Array 1 710034-709344 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOFO01000001.1 Cyclobacterium sp. SYSU L10401 NODE_1_length_1221673_cov_162.497200, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 710033 30 100.0 36 .............................. TACGGAACTACTAACACCATAAATATCTCTTCCTAT 709967 30 100.0 36 .............................. ATTCCGGCGGATCGAATACTGCGGAAAACTCGTCAA 709901 30 100.0 36 .............................. ATATCTGCGACACGAAGGATTTGACCTACTTCCAGT 709835 30 100.0 36 .............................. ATTGCAAAATGGTTTACTATTCAAATTAGATACCTT 709769 30 100.0 36 .............................. TGTATAGCTGAATAAGTGTTGATCCTCCCCATTGGC 709703 30 100.0 35 .............................. TTATTTCGATGGATCATGTACGTGAAAGCATGTTT 709638 30 100.0 36 .............................. AACCCACCATCAATAGGGCCATTAGAGCCGAACGAT 709572 30 100.0 36 .............................. TATCAGGTAGAAATGGATTTTAGCAGGAAGAAAAAC 709506 30 100.0 36 .............................. ACTTGAAGAGGGGGAATTAACACCAGAATTGGAAAA 709440 30 100.0 36 .............................. CCACAATAGGATTCTATTTCAAATCCTTCTTTTTTA 709374 30 90.0 0 ..........................G.CC | A [709347] ========== ====== ====== ====== ============================== ==================================== ================== 11 30 99.1 36 CCCTTAATCGCACCATACAGGAATTGAAAT # Left flank : ACAAGAATTTGGCCTATTTTTGTTTGCAGGCCGACGGCCCTTAATCGCACCATACAGGAATTGAAATTCTGCTATTCCAAGTTTACCAAACTGATTAACCGCCCCCTTAATCGCACCATACAGGAATTGAAATATCATTATCAGGCAGCCCTTCGATCAGCCTATTAATCCCTTAATCGCACCATACAGGAATTGAAATAAAGCTACTTGCAAAGATATTGAGGGCAATGGCTGACCCTTAATCGCACCATACAGGAATTGAAATACAATTAACAGGACTGGAAGGGAATGAATTGAAGGCCCCTTAATCGCACCATACAGGAATTGAAATTACGGAACTACTAACACCATAAATATCTCTTCCTATCCCTTAATCGCACCATACAGGAATTGAAATATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC # Right flank : GAGCGTTAAAAAAAGCCCCAGTGAGGCTTTTTACCGAGAGCCTGTCCCGAGTAACATAGCGAATCGGGAGGCCGGGTGGAAGGGCCAGCGCATAAATTGATTTCTTCCTTCCAATCTCCTTCAACTTTTTTACCTTTGCGCCATGAAAACCCGTCCTTTTACCTACCTGATTCGCATCCAATACCTGGGCCTGCGCTACCATGGATGGCAGGTGCAGAAAGGAGTGAAAACCGTGCAAGGAACCCTGGAAAAATGCATCAGGTTCGTTTTAGGACATGAAGATTTTAATGTTCTGGGAGCCAGCCGAACCGATAGTGGGGTTTCCTGTCTGGATGGTGCCTTTGAATTATTCCTCAGACAACCCCTGGATATTTTACCCTTTATTTCCGAAGTCAATACCTATCTGCCAACAGATATCCGCCTATTGACTGGTCAGGCAGTACCCGTTGATTTCAACATCATTCAGGATGTGCGGGAAAAGCAGTACGGCTATTATTTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTAATCGCACCATACAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 710497-710137 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOFO01000001.1 Cyclobacterium sp. SYSU L10401 NODE_1_length_1221673_cov_162.497200, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 710496 30 100.0 36 .............................. TCTGCTATTCCAAGTTTACCAAACTGATTAACCGCC 710430 30 100.0 36 .............................. ATCATTATCAGGCAGCCCTTCGATCAGCCTATTAAT 710364 30 100.0 36 .............................. AAAGCTACTTGCAAAGATATTGAGGGCAATGGCTGA 710298 30 100.0 36 .............................. ACAATTAACAGGACTGGAAGGGAATGAATTGAAGGC 710232 30 100.0 36 .............................. TACGGAACTACTAACACCATAAATATCTCTTCCTAT 710166 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 36 CCCTTAATCGCACCATACAGGAATTGAAAT # Left flank : AATCACACATTAACTCATTAGCATGTACATCATTCTGGTTTACGACATTGGCGAAAAGCGGGTTGGCAAGATGTTAAAGCTCTGCCGGCAATACTTGAATTGGATCCAGAACTCCGTGTTTGAGGGAGAAATCACAGAAGTAAAGTTGAAAGAACTTATCAGTCAGGCCAGGTTGTTTATGAAGGAAGAAGACGACAGTTTAATTATTTTTAAGAGCCGGGAGCAGAAGTGGTTGGAAAAGGAAATCATCGGCCAGGACAAAAATGACCTGGACACGTTTATTTAGGGGTTTTGGTTGTCGATCAATGGGACACTGTGGAAATTTTACGGAATTTACCCCTACCCAGGACCCAATAATCCCGGATTCAAGCCTTAGCGGCTGGTTGTCGAATACAGGGAAAAATCCTGTTATTGGGCATCGACAATCTCCGTGCAAAAAACCAAAGAGAAAAGCCTTTATTTTACAAGAATTTGGCCTATTTTTGTTTGCAGGCCGACGG # Right flank : ATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTTAATCGCACCATACAGGAATTGAAATTACGGAACTACTAACACCATAAATATCTCTTCCTATCCCTTAATCGCACCATACAGGAATTGAAATATTCCGGCGGATCGAATACTGCGGAAAACTCGTCAACCCTTAATCGCACCATACAGGAATTGAAATATATCTGCGACACGAAGGATTTGACCTACTTCCAGTCCCTTAATCGCACCATACAGGAATTGAAATATTGCAAAATGGTTTACTATTCAAATTAGATACCTTCCCTTAATCGCACCATACAGGAATTGAAATTGTATAGCTGAATAAGTGTTGATCCTCCCCATTGGCCCCTTAATCGCACCATACAGGAATTGAAATTTATTTCGATGGATCATGTACGTGAAAGCATGTTTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTAATCGCACCATACAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //