Array 1 131159-132392 **** Predicted by CRISPRDetect 2.4 *** >NC_015519.1 Tepidanaerobacter acetatoxydans Re1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 131159 30 100.0 36 .............................. TATTTTCTTTTTTTATGCATCATAGACACTTCAAGT 131225 30 96.7 37 A............................. GGGAAAATACAGGTAAGGAATTGTTTATAAATGCGAA 131292 30 100.0 36 .............................. TCACCAGGAACAAAATCAATTTCAGCAATCGATGAA 131358 30 100.0 37 .............................. AACGATATAAAAGTCAAAGATACTGATGTCATAGTGG 131425 30 100.0 38 .............................. TCTCTTTCAGCAAATCTACGGGCTATCCTCTTGGCGTA 131493 30 100.0 37 .............................. GTGCTGAGCCGCTAAATGTGATTGTGCTGTTTACTTT 131560 30 100.0 37 .............................. TCTGTTCCGTATCCTTTTTGCCATAAACCAGTTTTGT 131627 30 100.0 35 .............................. ATTGCTTCTTCAACACCTTTTTCAATTCCAGTGTG 131692 30 100.0 39 .............................. GTAGATAGAAACCCATACTTAGATAGAAGCCTTCTTAAC 131761 30 100.0 38 .............................. ACCAATGCAGTTAAATAAACTTTTTAATGATCTACTAA 131829 30 100.0 37 .............................. GTAATTATGGGGCCTTTTATTATCCTAACGTCAAGAG 131896 30 100.0 37 .............................. CATTTTATGCAGAAGAGGATGGATTAGACTTTGAAGA 131963 30 100.0 38 .............................. TCTTCTCTCCGTTGTCTTTGTTTCGCTGTCTCCCTCTC 132031 30 100.0 36 .............................. GTCCAATCGGTCTTTACCTCCACCATTTGAAACCTC 132097 30 100.0 36 .............................. TCATCATGGTTATCCAGCTTATTAACGAGCTGGGCC 132163 30 100.0 36 .............................. TATCATCAGCCGCCGCTCCTTCCGCCGGTATGAATT 132229 30 100.0 36 .............................. TTTGGTATGATTTTCAGGGTGTTGGTGGTAGAACAG 132295 30 96.7 38 .....................G........ AAATATTCTTTTTTAAGGCATCGCATATCCTCAAGCAA 132363 30 73.3 0 ...GT..A.A.........A.GC......T | ========== ====== ====== ====== ============================== ======================================= ================== 19 30 98.2 37 GTTTATAGCCTACCTATAAGGAATTGAAAC # Left flank : CAAAAAAAGCCTACAATGCTCTAAGCTTAAGAGATTATGCCAGAGTTGACGTAAGAGTAAAAGACGATACTCCATATGTCCTTGAGGTTAATTCATTACCAGGCCTGCAAAAAGGCTATAGCGATATCACCAAAATGGCCAGTGCCTGCAATCTAGGCTATGAAGGCCTTATCCTTAAAATAGTTGAAAATGCCATAAATCGCTACAAACAAGCCAGTGAACAAAAGGTAGTATAACCTAAAAAATCAAATAAAAATCGTCAACCATCTCCGACCAGGGCAGCATATATAATTTGACATGCAACATGCTTTTACGCAATTAATGTCGTCGACCTCCGATAGCGCAAAAACCCCTGGAGATCGACGACAACCCAAAATTACCCCCAAATAAAGAATATTACTGGAAAAGAAGGACTTTTCGATTTAATGCAGAAATTATTAATAGAAAATTGAACAAATTATTTTTCTCGCTCTTTCTTTATTTTTTACCCCAAATTACGG # Right flank : TAACACCGTATGTAATATATATATTTGGTTTATGGTTTTCTATGGATGGATGTGCATTAAAAAAATATGTGTTAATGTGTAGAGGCGGTCGATGACCGCCTCTACATGTTTGCAATTCCTATATGGGAGAGAAGCCTGCAGTGTAGAAAAAAGATGGGGTACCGGCAAAAAAAGGTTTGTAATTCATATATTGCAGTCAAGTAGGGGAGACCATTGGTCTCCCGCTTATTACTCATTATTGCCTTTGGTCGCCAGCCTGCTTATCTAGAGCCTTAGGGCGCATTTCTTTTGATTTATATCTAGCATTTAAAGAATTAGAGAAAAAAATCACTTTTAGGCAGGATTTTTAGGTAAGTTAGTCGAAATATTTCTTAAATATCAAAAAAATTTTAATAATAAGAGGTGAGATAATTGGATATTTTTACTAGTTTTACTGATCTAGTGCTTTTGGTTGGAACAAATCCTTTGCCAAATTATATAGTAATAAAGTATTTTTTAAA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 142412-143040 **** Predicted by CRISPRDetect 2.4 *** >NC_015519.1 Tepidanaerobacter acetatoxydans Re1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 142412 30 100.0 36 .............................. TGGACTTAAAGTTCATCCCATCGCTGTCGCAATGTG 142478 30 100.0 37 .............................. ACGACATGAACCAACCAGCAGAGATAACAGATACACA 142545 30 100.0 38 .............................. TTTGTTATTATAAGGCTATTATGTTCTTTACATCTATA 142613 30 100.0 38 .............................. CGGAAGCAAGAGAACCAATTACAATAACATTCAAAGGA 142681 30 100.0 37 .............................. CTTGCAACAGTGTGGGAACCAAAAAGGAACTTTAGTG 142748 30 100.0 37 .............................. TTTTTTTACGTAGGCCGTTGTAATCCCTAATGATAGC 142815 30 100.0 36 .............................. TTCCCAACCGCCCCAGGATCTTTCCCGCCATGCTAA 142881 30 100.0 35 .............................. TTTCTTGTGATGATCTTGATACATTGTAGTTAGGG 142946 30 100.0 35 .............................. CGTCTCCAAATTCGTTGTATTCTAGACCTATACTG 143011 30 93.3 0 ............................CT | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 99.3 37 GTTTATAGCCTACCTATAAGGGATTGAAAC # Left flank : AGGATTATCTAGAAGAAATTTTTTGTTGGCTAAAAGAACATTCAAAGCCAAATGATATAGTATTAGTCCAAGGAGAATTTGGAGCGGTCTTTTTAACGGCTAACTTTTGCATAAAAGAAGGACTTGTTCCTATATATTCTACTACTAGAAGAGATGTGGCAGAGACAATTCTTGATGATGAAACCATTCAGACGAAACGAAATTTTATCCATGTAAGATTTAGAGAGTTTGAAAAATGGGACTAAAATTTTAAAAAATATCTTATGGGTGAAGAAGAGTAATAAGCATTTGTAGCAAAATGGTAAATTGTATATTCTAAAATTGTCGTCGACCTCCGATAGCGCAAAAACCCCTGGAGATCGACGACAACCAAAAATTACCCTCAAACAAAGAATATTACTGGAAAAGAAGGACTTTTCGATTTAATGCAGAAATTATTAATAGAAAATTGAACAAATTATTTTTCTCGCTCTTTCTTTATTTTTTACCCCAAATTACGG # Right flank : TTTCTTATAACTCTATAACCTTGGCATGAAAGGCACAGCAGCACTTGAAATTATGGAGGTAAAAATGAAAAAATATTGTATTATCATACTTATTGTATGTATGATGCTTGTGCTAACTGCTTGCGGGAATCCTAACAGTGAAGTAGTAGGCGAATATGATACAAGCAAACTTGGAGGTGATTTTGTTAAAAGCAGTAATGAAGCTTATGCTATAGGAGCTAATAAGGATAAAATGCCGGTTTTTAAAGATACTGACAAAGCTTTTAAACAAGCCCTTATTGATTATGCAGAGGGATTTAAAGCCATTCAAAAAGAATTTAATTTAAAACCGATTAATAAGAAAAACTGGGAAGCATATAAAACTTATGGATGGCAATTATCTGCTGATAATGATGAGGAAATCCGCAAACAGGGAAGGGAGATAACGCAATTTTTCGATATATATGAGAACAGTTTTAAGTAAATAAGTGGTCTTCATATCAAAAGTATAAATAAATTCA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGCCTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 3 147435-148400 **** Predicted by CRISPRDetect 2.4 *** >NC_015519.1 Tepidanaerobacter acetatoxydans Re1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 147435 30 100.0 35 .............................. ATGCTTCTAAAGGCGGGACTAACAATCAAATACTA 147500 30 100.0 39 .............................. TTTAATACATATATGCCTTGGCGGGTCTGGAAAACGGCT 147569 30 100.0 36 .............................. AATTTTCGGCTCTGATGGATTTAGCCCCGATGCTCT 147635 30 100.0 37 .............................. TATCGTACACCTTAAAAGGTGTCTTGATAACTTTGAA 147702 30 100.0 37 .............................. AATTCTAAAATCGTATTGGCTAAAAAACTAATATTAC 147769 30 100.0 36 .............................. AAATATGAATTTATAGATAAAATGGAGCAACAAGGC 147835 30 100.0 36 .............................. TGTTTTTAAGTGCCCATGATTTTCCGGTCAGCGGCA 147901 30 100.0 36 .............................. ATCTTCTCGTATACATGATGGATAGCGAAAAAAGAA 147967 30 100.0 36 .............................. GGGAAGAAACCTTACAACTTGTGCTAGAAATGCGAT 148033 30 100.0 38 .............................. GGTAATAGATAAACTGTATGGAGAGCAAAGCGAAATAT 148101 30 100.0 38 .............................. AGCTATTTAATCTGGCAGTTTTATTCGTTACTGGGTCT 148169 30 100.0 35 .............................. GCGAGTATATCATCTCTCATTTCACTTATGGCTTG 148234 30 100.0 37 .............................. ATAGTAGTAACCGGAATAAACTCCTTCCAAAGCTCTC 148301 30 100.0 39 .............................. ACATAATTTATCCGTTTATCTATATCAACTGTAGCCATG 148370 30 100.0 0 .............................. | C [148378] ========== ====== ====== ====== ============================== ======================================= ================== 15 30 100.0 37 GTTTATAGCCTACCTATAAGGAATTGAAAC # Left flank : GCACCATGAAATCAGTGTCTTCCACATATCCTTTTGTGCAACCCCTAGACCCCTCCTCGCTCTTTTTCACCGTTTTTTACAGTTGGGCAGTTTGGTTTGTGACACTATTCGCATGCATTTCAGGCTGGGGCAGGGAGCTTGAAGGAGAAGACGGAGGAAGAGTTAAACACCCATCGGCATGATAAAGGTAAAGGCTTGGTTTTTCACTTTATAAAATATTGAAATATAAAATAAGTAAGAAGCTTAGAAATGTAATTTAATGTATGATATACTTTTATGTGATTATAGTGAGAAAATCGCATAGAAAAAACTCACTTTAAAAAGTCGTCGACCTCCGATAGTGCAAAAACCCCTGGAGGTCGACGACAACCTTAAATTACCCACAAATAAAGAATATAACTGGAAAAGAAGGACTTTTCAATTAAATGTAGAAATTATTAATAGAAAATTGAACAAATTATTTTTCTCGCTTTTTCTTTATTTTTTACCCCAAATTATGG # Right flank : CACTAAGTCTGTTACGTTTCAATGCAATATAAATACGTTGTTTTAATTTCCCCCCCAAGAGCCTTGAAATAGCACCGTATGTAATATTTGATTTGTGGTTTCCTGCGGATGTGCATTATCCTCTATGAGATATTCATGGAGGATTTTTTAAAGCTTAAAAGAAAGTTATGTAAATATAAAATTGAATGAACAATGAAGATTGATAAAAAGTTTATAATATGATATTATATTCTAAGAAGGCAGTATAATCAGATAACATAATCCCATCAGGCTTAAAAATTAAACTCCCCAATTTTAACTTAACTAAGGACAAGAAAATAATTTTATAGGCGTTATGCCTAAATAAAAAAAATAAAAGGAGACGATTGTCTTGAATAAACCTATTGACAAAAATTATCAATTGTTAATTGGAGGTCGATGGGTGGATGCAAAGGATGGGGAGACGTTTGAGACTAACAACCCGGCAAATGGCGAGCTGTTAGCAACTTGTGCCAATGCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 4 237134-241440 **** Predicted by CRISPRDetect 2.4 *** >NC_015519.1 Tepidanaerobacter acetatoxydans Re1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================================== ================== 237134 30 100.0 35 .............................. GATGTTAACTTTATAAACATAAATGCAGACGAACT 237199 30 100.0 39 .............................. CATTTGAGGATCTGGAAGGGCTGACCTTAGCCTCCGGAG 237268 30 100.0 36 .............................. AGAAACGACACGACAAATTATGAAAGAAAGCAATTT 237334 30 100.0 38 .............................. CGGCTAACCGCATTATAATACGTGATGCAAGTGGCCGG 237402 30 100.0 39 .............................. GTTGATGAACATTCCATAGATAGTTTGCAATTTATGTGT 237471 30 100.0 36 .............................. ATTGGAGAAACTTTTAATAGAGCATAAAAGGACTGA 237537 30 100.0 40 .............................. AAAAAAGATATAGTTTTTTAGAAGTCTTGAATGATGAAGG 237607 30 100.0 40 .............................. TTTGATTGAGGATATATTCCTTGCTAATGATATAGCTTTT 237677 30 100.0 36 .............................. CCATAATCAGTAACTATTTCTCTGCTAGCATTTCTT 237743 30 100.0 41 .............................. TATTCCATTTTGTGTTTTGTATAGTTACCAAATCACCAAGC 237814 30 100.0 37 .............................. TTGCTTTGATGAGGTAGCACTATTTTTAGAAGTTGAG 237881 30 100.0 37 .............................. GTCACAATTTGGGCAATACCATGTTTCCATAGGCGTG 237948 30 100.0 36 .............................. AGGCTTGCCCAAAAAGCGGAATATTATTTGTACTTT 238014 30 100.0 36 .............................. TTTGCGGGTAAACAATAAGGCAGAAAACACAATAAC 238080 30 100.0 37 .............................. ATGGTGAAGTTATAGAAGATGATACTAGTAGCACTAA 238147 30 100.0 36 .............................. CATTTATTGCAAACTATGCACTTTCCTTTGCTTCAA 238213 30 100.0 38 .............................. AACTCTTCTAAAAAATCATTAAAACTAACTTTTTTTAC 238281 30 100.0 36 .............................. TTGTAATAACAATATAATGATGCAAATAAATAAAGC 238347 30 100.0 36 .............................. ATGAAGAAGCAGAGATTGACAAGCCAAGCTATGCAA 238413 30 100.0 36 .............................. TACCTTGGAACTGTTCGCTCATGATTATAATAATTC 238479 30 100.0 37 .............................. TAAGACTCAATCCAACTTTCCAAAAATTCACGCAAAG 238546 30 100.0 39 .............................. TGAAACCCTTTCTTCATTTTTGGCCAATGAGCTTCTAGC 238615 30 100.0 37 .............................. GTCGAAGAGGAGGTGGCGAATTGACGAGGGAAGAGCT 238682 30 100.0 39 .............................. GCAGCAAGTTTTGCGGCACCACTTTTGGCGATATTGAAT 238751 30 100.0 40 .............................. TGCCTATCCACTGTGGAAATGGCTGCTCTTCGGGCATTTC 238821 30 100.0 37 .............................. TGGAATATATGGTCCGGTATATGTTGATCTGTAGGAA 238888 30 100.0 38 .............................. CAGGACTATATTGGAAATATTCAAAGATGCACTTATTG 238956 30 100.0 38 .............................. TGATGTAATCATTGATTTCTTTAGGATTAAAACCACAT 239024 30 100.0 35 .............................. TCGGGTCATCAGACTGATCATCCAGTGTTGCCACC 239089 30 100.0 40 .............................. CACTAATGTTGGATGAATCATCACAGATACAAAATGAAAC 239159 30 100.0 41 .............................. ATAACAAGATTGAATTCAGTCAAAAGGAAATGGATAAGGCA 239230 30 100.0 36 .............................. TGAAGCTTGATGACATGAAGAATATCCTTAAAACCC 239296 30 100.0 36 .............................. ACTGGTACATGGCCGCAGTCTGTTCCTGTATGCTGG 239362 30 100.0 40 .............................. TGGACTACCAGACACAAAGAGATCGCGCCGATAAGGCCGA 239432 30 100.0 39 .............................. TTGTAAACACGCCCATCTCTAGTGACAGTATATGTCTTT 239501 30 100.0 36 .............................. TGGAGGTGTTGTAAATGGCATACAAAGGCCAACCCG 239567 30 100.0 37 .............................. CTTTGCACGAGTATGAAAACAGCCTCATCTTGCTCCC 239634 30 100.0 41 .............................. CAGAATACTACCTCTCCTTGCCAATCTTGTTTTAAACCATC 239705 30 100.0 35 .............................. CATGGGGAGTGCTGGGCAAGACTTCGTAGACGAAG 239770 30 100.0 38 .............................. GTTGATAATTGTATTTTTAATTTACTGTTTATCCTTGT 239838 30 100.0 36 .............................. ACGACAGACAGGATATAGAGGATTTGGTTACACGTG 239904 30 100.0 36 .............................. CTGAAAGTAGGAAGCCGACCGGCATAAACAAAGCCA 239970 30 100.0 37 .............................. AGGATAAAAGATAACTGGCAAGTGTTTCCTAGCAGGG 240037 30 100.0 38 .............................. CTATCTCCTGGTCGCCTTCAGCCAAGGCGAACATCCTT 240105 30 100.0 39 .............................. AGACATGGCATTGATTTCTTGGGATTCAGGACCTTTATG 240174 30 100.0 126 .............................. TGGACGACACTATCCCGGAGGAAAGAGAGACAGGCATGGCCATGGGCAAGGAGATGTTAAAAAGGTGCGATGAGCTCTGGGTATTCGGAGAGGTTATAAGCGAGGGAATGGCCTCCGAGATAGAAC 240330 30 100.0 38 .............................. TTATAAATGGGGTGAAATTATGGATCTTACGACAATTA 240398 30 100.0 36 .............................. CCAGCCTTGGCACCAGCTCTATTGGTATATATCCGG 240464 30 100.0 36 .............................. TGAATTGTCCTTGGATGACATCCCGCCATATTTGCC 240530 30 100.0 37 .............................. CCAGCCTTGGCACCAGCTCTATTGGTATATATCCGGC 240597 30 100.0 37 .............................. ATAATCTCATATTCTTTTTTCATAGTCTTCGTTCACC 240664 30 100.0 39 .............................. ACGACTATCCCGGGAGAACACCCGAGACTGCCCAATTTT 240733 30 100.0 42 .............................. ACCAGAGCAGGCGCGAAACCCGTAGTTGCTGTTGGCATTGCC 240805 30 100.0 37 .............................. TCGGCTGTCCTGGCTCGGGAATGAATTGAGAAGTGAC 240872 30 100.0 37 .............................. TATGCCTACAAAGTCTTTTTATCAAGTGCTATCCGCA 240939 30 100.0 39 .............................. TCAAAAGAGGAGAGAATATCAAGAACTGGCAAGGGATTC 241008 30 100.0 38 .............................. TCTACTTTGTCCCAGTCAATACATGCCCATATTTCATA 241076 30 100.0 38 .............................. ATAAACTTGTCAACCGATTCGCTAATAATACCTTCCAC 241144 30 100.0 36 .............................. GGCTCTAATGCCCTAAATTGGTCTAACCCGTTCTTT 241210 30 96.7 35 .....................G........ TCACAATCTTTTTTTGCGCAATCACTCTTGTCTGG 241275 30 96.7 39 .....................G........ GCCCTTGAATTCACTTTTGATAATGAATATATCAAAGAA 241344 30 96.7 36 .....................G........ GCTTTTCTTCTTTTGTCTTTATCTTTCTCTATCCCA 241410 30 86.7 0 .C.....A..............C......T | G [241429] ========== ====== ====== ====== ============================== ============================================================================================================================== ================== 63 30 99.6 39 GTTTATAGCCTACCTATAAGGAATTGAAAC # Left flank : CAGTCATGTCTTTGGGCGAAAAAAGACCCGCAACCTTTGCCATAATTTTTAGCTCAACTCCTTTTTTAAAGCATTTTCACAACTCGTAATAAATGTTATTACAATAGCTTACCTTCATTAAAAACAAGTTTATACCTGTAAATACATTAAATCAAAAAAAGGATTTTTTGCATTTAGCTTAAAGGGATTTAAGAAATTTTATTTTAATGAGAAACTGAACATTTATTGGAGGGGTTAAATATTAGAAGGTATTTTGATACTATTAAATTAGATTATATCATTATTTGGGATAAAATGATATTTTTTGACACTCATTTAATTTTGTCGTCGACCTCAAGTCGCGCAAAAACCCCTGGGGATCGACGACAACCAAAAATTACCTCCAAATAAAGAATATAACTGGAAAAGGAGGACTTTTTGATTTAATGTAGAAATTATTAATAGAAAATTGAACAAATTATTTTTCTCGCTCTTTCTTTATTTTTTACCCCAAATTACGG # Right flank : TAACACCGTATACAATATATTTGGTTTTTGATTTCCTAATGATGTGTATAATAGAAAATATGCGTTATTGTGTGGAAAAGTGGGCGGTCGATGACCGCCTCTACGTATTGGTAATTCATTATATATTGTAGGGAGGTTGCTGCAAGGTCTTCCAGTTTATACCATGCAAGATTGGTAATTTATTATATATTGTAGTGAGATCCTACTTTAATAAATCATTTATTGTAGGTAAGTCATTTGTTGTAGTGAAGGTTATACGTTGATAAATCATTTGTTGTAGGTAAGTTATATGTTAATAAATCATATATCATAGAGTAGGGGAGACCATTGGTCTCCCGCTTATATTGCACGTTATACACGTTATTGCCATTGAACTTTAACTGTGATTTTACGGCAAAACTGACTTTTTACGATAAATCATGATAGATTCCACTGTAGAAAGATAATTTCGAGCTAGAAATGCCGAAATATTGTTCCTGATTATAATAAGATACGCCATA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //