Array 1 2214551-2215067 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXUX01000002.1 Pantoea agglomerans strain GR13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2214551 29 100.0 32 ............................. GCAATAATAGTGACAAGCGGGACGATAACAAC 2214612 29 100.0 32 ............................. TTGAGATGTATGCCGCAGGTGGTGGTGGTGCG 2214673 29 100.0 32 ............................. AGAATCCAGTGCGTCTTATCGCTTTTGCCAGT 2214734 29 100.0 32 ............................. GCGACTGGACCACACTCACAGCTCAGTTTCCG 2214795 29 100.0 32 ............................. GTGATCGCCTGTGGGTGCGTGAGACGTGGTCT 2214856 29 100.0 32 ............................. TCCATCACCGTCGATAGTCTCGCCATCTTGGG 2214917 29 100.0 32 ............................. TGCATAAACCAGTTCAGCCTCTTTGATACCGG 2214978 29 96.6 32 .........A................... CCGTCTGAGTAGGCGGCTTTACGGTGTCACTC 2215039 29 79.3 0 ........T..A.C..G...T.......T | ========== ====== ====== ====== ============================= ================================ ================== 9 29 97.3 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : AGGGCATCAGCTACGAGACCTCCACCTTCCCGTGGGCAGCCTCAGGCCGTGCTATCGCTTCTGATTGTGCAGACGGTATGACCAAACTGATTTTCGACAAAGAGACGCACCGGATTATTGGTGGCGCGATTGTCGGTACTAACGGCGGCGAGCTGTTAGGCGAAATCGGTCTGGCGATTGAGATGGGTTGTGATGCGGAAGATATTGCGCTGACCATCCACGCTCACCCGACCCTGCATGAGTCAGTCGGTCTGGCGGCAGAAATCTTCGAAGGCAGCATCACCGATCTGCCTAACGCGAAAGCGAAGAAGAAATAAGTTTCTGCTATTAAAGGAAAAAGCTCCCGTTATGGGGGCTTTTTTTTCGCCTGGATTCTGGTGCTGTACATGCCGGATTCTGTCCTGGATATTAAGTGTGCATTCAGGTTAACTCAGGGTATAAAATCTGGTGGAATTATCAAAATTGAAAAAATGCATTTTAATCAGCAGGATAGTTTCAGA # Right flank : TTATTAAAACTAAGCATCTGATTAATAAAAATTGATATAGCCTGATTATCACCTAGGAAAAATAACCCTAATTCCTCTTAAAACGTTGTCTTGCGGAGTTATTGGGGTTATCTTTATTTCAAGGGAATGCGATAGGACACAGGGATGGAGAGCAGCAAGTTAATTGCAGAAATCAGGGCTGATGGCTGGATTTTGATCAGGGTAAACGGTAGCCATCACCATTTTACACATCCTACGAAACCGGGGCTGGTTACAGTACCCCATCCCAAAAAGACTTACCAATCGGTACGGTAAAGAGCATCAGGAAACAAGCGAGGATTTAATTCCGCTTGCCCGGAGAGGTTTGAATATGTTTTATCCAATTGCAATTGAAGCTGGTGACCACGAACACGCATACGGCGTAACCGTTCCCGATTTGCCAGGGTGTTTCTCAGCTGGTGATACTCTGGATGAAGCCATCAAAAACGCAAAAGAGGCCATTACAGGGCATATCGAATTAG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //