Array 1 108571-104670 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIH01000015.1 Paracoccus sp. DK398 Scaffold15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 108570 31 100.0 35 ............................... CTGATCGCATCAGGAACAGACCGCTTGACGTATCC 108504 31 100.0 33 ............................... ATTTGGATGCTGGGCTTTATAGCCATTGCGTCC 108440 31 100.0 36 ............................... AATGGTCCGCCAGCGCCTTCTACGTCGATCACTGAC 108373 31 100.0 35 ............................... CGGTTGCTCCGTCGATCACGAGTGCCGCGGCGATT 108307 31 100.0 34 ............................... TCCATGGTCTCGAATGCGAGCGACGATTACGCCG 108242 31 100.0 33 ............................... GCTCATATGATGTTCCGATTATGTTGATGTTTC 108178 31 100.0 34 ............................... TACCGGTCGTTGGGCGGCGAACAAGCGGATGCTG 108113 31 100.0 35 ............................... CCGGTTGGCGCGCCATCAGATCGCCGCCAGCCCAC 108047 31 100.0 33 ............................... CCTTATATCATCGACATGGCCGGATCGGCGCTT 107983 31 100.0 35 ............................... ACTCAAGACATCGGCTATGAGAAGTTCGCCGACAG 107917 31 100.0 35 ............................... CAAGCATGGTGCGCCGAACAAGTCTTGCCGATCTT 107851 31 100.0 35 ............................... GCCTCCAAACTTGCCGTCGATCCCACTGGTCACAT 107785 31 100.0 33 ............................... TCCAAGAGTTTTGCCCACGTCGCGGGGCCTGCG 107721 31 100.0 34 ............................... ACCGAGCGCGGCGAAGCGGCGCGCCAGCTTGATC 107656 31 100.0 35 ............................... CTCGAAATCGAAGCCGGATCGTCGGGCAAGCCGAA 107590 31 100.0 34 ............................... CCGTAATCTCTTGGACTGAACCGTCCCATTTGAT 107525 31 100.0 35 ............................... GGCTTGGACCAAGCCCGGAAGATGACGACGCAGAC 107459 31 100.0 34 ............................... GCATTCGGATCTCTCGATTTCATCGCCGGTCAGA 107394 31 100.0 34 ............................... GGAGGATCAGCGAGCATGAATGACCATATTGACG 107329 31 100.0 32 ............................... CTCGGCGATCGCGAGGCCGACCAGCGCATCAG 107266 31 100.0 35 ............................... CCGAGATCCTGCGCGATGTTGACGGTCACGCTCTG 107200 31 100.0 34 ............................... TCGGGGATCTGCACCGGAAAGGTCACCAGCATGA 107135 31 100.0 36 ............................... GGCAAAACCAGCCGCCAGTTGTTGCGGTCCCGCCAG 107068 31 100.0 35 ............................... TTCCCGGTCAGGGACTCGATCTTGGCTGTCGCCGC 107002 31 100.0 33 ............................... TTGGCCAGCACATGCTCGGGATAGGCGACGTAA 106938 31 100.0 35 ............................... TTAAAAGCGGGCCGCTGCATTACTCGGCCTCGCCC 106872 31 100.0 34 ............................... CGCGCACTCGCAGGAGAACGGGGATGAGCGACAA 106807 31 100.0 35 ............................... AGACCATCCCAGGCACGGGTCATATCGCCGGTGAA 106741 31 100.0 35 ............................... ACTTGATCGCGCCGGATGGTCATTTCTCCGGGCAG 106675 31 100.0 34 ............................... TGCCTAGCCCCAGTCACCCCAATGGGAGTGACCT 106610 31 100.0 33 ............................... AAGTCAAGCATCTTGAAGAGATAGGTGGAGATA 106546 31 100.0 36 ............................... TCGTCTGCAGACAGCGAGCGATTGCCCCACAAACGA 106479 31 100.0 34 ............................... CAGCCCACCACGCCGTCGAAATACTTCACCATGT 106414 31 100.0 34 ............................... CGGGCCATAGACCCGGACCGCGCCAAGCAGCGCC 106349 31 100.0 35 ............................... AGCGGCAGCCCGACGCCCGCAGTCACGCGCACGCT 106283 31 100.0 36 ............................... TCCATGTTGCCCAAGAGGGATTTGGCCCACCCGGTC 106216 31 100.0 35 ............................... CCACCATCGCCACCGCCGAATGAGCCGTCGAGCTT 106150 31 100.0 35 ............................... GCTCAATTTCCAGCGGTCGCGCTCAGCGTCGCGCT 106084 31 100.0 34 ............................... GCTCTACCGGCAGGTAGATGAGGCCGGGGTCCAG 106019 31 100.0 35 ............................... TCGAGGTCGACGCTGATCGAACCGGCCTTGCCGAA 105953 31 100.0 34 ............................... TCATGAATACACCGCTTGAGCCGTCTCTGGCCAG 105888 31 100.0 34 ............................... GCTCAGGCCGGAGTGCTGGCGGAACACGTCGCTG 105823 31 100.0 35 ............................... CAGACTCCCTATGGCCTCTGGTGCCTCAAGAAGGG 105757 31 100.0 36 ............................... TCCCCGGTCACGCGCTTCAGCGTGGCGGCACGTCAA 105690 31 100.0 35 ............................... TCGCCCATCAGATCGCCGAAGGACCGAAGCGCGCC 105624 31 100.0 35 ............................... TTTTCGTTCTTGGTGACATTGTTGCGGGTCATCAG 105558 31 100.0 33 ............................... GGACCATAAGCGCGCGCATACACATAGGGCGTC 105494 31 100.0 34 ............................... GAGACCCTTTGCGCCAAGTCGCGCGTTAGCGCAG 105429 31 100.0 35 ............................... CAGCTGATCATGGCAGATCCGCCGTGGCAGTTCGC 105363 31 96.8 35 .....G......................... CGTCCCACCTGCGGGATGGCGACGTGCGCGAAGAC 105297 31 96.8 35 .....G......................... TTCCAAATGCGAAGCTGGTTGGCATCCTTCCCGTG 105231 31 96.8 35 .....G......................... CGTGTGCGGCTTGATGTGTTCGCGAACGCCAAGAC 105165 31 96.8 35 .....G......................... GGCGATGCCTCGCGAAGCCGCCGATAGAACGCCAG 105099 31 96.8 36 .....G......................... TCATGCACGGCCCCACAGGCGGTGCGGGGCAGACGG 105032 31 96.8 37 ...........................G... ATGGACCCGTTGACGCGCTAATAGCCGACAAGGGCAA 104964 31 100.0 36 ............................... GAACCAGACCCAATATAACAACTGGGAGAAAGGGTC 104897 31 100.0 35 ............................... CAGCTGGCGCTGTCCGGAGACAGCACGCACCTCTC 104831 31 100.0 36 ............................... TTGGTTTTCATCAGCGCCTTGGTCTGCCCGTAGACG 104764 31 100.0 34 ............................... GGCAAAACGCTGGAGGAAGATACCGGTCGTTATA 104699 30 87.1 0 ........C........C.T.....-..... | ========== ====== ====== ====== =============================== ===================================== ================== 60 31 99.5 35 GTCGCCCCTTCACGGGGGCGTGGATCGAAAC # Left flank : CCGCCCTGGTTCTGGAGTTGAGATGCTTGTGCTGGTCACCTATGATGTGAACACGCTGGACGTGGGCGGCAAGAAGCGATTGCGCCAGGTCGCGCGGGCGTGCGAGGATTACGGTCAGCGGGTGCAGTTCTCGGTCTTCGAGATCGAGGTGGATCCGGCGCAATGGACCCGCCTGAAGGCGCGCTTTGAGGGGATCATCCGCGCAGAGGTCGACAGCCTTCGCTATTACTACCTCGGCTCCAACTGGTCGCGCCGGGTCGAGCATGTCGGGGCAAAGCCTGCGGTCGACCTGAATGGCCCGCTGATCCTGTGATTTTCCTGTCCCTGCGAACCTGAAGCGTGTCAACATCACCCGCGAGGTTCGCATTCCTATTGTTTTTTGAAATCGTTGGCTTTTGTCTTTATTGCGGATTGAGCGCTTTGGCCCGAACCCAAACCTCGCTCTGTTCGCATTGCTTGCGAAGATTTTACTATTAAAGCAGTGCGATATAGTAGAGGCC # Right flank : CTTTCGGCGATTGGCCTCAATGACGTCAACAAAATGGCTGATATCGAAGCTGTTGGCAGTGATCCGACAAAACATAGCTGATGGCGGCCCACCGTCTCTGTTGGCAATTAAAGGTTTCATGGCTGCCAATCGCAAGATCAGGGTCATCATATCAAAGACATTTTGCGCATATATCCCTTAGGTGACGGGCGGGGGCACCTCAGCCAGCTCACGCGCGGGATCAAAGGCCAGCAAACGCAACGCATTCAGCGTCACCAGCACCGTGGCGCCGGTATCGGCCAGAATGGCGATCCACAGCCCGGTGATCCCCAGAACCGAGGTGACCAGAAACACCGCCTTCAGCCCCAATGCCAGCGTGACGTTCTGGCGGATATTGCCCATCGTGGCGCGCGACAGCCGGATCAGCGCCGGCACGTCGGTCACGCGGTCGCGCAGGATCGCGGCATCGGCGGTTTCCAGCGCGACATCCGTGCCCGAGCCCATCGCCACGCCGACCCCCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTTCACGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //