Array 1 1-419 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893207.1 Spirosoma panaciterrae DSM 21099 B153DRAFT_scaffold_40.41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1 29 100.0 36 ............................. TTTTTAATCGTGTGTAACTCCTCCTGAACCTCGGAC 66 29 100.0 37 ............................. TAGTAGCTCGGCATCCAGGGAAATATCTTTGAGTAGT 132 29 100.0 35 ............................. CAGGTAGTACCGGGCCAGGGAGAGTTGTTTTCTAA 196 29 100.0 36 ............................. TTAATGGGGGGCAGTAAAGGATGGTTAGCGCGTCTA 261 29 100.0 37 ............................. CTGACCAAAGTGTTGCTCCAGCAGAGCCTACTCGACC 327 29 100.0 36 ............................. GAAAATGTCGAGTTCTCAGGCGAGCGGCCAGCGCCT 392 28 96.6 0 ........................-.... | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 99.5 36 GTATCAATCGCACCTTCGGGTATTGAAAG # Left flank : | # Right flank : GTTCAGAAGACCCGGTTTCAAATTTTTGTTTCCGTGGATTGGAACCGAGATCAACTTTTGAACACCAGCTTTCTTGAAGGTTTTATGGCTACTTTCCTGCCGAACCTCAAGCCAGCAGCTTGAAACGCTTGATTGATCCTTCTTTTGCAGGACTTTATACTATCGATTATAGGAAAAGTAGAATCGACGAACGTGGTATACAGGCTATTTAAGGAGATTCTACTGCTTTGTTAATGAATCGTAGTGAGCTAGATAATTAAGACACCAGCAGGAATATAAAATCAAAGGTATGCAAATACGTATGCAAACGAAAAACCGTCAACATTGCTGAAGACGGTTTTTCGTTTGTAACTATCTGATTTTGAGAGAGCCAGTGGAGGGATTCGAACCCCCGACGCGCTTGCGCATCCTGATTACAAATCAGGCGGAATCGACCGCTATCCGACACTGGCAGTCCTGAATTGTGGTGCAAAAATAGAGTTATTTTCTATTCCATGCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATCGCACCTTCGGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.10,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 37429-35327 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893191.1 Spirosoma panaciterrae DSM 21099 B153DRAFT_scaffold_26.27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 37428 29 100.0 32 ............................. CTCTGAGAGTAACTCACGGTTACGCTTAGTAC 37367 29 100.0 32 ............................. CCCTGCCGGGTCTTACCGCGCAGTCGATTCAA 37306 29 96.6 32 ............................C CAGTCAGGCCACTACGGTGCCGTTAGTGTACC 37245 29 100.0 32 ............................. TTCGGATCATCCCCCAACGCATCAGCCAGTTC 37184 29 100.0 32 ............................. ATTCGCGGCAAACAGCAGTCGGTACCGAATCT 37123 29 100.0 32 ............................. ACCAGGCGCTTTTTGTCGGCTCCCTGTCCCGC 37062 29 100.0 32 ............................. GGTCAGGTCGAAGCGTGGCAACTGGCCGAACC 37001 29 100.0 32 ............................. GACAAGCGAATGCCTATGTCCGAAACCGAATA 36940 29 100.0 32 ............................. CCATTAAGGTTGTAGCCACCACCCGGAAAGCA 36879 29 100.0 32 ............................. CCATAGCTGCCGATCAAAAGGCTAGGACGGTC 36818 29 100.0 32 ............................. TACCAGATTGCCTCGTAGCCGAACCACACCGC 36757 29 100.0 32 ............................. ACGCCCATCAATCACGGTGGCGACCCGTGGGA 36696 29 96.6 32 ..............C.............. AATCGCTTGCCCTTATAGTGTCTTACGGTTTT 36635 29 100.0 32 ............................. ACCCCCATACGGCCTATAATAAGCAGGTCGAT 36574 29 100.0 32 ............................. AACCGCCAACCTTAACCATTGCCGAAGCGCTG 36513 29 100.0 32 ............................. GTCGTAGGGGAAGAATTTGCCCGGGGGCTCGC 36452 29 100.0 32 ............................. AACAAAAACCTTTGGTTAACTGATGAACAGCG 36391 29 100.0 32 ............................. TCTACCGGATTTTCGCCAGCCAATTTGTACTT 36330 29 100.0 32 ............................. TACTTGTTCATGCGTAAGTGTTATATGAATAA 36269 29 96.6 32 .............G............... TTGATAACTAAACCTGACGGCCGGGAAATAGA 36208 29 96.6 32 .............G............... GCTGTGTACTGGACCAGGCAGAAGCGCAAAAA 36147 29 96.6 32 .............G............... AGTCGATTTCTTTTCCATAGTCACGACCATAA 36086 29 96.6 32 .............G............... AACAGACAGAGCAAAAACAGAGCAAGGCTGCA 36025 29 96.6 32 .............G............... GCTGGCTCGACATTAAAATCATAATAGCCGTT 35964 29 96.6 32 .............G............... GGTAGCCGTGTATATAGCGCGTTGTAGAGCCA 35903 29 96.6 32 .............G............... TACCGCAGTGGCAGAGTGGCCGCAATGGCATC 35842 29 96.6 32 .............G............... CTATGTTGCTGGTCAGATGGGCATGAATCCTC 35781 29 96.6 32 .............G............... CAGGTAGAGGATCAACTCAAAGAGCTGACCAA 35720 29 93.1 32 .......T.....G............... GGAGCGGAAGAGCGGTGGAGTATCGCCAAACT 35659 29 96.6 32 .............G............... GCCAGCCAGGCCAAACCATCGAAAGCCGGGAC 35598 28 93.1 32 ........-....G............... AAAAACTCGAACTCGATGTACTTCTGGGCATC 35538 29 96.6 32 .............G............... GCGGCATTCTGAGCGTCCCGGCCGGGTATTCG 35477 29 89.7 32 .............G.A............A GCCCTGTGAAGTTTGCGCCTACGACTAACTAT 35416 29 96.6 32 .............G............... AAAGCCGAACAGATTCGCGATATGAGTCTATC 35355 29 96.6 0 .............G............... | ========== ====== ====== ====== ============================= ================================ ================== 35 29 97.9 32 CTATTCCCCACTCATGTGGGGATGAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATCATACGACACCTCAAAAATGAGCCCTGAAGGGGTACTATCGCTCGGCGTGTAGGTTGCTCGCGTTACATTCTGTCCTGTGATCAATGTACAGCTATACAGTCAACTGAAGCGTAGCGACCTATTCGATAATTCAGCAGGTCGGCAATTTAGCATTGAGTGGAGGGCTCATTGTCTGCCTGATAAAGCGTAGATGTATGGGTCATTTTAACTGAAATAGTTTCAGAAAGGTGAAGGGTGTATCAGGATCAAAGCCATCCAATTCAGTATTGGAATTAAGAAAACACCTCATTAAACGATACAATTACATTCGTTTGTTTAATTTATTTAGCTTTCATTATATATATAATCCATTTTTTATAACACAAATATTTACACTATAACTAATTATATATAATACTACTAACTTCCGGCTGTAAACCAAAACAGCCAATGACAACTCATTACCTCAATTCAGATGACAGTAAGCTAATCAAGCTTTTCCAGCAAACACAACAACA # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.72, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCCACTCATGTGGGGATGAACCG # Alternate repeat : CTATTCCCCACTCGTGTGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTATTCCCCACTCATGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 39542-39391 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893191.1 Spirosoma panaciterrae DSM 21099 B153DRAFT_scaffold_26.27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 39541 29 100.0 32 ............................. CATGGGCCGAACGACCGGATTGGTGGGCAGGA 39480 29 100.0 32 ............................. CCCGACCGTAACGGCTGGTATACCATCGGTGC 39419 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CTATTCCCCACTCATGTGGGGATGAACCG # Left flank : GTAGGGCAAACCCTGGCATTTCGGCTGGTAGCGAATCCGACAAAAAAGGAAAAGCGGGAAGGCAAAAGTCAGGGGCGCCGGGTTGCACTGCTCAACATTGAACAGGAAGATGGCTCCACACCTGCCAATGTCTGGCTGCGTCGGAAAGGAGAGCAGCATGGTTTTCAGGTGTTGTATGCAACCACTGATGATTTCTGGCTGGGTGCTGACCGACGCAGCCAAGGTAAAAATGCGATTCCACTTTATGGAGTTCGTTTCGACGGTTTATTGCAGGTGTCTCAACCTAACCTACTGCAACAGGCCTTGATAAGTGGCATTGGCCCAGCTAAGGCATTTGGTTTTGGGCTAATCTCAGTAGCACGACCCCAATAATTTCCCAGCATAAACCAGCCAGTACCCATTGATTCGGTGGTACTGGCTGGTTTTATATGCCTATGTCTGCCTTATGACATAAATGTTCTTTGACCCGCAAAAACCTCATTTTTACGCAAATTTCCAGT # Right flank : TTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCCACTCATGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTATTCCCCACTCATGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 49956-52972 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893191.1 Spirosoma panaciterrae DSM 21099 B153DRAFT_scaffold_26.27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49956 29 100.0 32 ............................. TAGCGATCATTCATTTGAGACATTAACCCTTT 50017 29 100.0 32 ............................. CCACCATACCCGCCAGAATGGGCAGTAACAGG 50078 29 100.0 32 ............................. ACTTCCGGGGCTGGGCCTTCGATCCGGCTAAT 50139 29 100.0 32 ............................. AGCAAGAACGAAACAAGGAAATGCTGCGGGAG 50200 29 100.0 32 ............................. TACCCTGTTCTCGGTAAAATACTTGTTGGTGC 50261 29 100.0 32 ............................. ATTATAGCCCATGTCTCTAGCTTTTTCTTGAA 50322 29 100.0 32 ............................. TGAAATAAGTCAAGCGACACGGAAAAGCCGAA 50383 29 100.0 32 ............................. GGCTGAGGGGTACAGCTACGAGGAACTAGCCG 50444 29 100.0 32 ............................. ATGTGACAGTCACCTCAACTGGACAACTCGAA 50505 29 100.0 32 ............................. GGCTGAGGGGTACAGCTACGAGGAACTAGCCG 50566 29 100.0 32 ............................. ATGTGACAGTCACCTCAACTGGACAACTCGAA 50627 29 100.0 32 ............................. GCTTCGGAATTTATCCGAAGCCTTAAAACCTG 50688 29 100.0 32 ............................. GCGGCAACACTGGGTTTGGCCTGGGTTTTTAC 50749 29 100.0 31 ............................. AGATAAAACGCTTTTGAGTTGGGGGATGTTT 50809 29 100.0 32 ............................. AATTAGTTTATATAGTACACGAGCAAAAGATA 50870 29 100.0 32 ............................. AACCGTAGCTGCGGCGACTGCTGCCTGTTTGA 50931 29 100.0 32 ............................. GATGCAGTAGAGAATAATGCCTGCGTAGATAA 50992 29 100.0 32 ............................. GCCCACAGGGACCTCCAGGTACAGGTGGATCG 51053 29 100.0 32 ............................. TTTGCTGTACTCGGTAGCCAGCCGGGCGTTTT 51114 29 100.0 32 ............................. AAGCAGGTGACGGGCGGGAACTGTGGATCAAA 51175 29 100.0 32 ............................. GACCAGCGGAACGGCGCTGATGAGTAGCCCTA 51236 29 100.0 32 ............................. TGTTGCTGTGCCGCCACTGATCGAAACCGCAC 51297 29 100.0 32 ............................. GCGTATGGATTTAAACCGGACGGTTCCCGGGA 51358 29 100.0 32 ............................. GCCAGTACCATAACCCCGAGTCCAGTGAACGC 51419 29 100.0 32 ............................. ATCCAGTTTATCGGCGTTGGTCATCGTGAAGG 51480 29 100.0 32 ............................. AATCAAGGGGTTTTGTTTGGTTGCAGCAGGTG 51541 29 100.0 32 ............................. TAATATCGCTCGGTTTCCGAGTTCGGCTAGTG 51602 29 100.0 32 ............................. AATCAAGGGGTTTTGTTTGGTTGCAGCAGGTG 51663 29 100.0 32 ............................. TAATATCGCTCGGTTTCCGAGTTCGGCTAGTG 51724 29 100.0 32 ............................. GGTGCCAGACCATCCAGCACCCGGTGGGGTTA 51785 29 100.0 32 ............................. GCGAAATTCCCTGTTATTACAGTTATGCTACT 51846 29 100.0 32 ............................. TCTACCGCCAGCCGCAAAACTGCTATACGGGG 51907 29 100.0 32 ............................. ACATACACTGCCGAAAGGCGAACCAAGGGTGG 51968 29 100.0 32 ............................. ATCGTCTTACCGGTGGCCGGTGGTCTTTAAAC 52029 29 100.0 32 ............................. GGTGCCAGACCATCCAGCACCCGGTGGGGTTA 52090 29 100.0 32 ............................. GACGCATTGGCGATTGATGAACGATTTGTTAA 52151 29 100.0 32 ............................. CCAGTTGAGCCTACAGTTACGTAGTCGACAGC 52212 29 100.0 32 ............................. ACTATTCTGCCGATCGAGCCAGTACTCAGCTC 52273 29 100.0 32 ............................. GTTTCCGTGTCGGAGAGGGGCGAGGTGCGGCC 52334 29 100.0 32 ............................. CAGCTTGCTCGTACCTCATCCGAGCTAAAAGG 52395 29 100.0 32 ............................. GACTCATGAAGCTAGGGGGCTTTGGCGGAGGT 52456 29 96.6 32 .....T....................... CGATTAAGCGCGACAAGATGGATTCAGACGGA 52517 29 100.0 32 ............................. ACATTCAGAAGGATTACACAGTCTAACTAACC 52578 29 100.0 32 ............................. GATACAGGCGAAACGGCACCGGATGGCGATTA 52639 29 100.0 32 ............................. GTAACTGTCAACCTCACGAAGGCCCGTTTTTA 52700 29 100.0 32 ............................. AAAGGTGGTCTTGTTCCAGTCCTATCGACAAA 52761 29 96.6 32 ................A............ GTGTTTGGTCAGGAAAACATCGTAGCGGCCCG 52822 29 100.0 32 ............................. AAAGTAAACTTGGGATTGAAGCTCTGCCCATC 52883 29 100.0 32 ............................. CATATTACGCTCCACCTTCCAGCAGGAGTTAA 52944 29 93.1 0 ....C.....T.................. | ========== ====== ====== ====== ============================= ================================ ================== 50 29 99.7 32 ATTTTCCCTACACACGTGGGGATGGACCG # Left flank : TTCCCGATGTTGACAGGTTGTTGCGTCTGGATGTGGAATCCGAAGCTCCCGATGGCTTCGACCCCGACGATGACCCCGCTTTGCCGACACCCTGGTGGAGCAAACCTGCTTCTATAGATCATAATGTGGCTGGAGCGCTCGACCGGGAGCCGACTAAACCTCAATAGCTATGATGGTGCTAATGGTAGAACGGGTTTCGCCTTCGTTGCGGGGCGACCTGGGGCGCTGGCTGATCGAAGTGCAGGCAGGTGTGTTTGTTGGGCGTGTAAGTGAATTAGTTCGAGAGGCACTTTGGGAGCGTGCGACCAATCGAGTTGATGAAGGAACCGTTACGATGCTCTGGCGAACCAATAACGAACAAGGTTTTGATATGCGGACTTGGCAACCCAGACAGTACGTTCCGATCAATATTGACGGCATCTGGTTAACTTTGCGTCCGGGTGCCAATACATAATGTTCGTTTTAGCTATAAAACAGGCCCATACGCGCAGTTTTTCAGT # Right flank : GCTAAAATGTCCAGGGTCATTGATAAGCGCATCAATCATGAATCGTTGGAGAATGTGGCAGAATGGCTATCACATAATAAGGCCAGCCAGAAGAGAATACCTTGTGGAAAGTCCAATCAAAAAGGAACCATAAAATAAATAGTTCTGAAAGATGGCTTTTAGGGGTTATAGGACGGTGAAATACAGGATAGTAGAATGTGTGGTATCCCTTGTGGTGACCCTAAACGAAAAAACCACTTAACATTTTGTGTTAAGTGGTTGATAATCAGAGTGCACTCGTAGGGATTCGAACCCCAAACCTCCTGATCCGTAGTCAGGTGCTCTATCCAATTGAGCTACGAATGCATTTCCCGTTGATTGGGAGTGCAAAAGTAGGAAGAAAAAGCACGATTGTCAATCTATCTGCCCGAAAAATTTGGTTTTCTTTTCATCAGGAAAGCGCCAATGCCTTCCAGGGTATCGGTCGATCGCCCTAAAGCGTCCTGATTGTCAGCTTCTTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTCCCTACACACGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 3022-1214 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893213.1 Spirosoma panaciterrae DSM 21099 B153DRAFT_scaffold_46.47, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 3021 29 100.0 37 ............................. TTTGTGCTTCCATTGTTTTGTAGTTTCAAATCGTACT 2955 29 100.0 35 ............................. TTCATCAAGCGGTAATATGCCATTTAGCTTGCCAT 2890 29 100.0 37 ............................. CTGCACAATAGGCCAGCGGATACCCCAGTGCAAATAC 2824 29 100.0 36 ............................. TAGTTAATCGGCGAATCAATGCCCAGCAGCGAACCA 2759 29 100.0 40 ............................. TTGTAGGTATATTCCCCTGCCACTCCATCGGTTTGGATAA 2690 29 100.0 34 ............................. ATGTGTACTACGAAGGGGCAAGCCTGGATTACAA 2627 29 100.0 38 ............................. TGTAGCCAGTCTGACGAGCAATCATCTTTTTGTCCCAT 2560 29 100.0 35 ............................. CTACCTGCGGGATGATATGCGACTAGAGCGGCTGT 2496 29 100.0 38 ............................. TCAATATTACGGGGCCAATTCGGGCAGCAATGGGGGCA 2429 29 100.0 35 ............................. ATGGTAAGTTAGTAGGCATTGAACGAATGCCAGGG 2365 29 100.0 37 ............................. TTGCGACCAGCGAATCAGGTGTTACCTACCTCGAACT 2299 29 100.0 39 ............................. GTGCGGGTATCAACATCACATCAGGCGTTATCTCGGCCA 2231 29 100.0 34 ............................. TCGTATTTACCTCAGCCGAGGATGTGGCTGAGTA 2168 29 100.0 37 ............................. TTATCCGATCCGGTCAGGAATTTGAGAGCGGCCGCTA 2102 29 100.0 36 ............................. AAAACGAAGGGTTGCGCCCACGATAATTTTGATTGG 2037 29 100.0 37 ............................. TTTTCATGCCCCCTTTTCCCACTTGGCGTCTGTAGTG 1971 29 100.0 39 ............................. TTGAAAAGATGGATATTCTACACCTGTTTCTGGTCAAGG 1903 29 100.0 38 ............................. TTTTCTGATCAATCTGGCCAATGCGCTGAGTAAGCCAC 1836 29 100.0 37 ............................. TTCTACATGAACCTTGTGACGCGGGTAGCCCCAGCTA 1769 29 100.0 36 ............................. GGAAATTCCCGCGAATGTTTCCTGACCATTGTCGTC 1704 29 100.0 38 ............................. CACTGGCTCATCTGGAGGCCAACAAGTCGACAGTACTA 1637 29 100.0 38 ............................. ACGATTGCATGACGCAGGGCTGAAGCTGGAAACCGAAA 1570 29 100.0 36 ............................. TTGCCACTGTTTCCCAGGTCCCATCGGCTTTATAGC 1505 29 100.0 36 ............................. GATGGCGGGTTTGCCCAGGCTCGGCCGGTTCATTAT 1440 29 100.0 37 ............................. TAGAGCCAGAGCGTAGGCTTGCCGTCCTTGGTGGCAA 1374 29 100.0 36 ............................. CTACAGGTCCCGCGCGGTTGGATATTGATAAACTCC 1309 29 100.0 38 ............................. GAACGTATCGGCCCGTAGCTGCTCTAAGGTGCGGGTAA 1242 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 28 29 100.0 37 GTATCAATCGCACCTTCGGGTATTGAAAG # Left flank : TACTAAATCATTATAATTATGCCGTTTTGTATTGCCGTCTATGATGTAAACCAGAAACGAGTGGGCAAAATGCTCAAATTATTCCGGCGTTACCTGACCTGGGTACAGAATTCAGTTTTTGAAGGTGACCTAACCGTTGGTCAGTTAAAGCAGCTACAACTGGAAGCTGATGCGCTTTTGCAGGACGATGACGGCGTGGTGTTTTATCAGTTTCGCGACGAACGCTACGTCGAACGCATCGCAGTTGGCACTGATGAAGTAAACCGAACGCGGTTTTTATAAGTCGTCAGCCTGTTGAGTTGTGAGATTATTTCGGCATGAATAATGCCTTCTCCACAAGGCATATCTATCCAAATCTGGTCTCACTGCTTATAAGAGCTTTTTATCAAGTCGTCAGCCTCCTGCTTTTTTAGCAGTACTACAGGCTGACGCTTTTTTGTGTTATTTTTAAGCTTGAAAAACCTTCTTAAATGGCCTGTACAGCGCTTTTTTAGAGGTTG # Right flank : CTGGACAAATTCAGGCCCAAACGGAGCAAAAACAGTATCAATCGCACCTTCGGGTATTGAAAGGANAGTATCAATCGCACCTTCGGGTATTGAAAGCTGGACAAATTCAGGCCCAAACGGAGCAAAAACAGTATCAATCGCACCTTCGGGTATTGAAAGGATATTCAGCCAGCGTAATTTCATTCGGTCCGTCCAGGTATCAATCGCACCTTCGGGTATTGAAAGTTTCATTGATGTGCTTTTCGGCTGTGATGGTCAATAGTATCAATCGCACCTTCGGGTATTGAAAGGNGTATCAATCGCACCTTCGGGTATTGAAAGTTTCATTGATGTGCTTTTCGGCTGTGATGGTCAATAGTATCAATCGCACCTTCGGGTATTGAAAGGTATAGTGCCGCCCTGCCAGCGCCACCGGATGCCATCGTATCAATCGCACCTTCGGGTATTGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATCGCACCTTCGGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.00,-2.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //