Array 1 1282178-1283647 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHIB01000001.1 Legionella maceachernii strain NCTC11982, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1282178 28 100.0 32 ............................ GGTAGCATTAGAACGAAAACGACCAGTAATAA 1282238 28 100.0 32 ............................ AATAAGCGAGGGGATAGCTGAGCCAAGCGACG 1282298 28 100.0 32 ............................ AACTTTCCACTTGATGTAATGGGGCGGACTGA 1282358 28 100.0 32 ............................ GGTTAGTCTGCCAGGAGACATCATTAACAGGA 1282418 28 100.0 32 ............................ GACTGGGTTAGTCTGCCAGGAAACATCATTAA 1282478 28 100.0 32 ............................ TGTATCGCTCGGATATTCTTGAGCAGTTATGG 1282538 28 100.0 32 ............................ GAAAGAATATCAAAAGATTCTAAAAAAACAAC 1282598 28 100.0 33 ............................ CCTGGCCTCAGAAGGGTCCTGCTGTAGAGTTAC 1282659 28 100.0 32 ............................ TATGGAGCGTGTTAAAGCTGTTGTTGATGAGC 1282719 28 100.0 32 ............................ TTGACGAGAAAATTACAACAAAGCTCCTCGAA 1282779 28 100.0 32 ............................ AATGCGGATTTTCCGCGCATAAATCCCCTAAT 1282839 28 100.0 32 ............................ TAAAAAATACGGTGATATTAAAGTTGATGATG 1282899 28 100.0 32 ............................ TTGACGAGAAAATTACAACAAAGCTCCTCGAA 1282959 28 100.0 32 ............................ CAACAAAATCAAGAGCTAAACCTAAGCTTTTA 1283019 28 100.0 32 ............................ TGATGATTCGACTGATTATATTGTTCCGCAGA 1283079 28 100.0 32 ............................ TTTACATCTCCTCTTGGTTTTAAGTGCGTATC 1283139 28 100.0 32 ............................ AAATACATTTTTAATTTCAAATGCTATGATTA 1283199 28 100.0 32 ............................ ATCAGACAAAGAATATGAGCATATATTTTCGG 1283259 28 100.0 32 ............................ GGCATGATTCGTGCACATGATTTTTCTCGTTC 1283319 28 100.0 32 ............................ AGGATCATTATCAAACTTTGCGCGAACCTTAG 1283379 28 100.0 32 ............................ AAAAAACTAAGGAAGCCTTTATGATTAACGCA 1283439 28 100.0 32 ............................ AAGCTTGCAGGGGATAATAACAGGTCATATAA 1283499 28 100.0 32 ............................ TGCTAAAGTTAGGGCAAAATTTGATAATGATC 1283559 28 100.0 32 ............................ ATGCTTGTCTTTTAGATGTCTTGCTAAAAGCC 1283619 28 92.9 0 .................T......C... | A [1283642] ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGTGCTAGAAAATTTTAATGCGAAAAAATGGCTAAATTTTTTGTCTGATTACACGCACATCACTAGTATCCGGGAGGTGCCACAAAATATATGCTCCTATGTTCGTTTTAAAAGAAAGCAGTCTAAGTCAAATTTGGAACGATTGGCAAGGAGAAAAGCGAAGTACGAAGCCATTAGTTTTGACCAAGCATTAGAATTACTTAAAAATCGAAAAGAGCAATTAATAAATGCGCCTTATATCAATATATCGAGCAATAGTTCGGGAGAGAGCTTCAAAATTTTCATTATAAAAGAAGTTGCTCATGAGCTGATAAACAATGGTTTTAGTTGTTACGGTTTAAGCGCTACGTCAACATTACCGAATTTTTAGCCTTTATTTTTGCTGCTCTTTAAAAATATAATAAAATCAATAGGTTAGGAAAGGCATGATTTTCATTGGTAATTCTGGGTATTTTTAGCTAAGTATATTAAGAATATCGAATATTTTTAATATAATCTGG # Right flank : ACTAATCTTCAAAATTTTCCTTCTTAGCTTCATGGCCGTTAATGGCAATATTAGCGATACAGCCCAATCAATTCAGTATGAGGATTGCTGCTTTTGAGGCAATGGTATTATCTTCACTAATCAATGTGCTTGATGTTGTTCTAGAGATTGTGAAGTAGGGTAAAGACAGGTGGTTCGTAAAGGTTTTTTCGAGCATCTTGTCTAACTCATGATTAATTCCTGATGAGGTCATGATCATAAAGCGTGATTTTTTGAATTTTATATGGGAAGGCATTGTTTTTTTAGTGATTTTCCATGATTAAACGTAAATGATTGCATTTCGCATTTTTGTTTGAAATCTAGTGAATTGCAAATTACTCTCTCTTAAGAAAAATAATTGGTTGACTAGTTGATATGAATAACACTGATCTTAGGCGCGGCAAGTTAATGGCTCGTTAGCTTTTATAAGTTCGTATTTATTTGTAACGAATATTAAGTGAATCAGCAAAAAGAGTTTTGAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //