Array 1 46826-47655 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBPX010000007.1 Phocaeicola vulgatus strain FTJS5K1 Scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 46826 33 97.0 34 ................................G GTCTTCGGGGCACACCATTGCTGTCCAATATCCT 46893 33 97.0 33 ................................T TGTAGTTTTTTTTGCACCAGATGAAACTGATAC 46959 33 97.0 33 ................................G TTTTTTAAAGATGAGGCTATCCGTTTGGGTAGT 47025 33 100.0 35 ................................. ATTAGCAAGAGTTGGAATTATGTCATCTAAACCTT 47093 33 100.0 33 ................................. TGAAGTGGCTGCCGCCGGAGGTATGTGCCGGGG 47159 33 97.0 32 ................................C ACCGCCTCCTGTCGTGCCTGTATCACTCCAAA 47224 33 97.0 34 ................................T AGACCTGTTTAGCATTAACAACCAGTATGCACCG 47291 33 100.0 32 ................................. CAAACTTGACGGATAAGAGGAATGATAACAAA 47356 33 100.0 32 ................................. CAAACTTGACGGATAAGAGGAATGATAACAAA 47421 33 97.0 34 ................................T CCCAGGACATAACTATAGAAGGCAGGAAATACGC 47488 33 93.9 34 ...........T....................G GTCTGTATGTCGATGAGCCGGATTTCTTCGGGGA 47555 33 100.0 33 ................................. CCTTCGACTACCTGGAGGAGATACCTGCACATG 47621 33 93.9 0 ....................A.........G.. | TA [47640] ========== ====== ====== ====== ================================= =================================== ================== 13 33 97.7 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : ATTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGCTTATTTGTTATATTATTGATTATTAATGTGTTGTTATCTGTTTGTATCGATTGTTTTTCTTATCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGAA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //