGCGGCGCGGAGGTACGCGGACGAGTGGACCGTGTCGATCCGCGACGTGACGCCGCTGGCGCGCGACGTGCACGAACTGGTCAGGGCGGGGGAGCGGGACCGGGCCGCGAGCCTCCTGCCGACGGAGGCGCCACTGCACCTGCCCGCGCCTCGACCGCTACCGGTTCCGTCTGACGGCTGAGTGCGCCGCACAACCGGTGTCGAGGTGCGAGGAGTTGGCTAGGCTGAGCCTCTCGGCGTAGGGGAGGGCGTTTTGTGTGACATGCCGGAGTCGGCGAAAGTGCTCCAGAATGACCGACCGCGCCGATAAGCCCCCTGGTCACGCAGT # Right flank : GGTGGGACCGGAGCAGGACAGCCCCACCGGGCTCGTCCCCGCCGTGCG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 21-3031 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENSG010000262.1 Streptomyces sp. MBT51 scaffold262_size5679_cov96.7818, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================================================================== ================== 21 33 87.9 28 .............................AGAT GCGACTTGTCTCCGAGGAGGTCGGCGAC 82 33 93.9 28 .............................T..T CACGGGCATCCCGGCCGGGCCCGTCCAC 143 33 93.9 28 ..............................T.C GCCAGGTCCTGCTCGCCGCGCTGCTGTT 204 33 90.9 28 .............................AT.T TGGGGTCCTTCGCGATCAGGGAGACACC 265 33 90.9 27 .............................ATT. TCCTCCCAGCCGTCGTCGCGCTGCATG C [294] 326 33 93.9 28 ...............................CT GCTGGAGCACACCGGCCATCGGCCGCTC 387 33 97.0 28 .............................C... TACAGGTCACGGTGAACCTGATCCCGGG 448 33 93.9 28 .............................C..C CGCCCAGGCGCTTGGGATCTCCCAGCGC 509 33 100.0 28 ................................. TGACGTAGTAGATCACCCGTACTCCGTC 570 33 87.9 28 ............................CC.CT TCTGCTCGGCCGCGGCACGCTGCTCGGC 631 33 93.9 28 ..............................TA. GCGTAGATGTTCTGCGGGAACGCAAAAT 692 33 90.9 28 .............................TTC. CGTCACGGTGCGTGGACCCGGTGACAGG 753 33 90.9 28 .............................ATC. GCAAGGGCGGCAAGTCTGCCGAGGGTGC 814 33 90.9 28 .............................TA.C GCCCGGCCCACTCCCCCGGCAGGCGGGA 875 33 90.9 28 .............................A.CC TAGGGTCTAGTCTGTGGTTCGGCCGCGC 936 33 90.9 28 .............................C.CC CGGCGATGCGGGGGCTGTCTGTATGTCC 997 33 93.9 28 .............................CG.. CCATCCACCACATCGAGCACGGCCCCGC 1058 33 97.0 25 .............................A... ATATCAGCCTGCGGAGGCGTGGCCT CGC [1087] 1119 33 93.9 28 ...............................CC ACGGCGCGGGGACTGATGTACGCCTGGC 1180 33 90.9 28 .............................TGT. GCCTTGTCGTTTGCCCGATCTGCCGTGG 1241 33 90.9 85 .............................A.CC TGGGAGGACAATGCGGAACACCCCCGCGTCGGCGGGGAGGACGGTGTCTCCCGGCACCGAGGCGGCAGGGCTCACCCTGGGCCGC 1359 33 87.9 28 .............................TACA TCCGGGCCAGACCGTCGGCGGCGATCTG 1420 33 97.0 27 ...............................A. AAGCCGGCGAGGCACCCTCCAGTAACA C [1449] 1481 33 93.9 28 ..............................T.A TGCGGATGGTGCCGCCGGTCCAGGACGA 1542 33 90.9 28 .............................CGA. CGCCGTGTTGACCCCTCAAGGTGCTGCT 1603 33 97.0 25 .............................A... TTGACGTCGTCGTGCTCACCATGAA CGC [1632] 1664 33 90.9 28 .............................AA.C GCAGGGTGGTGATCTGCCGGCCGAGGTC 1725 33 100.0 28 ................................. CCACCTTGCCGGTCGACGTGGTCGGGAG 1786 33 93.9 28 .............................T..A CCTCACCGGCCCGGGGCGACTCGGGTTC 1847 33 93.9 28 .............................AT.. ACGAACTGCCGGTCCCGGCCCCGGTGGT 1908 33 100.0 28 ................................. TTCGGGCGGAGGTGAGCTACCGGCGGAT 1969 33 93.9 28 ............T..................A. GCCACCTCGACCTCACCACCGCCACCGG 2030 33 100.0 24 ................................. CTGGTCTCCGAGGAGGTCGGCTAC TGAT [2059] 2091 33 97.0 28 .............................T... GGAAGGTGGGGTTCGGGTCGGTGACGTC 2152 33 93.9 16 .............................T..T CCGCGGCCGGCTCGCG Deletion [2201] 2201 33 75.8 28 .AA..A.GG....................TA.C TGCTGCCGCTGGCGTCCCGGCAGTACGC GGGT [2211] 2266 33 97.0 28 ...............................C. GCGGCCACGAGCGCCGGGTACTCGTCGA 2327 33 90.9 28 ..............................TCC CGGACGACCCGGCCGACCGCGCCGCGGC 2388 33 87.9 28 .....................A.......TT.T CCCGGGGGATGTACGGGCTGGCACGGGT 2449 33 87.9 28 .............................TTCT GGCCCGCCAGCTCCAGCCCGATCTTGGC 2510 33 90.9 28 ..............................GCA TGCGGGGGGTGAAGCGCCCGAAGGTAGG 2571 33 93.9 28 .............................CG.. TGCGGCGGGGTACGACGGTCTCGCATTC 2632 33 90.9 28 .............................CA.T GCGGCGAGTGGCCGAGCTCGTTGTCGGC 2693 33 87.9 28 .............................ATCA ACATGGCACTGCCCACCATGACCGGCGT 2754 33 90.9 28 .............................TTC. GGCTGTGGGCTGTGCCCACCGTGGCCGC 2815 33 93.9 28 ..............................AC. CGGTCTTCCGGGACACGTCCGGGGCGCA 2876 33 93.9 28 ..............................TC. AGCGATCCGCCGTGGTGCATGAGGATCG 2937 33 90.9 28 .............................CT.T GGAACTCGTCATGCTGTGCCTACCTCCT 2998 33 97.0 0 ...............................T. | C [3027] ========== ====== ====== ====== ================================= ===================================================================================== ================== 49 33 92.8 29 GTCCTCCCCGCCGACGCGGGGGTGTTCCGGCGG # Left flank : GACTTCGCCACCGCCACCGGG # Right flank : GATGGCGGCGCAGCGCGAGAACACGTCGGTCCTCCCCGCCCCCGCCGATCTGCGGCCGTCCGTACCGGACTGGCCAGTGACCCGCCCGTCGTGACACAGCCGGAGGCCCTCACCGATCGGCAATCGGTGAGGGCCTCCGGGCGTTCAGAGTGCGGGGCCGAAGCCCCAGCCGGGATCCGGCTCCTGACGATGTGCGCGGAACGCGGCGGTAGGTGTCATGGGCCGGGAGCATACGCCTGGCGAACCCCGCGAACATCGCCGGACTACAGAGACGGCAGATGCGGCTTCAGTAGCGACCACTCGCAATTCTTCAGATCTCCCCGACCCATGATCCAACCAACGAGCGACCGGCCGGAAAGTCATATGATCCGTCGGGCAGTGCCTAATCGCGCGCGGCCGCCCACTGCTGTGGGCGGCCACGTTTCTCGCCGCTGCCGGCCCTGCTTGGCGGCGGGCAGAGGGCCTGCGTCAGCTGGATGAGGAGACTGCTATGTCCTTGA # Questionable array : NO Score: 4.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:-0.12, 8:1, 9:0.11, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGGCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,1.01 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 145-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENSG010000304.1 Streptomyces sp. MBT51 scaffold304_size2977_cov190.0302, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 144 33 100.0 28 ................................. CGCCGGTCAAGACGTTCGCGGCGGCCGT 83 33 90.9 28 ..............................CGC CGGACGCTTCGGCGACTTCCCGCAGTGC 22 22 66.7 0 ......................----------- | ========== ====== ====== ====== ================================= ============================ ================== 3 33 85.9 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTTCG # Left flank : TGGAACCCCGACAGTTTCCCGATGTCGTGCAGACCGGCACACAGCCCGACGAGCGACCGAGCACGATCCAGCTCCCCGGCCAGACCCATCCCGTCAGCTATACGCGCCCTCTGGTTGCCCGCCAGGTACACGTCCCACAAGTGAAGCGCCATCGCGGCCGCGTCAAGAAGGTGCCTTACCAGCGGGTAGGGAGGCAACGCCGGATCCAGCCCACGCGACTTCCCCCACACCGACTCATCCAGCACGTTCTGCCTGGGCAGCACGCCCACCACCTCCACACCGTTACTCGGCCCGGAAGCGGAAGCAATACCGCTGCCGATCGCATCCAAGCAAAGCACCCGGCACTGACAATGACCGTCGTGTGGGGGATCCGTGCTCACCTCAGCAACTCTGCCAGCCGCAGATGGATAAGGTGATGCCATGCGACTGATTGAGCGCCTCACTCCCTCGCGAATGGCAAAGAAAACGCAAAGCCCTTCCTAAGGCGCAGGTCAGGAAGT # Right flank : G # Questionable array : NO Score: 4.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.30, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //