Array 1 1063439-1062869 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN868538.1 Anaeromassilibacillus senegalensis strain mt9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1063438 33 100.0 34 ................................. CGTAACATAGCGCGGATGCACCTTATTCCCCGGC 1063371 33 100.0 34 ................................. CAGGCGAGCGAGTCTCCACCATAATACAATCAAG 1063304 33 100.0 33 ................................. CAACGACCTGTATATGTCGTTGGAGCTTTGCGA 1063238 33 97.0 33 ...........C..................... GTCAATGAGGATAAGGGCACTCATGTTATTGCC 1063172 33 93.9 33 ....A......C..................... CGGGCGCGGAATAAATAGCGGTCAAGAGCTTAC 1063106 33 97.0 35 ...........C..................... CCAGCAGGGGACGGTACACACCCGAACGAGATCGG 1063038 33 97.0 35 ...........C..................... ATTCTAACGCCATTTGCATATAACAAACTGGCGCA 1062970 33 100.0 35 ................................. CATACCGATCAGCTCGGCCATCTCTTGTTCTTTTG 1062902 33 84.8 0 ...........C...........AA..GA.... | T [1062881] ========== ====== ====== ====== ================================= =================================== ================== 9 33 96.6 34 GTCAGTGCCCGTAGGGGCACTGTGGATTGAAAT # Left flank : CTGGGCCGTTGGTACACCGGGCCAGAGCACCGGCGTGTATACCACAATGGCGGGTGAAGCACCGCAGCAGCACTGTGTGGTTACAATTGACTGATTGCTGCCACTGAAAAGCACCGTAGGTGTGATGGACGTTGCACGTCCGCCGCAGCATTGTGTGGTAATGGTTGGCTGGGAATCCATCAGAAGATCTGTCGAGAAAACCGTGATTATAGGTTTTCTGGTATTTGTAAAATTTGTATGATTATTAAAGAAGGAGGGCGCTTATCGTAAGCGTCCTCCTTCTTATCTTTACCTAATATGTAAATGAAAGCAGCGAAAGTGCGAACCGGAAGCAAACATGAAAAGCCTGGAGGATTCGCACTGAAAAAGAAATGTTATATTTCTTCTATGGGTTACATCTATAGTAAAGTTAGGGTATGATAAAAATGAAAATTGGCAAATAAGCAAATTTTTTGTGAAAGTTGTATCAGACACAAGTATGCTGCTTGGCAACTTTTGCT # Right flank : GGATTGAGTGCCTGTGCGGAGATGGCGAGACAGAGGCCCGTGTCCGTGGGCACTGAGACGTATAGCCGGCTTCCAATGTGTTTTTGGAAGCCGGTTTGTGCTGTCCGTGCAAATTTGTAAGAAACTTTTGAAAAGGATGGAAAAGCCTTTGCGTTTACGATGGAAATGTAGTATGATTTTGTAGAAAAACGCGCAATTTTTTGGGTGCGGCATCCCCAGCGTTGGGAAGGGAAGAAAGGGAATGGAAGAAAACGAATCCAGTGAGTGGTACGGATTTATAGAAATCATGCGCGTAATCGGCGCGCTGGGCGTGGTGGTCATTCACGTCTATTTCAGTGTAATCGGAAATTTTCCGGATATCCGGCCATTGGCAAAGCAGGCGTTTAATACGGTATTTATGTTAATGAACTATGCCGTTCCGCTGTTTATCATGATTTCCGGCGCGCTGTTTTTAAACAGCGGCAAAACCTATACCTATAAGACCATCTGGAAAAATATCC # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:0, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGTGCCCGTAGGGGCACTGTGGATTGAAAT # Alternate repeat : GTCAGTGCCCGCAGGGGCACTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 1 380913-381475 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN868535.1 Anaeromassilibacillus senegalensis strain mt9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 380913 32 100.0 33 ................................ TATTTGGACAGCTAGGTGGAGCTTCATCTACGA 380978 32 100.0 34 ................................ TATTTGATGAAACCCTTTATCTTAAAAACATAAG 381044 32 100.0 34 ................................ TCTGGAAATAAAATCATCGCGCTCAGAAACCGGC 381110 32 100.0 35 ................................ GGGAGAAACGAAAAACCCGACAGGGAAAACCGCAA 381177 32 100.0 36 ................................ GAGCTGCTTGCAAAAGGCCACGATGGGGTACGCCTC 381245 32 100.0 34 ................................ ATGCTCCGCCAGACGTCCCACGGGACGCGGTAGA 381311 32 93.8 35 ............T........T.......... AGTTGAGAAAAGATGTACTACACGATATAATTTAA 381378 32 84.4 35 ...............G.....T.AG......C ACCAGCTTCAAAATGTCCTTTTCCGAGCGGATATA 381445 31 87.5 0 .......-....T..G...............A | ========== ====== ====== ====== ================================ ==================================== ================== 9 32 96.2 35 GTCAGGCTCCATGCGAGCCTGCGGATTGAAAT # Left flank : CGCGATGCCAAACTTCACTGTGGGCAACGGCAGTGTGCTCAAGACCCAGTATGTCACCAAGATTGGCAACGACTACTATTACAGAGTCTGGGCGATTGGCGCACCCGGTCAGAGCACCGGCGTGTATACGACCATGCAGGGTGAGAACGCACAGCAGCACTGTGTGGTAACCATCGGTTAACAATCCATCCGGTTTTCTAACCAGAAAACCGCGATCCCAGATTTTCCCGCGCTTACAAAACCCGTATGATTACAGGAGAAGGCCGCTTGCAACAAGCGGCCTTCTTTGTATCCATCCGGTGTTCTGCGGAATGCGGCAGTGCGAATATCAAGCACACATAAAATATTTGGGGGATTCGCACCTGAAAAAGCAAATTTTATTTCCAGTAACGTTGCGTTTTCAGCAGGAATCAAATAGAATAAGACTAAAGTCACATCAAGTTCTGATTTCTTTGTAAACGTCGCACTATACGAAAGGAAATTTTTGGGTGACTTTTGCT # Right flank : AACGATTCGGATTCTGGCGGCAACGCCTTTTTCCACCTTGCAATCTCCGCATTCATGGGGAGATTGCAAAACACGTCAGTTCATCAAAAAAGCAGAGAGCCTCCCGCGGCAAATCCGGCCGCGGGAGGCTCTCTGCTTTTATAAAATGATCTGGATTTCTTTGTAAACCGACGGTGACCACACAGTGCCGCCGCAGCGCTTCGCCGGGGACCTGCGGTCAGCACGCGGACGCGCAACGTCCATCACACCTACGGTGCTTTTCAGTGGAAGCCTCTTTCAAACCAGGGTATTTCCAAGCTCTGTTCGCCAAGAGGCGATTCTCTTAATTGGTTTAAACGAATCTCTTAGCCAACAGTCACTACACAGTGCTTCTGGGAAGGTTCGCCTGCCATTGTGGTATACACGCCGGTGCTCTGGCCGGGTATTCCAATCGCCCAGACCCTGTAATAATAATTGCTACCGATCTTCGCCACAAACTGCGTTTTGAAAACAGAGCCGTT # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:0, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGCTCCATGCGAGCCTGCGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 1 507649-507418 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN868536.1 Anaeromassilibacillus senegalensis strain mt9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 507648 32 90.6 35 .....G.T...T.................... CTCTGCACCTAACATTTTAACGATTCAAACGCTCC 507581 32 100.0 33 ................................ AAAAATCCACCGTGCTTCCTCCTTTGCCAACTC 507516 32 100.0 35 ................................ CCACCATCCCGGACGGCAAGCGCATCTACACGATA 507449 32 96.9 0 .....................T.......... | ========== ====== ====== ====== ================================ =================================== ================== 4 32 96.9 35 ATTTCAACCCACAGCGTCGCACGGACGCTGAC # Left flank : CATTTGAATACGTCTGCTCGCTGCTGCAACAGGTGCTCTTTGGTACCGTCTCCTGGGAGTACAGTGACTCCCCGCTGAATATACACGGGCGGACCAATGTTTTTTATTCCGTATGCTGGGGCATTTTAGGGCTGATATTCTTGACGCATACCCTTCCCTTCCTGACCAACCTGATTGAAAAAATTCCAAACCGGCCGGGAAAAGCAATCGCGTGGGTGCTGATCGCCTTTATGATTTTCGACATTGTGATTTCCGCCGCGGCTGTGCGCCGGCAAACCAACCGCCATTTGGGGATACCCGCCAGCAATCCGGTCTCCGCTTTTCTGGATGAACACTATACGGACGACTATTTAAAAAAGGTCTATCCCAATATGCAGCTGGCCGGATAGATGATAGGACCCCCGCTCTGTTGTGTAAGAACATATGGAGCGGGGGTTCTCTATGTTGTGGCGTCAATGAGTATACTGGCCTGACACCATGGGGTAAACTACGTCAGGCCG # Right flank : AGCAAAATACACCAAATACAAACTGCAAAAACTTGTACAACTCTTGCAAAAATGTATTTTTATATATTTTATCTTATCTTAATCCATGTGAAAATGCAACTTTAATGATAGCGGAAAACGCTGTTTCCAAGTGCGAATCTCCTGGGAATTTTGTGTACGCTTTCGATTCGCACTGTCTCTTCGTATCCAAGTTTGATTCAGGAAACACAAAGAAAAGTCTGTTGTAGTATCCGATATATAATAGACTACTTAAAGCAAACCATTTAAAATGGGAAAGCAACGCTCTTAGACAAGCATTTCTTCCGGTCATAAACGCTGTTTTCGTACATTCTTTTTAAACAGACATTCTGCAATCTTCTGGGACGCCGCGCAATCTCACTTGGTCTATGCACCAACAACGTCCGCATTTTCAAGGTGCCGCTCCCGCAAATCCGAACAGGCCCTGTGTTATCCCTGTCGTATCAATGAGCATGCCCGCATGGTGTGAAAACCGCGATCAA # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAACCCACAGCGTCGCACGGACGCTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 1 24668-25236 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN868537.1 Anaeromassilibacillus senegalensis strain mt9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 24668 33 100.0 34 ................................. TCCCCTATAATGTGGATGTATTTATTGTTCTTTG 24735 33 100.0 34 ................................. CCAAATTTAGAAGGTTGAAGTGGTGACGTGAAGA 24802 33 100.0 35 ................................. GGTCTTTGGCTTTATCCCAATTATTCAGGCCACGG 24870 33 100.0 33 ................................. GATTATGTACCTGCTTAGTAGGTCCATCTCGAT 24936 33 100.0 35 ................................. TCATTATCTGAACAATGAATATGTTGCACGGCAGG 25004 33 100.0 34 ................................. GTATCCGTTTTAGAGCTTGTGATAGGTCCATATT 25071 33 97.0 33 ..............................T.. TATAAGCGCAAGCGTGAACACCTGCAAAACTGA 25137 33 100.0 34 ................................. GTAGTGGCCGATGATTTTTACCCTATGATCGTGC 25204 33 84.8 0 ...............G.............AATA | ========== ====== ====== ====== ================================= =================================== ================== 9 33 98.0 34 GAATTGACCTACGTAAAGCACGCAGAGGTTCGG # Left flank : AAATGGGAATTTAAGGCCAGTCAATATGATCATTTGAGCAAAACATATAATAAAAAGAGTTTAAGTAAAAGAATTCATTGTTTAGAGAATGGAGATGTACTCCAGAGAGATTTATACTCAGCGTTTCTTATTATGAATGCATCGGAAGATTTGAAGTCACCAGATTCCGAAAGGTGTGAACGTACTTATACTAATTTTAAAGTAATGCATGACAACTATATAGAAATGTTGGCAAAATCAAATATTCATACTCTTTCCAGCATGGGAATCAATCAAATAACCAACGGTGCGAATGTCCAGTGAACATGAAAATGTAGGAGGATTCGCACCTAATATATGGGCTTTGAACCGGCCCACGCTGTCGATAACAGGTGCAAAGGTGTCTGCGGCAGTAAATTGTTTGGGGAAAACAGTCAGTGCTGTGTCCTGTTGAGACACAGAGAAGCTGTTGTACGTAAACACTGCATAGTTCTTGCTGGTTAGTTTTGTGTGTTTTTGCC # Right flank : ATTTCAATCGAATACATAGACAAAAAATATAACCGATAGGCCGCTATAGCCTATCGGTTATATTTTTTATCTCGGTGCGACACTTTGCGCCATGTCGATCATTGTTTCAGCACTCAGATCTCCTCCAATACTGAATATGATACCGTCAGCCTGCCACATCAGTTCGCATGGGTATTTCGGATCCGGTACATCATCGGCGTAGTAATATGTTTGCCCGTCGACAATGATCGGTGATTCGAGCGTGGATTCATCAACAGATCCGCTGCGCTGTTTGAAAATCATGCGCTTTGTCTGAGATCGGTATTCTATCTCAAACGCCTCCCCAGGCTCTCGATTTAATGGACCATACAGGGTAGGCATATATCCATGAGGGAGTTCGTACGGGACGTAAATGTCCCCAACGGTCATAGATCGTATGAACATCTCGTTTTTATCTATATCAGAAAAGATCGGTTCTTGTACGTCCGAGATGCTGAAATACAGGCCGTCATAATATTTGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTGACCTACGTAAAGCACGCAGAGGTTCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 122131-122563 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN868537.1 Anaeromassilibacillus senegalensis strain mt9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 122131 31 93.9 35 .......-....-.................... CAAAACGAAAGCGGGAAAAAACAGAGTGGTCCCCG T [122136] 122198 31 93.9 33 .......-....-.................... CATTTTTTCACTTACTTTGGCAGCCTTTGTAGC T [122203] 122263 33 97.0 34 .........................A....... TGCCGGTACAGCTCTATCTGATCTTTGATGGCGT 122330 33 100.0 35 ................................. CACCACGTCCGCAACACGCTGGTTGAGCAAATCCG 122398 33 100.0 34 ................................. ACGGCGGCTTATGTGGACGCCTTTTATCGCATGG 122465 33 97.0 33 .........................A....... AAGATGCTATAAGGTTGGCGGACGCAAACGGAG 122531 32 78.8 0 ...........T.-C.A........A.C....G | C [122561] ========== ====== ====== ====== ================================= =================================== ================== 7 33 94.4 34 GTCAGGCTCCGCGAGGGGCCTGTGGGTTGAAAT # Left flank : GGCTGTACAAACGCCCCTATTTCCGCCCGGGCTGGGATTACAACGGCGCGGGCTGGGATATAAAAGCGCAACTGGAACAGGAATACGGGCGGCACTACGAGGGCAACACGCTGATGTACCTGCATCGCAGTGGGGTACAAATCGCCCTGCGGCTGTATGAGGCAAGCCCGGCGCTCCGCGATGAGGTCATGGCACTGATGGAGCCGACGAAAGCTCCGGCGTTGAATGCGAACCCCAAGCAAACATACCAATTGGACATGCCGTATGGTGAGATCAGCCTGACCGCTGGCAACATGGCGCTGAGTATTCGGATTTAGGGCGAGCCCCAAGCAAACATGAAAATCCCGGAGGATTCGCACCTGAAAAAGAGATATTATATTTCTTCTATGGGTTGCATCTATAGCAAAGTTAGGGTATGATAAAAATGGAAATTTGCTTATTTGCTAATTTTCTGTGAAAGTTGTATCAGACACAAGTATGCTGTTTGGTGACTTTTGCTG # Right flank : GAACCGCACCCTGTATGGGGCGCGGTTTTCTTGCGCCCGATGATTGCAACTTCTCCCTTTTTGTGGTAATGTTTATTGCAAGGGGGAAGAATTATGAAATGTATGGTTTGCGGTAGAGAAATAGAGGATGGTGCATTATGCTGCGATCAGTGCAAGGAGAAAATGGCGGGTTGCGCTGAGCCAGAGCGCGCGGAAGACGGTCAAGCGGCGGCAGAATCGGGCGCGGCCCAAAGCAGAGACATAGCGGTAACCAAGAAAAAAAGCAAGAAATGGCTGCTGGTTGCGATTCCGCTGTTACTATTGGTGTTCATCATAGGAGGAATTTGGGTTGTAAAAAATATAGACGATCCAAATGCTAAGTTTGTTACGGGAAGCGACGGGCGTAGTATTTTTAACTTGCCTTCCGACGAGTTTATGAAAAAAATACTGTTATCCGAAATAAAGGACAACATATTGTCTGTTGATGAAGTCGATCGATATGCCCTGATAAAAACAAGCGC # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGCTCCGCGAGGGGCCTGTGGGTTGAAAT # Alternate repeat : GTCAGGCTCCGCGAGGGGCCTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 488086-488453 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN868537.1 Anaeromassilibacillus senegalensis strain mt9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 488086 33 100.0 35 ................................. CCCCTGCTTCCCGATGCGGTAAATCCCGAAGTCGT 488154 33 100.0 34 ................................. AGCTCTTTCTACATCCAACTGATAAGTTTCATAG 488221 33 100.0 33 ................................. GGCTGACCGCCAAGCCGCACCAGTAAAATGCGC 488287 33 97.0 34 ...T............................. ATTCCAAAGCTGCTTTAGCTTTGTAGGATTACCG 488354 33 97.0 34 ...T............................. CCGCCCTGAATATCATTCGTCCCATAAAAGATGG 488421 33 87.9 0 ...T.......................AA...G | ========== ====== ====== ====== ================================= =================================== ================== 6 33 97.0 34 GTCAAAATCCACGCCCCGTAAGGGGACGGAAAC # Left flank : GCAGGAGGTAGACGCCAGGGAGTGGCGCGAGGAACCGAAACCTGTTAAAGGCTATTACATAGATCCGAATTCTGTAGAGAATGGGATTTCGCCGGTCACGGGGATTCCATATCAGTTCTACAGGATGATTCAAATACAGTCATTACAAAAGGAAAGAGAAAGTTTAACAAATACAAAGCGATCCAAGGGAGAGAAACTAAAAGATAAACGAAGTAAAGGACATTCTAAATAGAATTAAAAGTAAAATCAACCGGTCGTAAGTGTTTAAAGTACAGCGGCTTAAAGAGCAAAAGTCACGTGCGTTGAGCTTTTTCTAACGAGCATATAGATAAAGTGCGAATCGCAAGCTCACATAGATTTCTTAAGAGATTCGCACCTCGCATAGTTACTGGATTTTTTGCATTTTAATTCTCATACAGGGGAATTGTTTTCTCATTTTTATGGGATTCGCATTTTAGGCCTTTACAACCCGCATGGTTACTGGGTATAATAGGGGTGCA # Right flank : GAAGCGCCCATTCCGGAAACTTGCCGGAATGGGCGCTTTGTTCGCGTCTAAAAACTGCATCTGTTCCATTTGTGCGATACTTAGAAATAATAGAAGGTATCAATATATCGCATACCACAGCGGTTAAGAATGGAGGCAGGCAGCGTGGGGCGCAGAGACCTGAATTTGGATGAATACAATATCACAAAACTACAGTATCGAGAACTTCATAACTTTTGTTTGCAATATGCTGATAAGAAACAGCAGCTTGCGGAACTGAAAAATCCATATGGGAGTTCACAGGGTTACAATACGCCGACTGGCTGTACAATAGGAGATCCAACTGCAAGGACAGCGGAACGAATCATAATCCTTTCTAAAGAGATTGAAGCAATTGAACAAACCGCTATGGAGATCGCCCCGGAAGAATACCAGAATATTCTGTTGGCGGTAACGGAGGACGTTCCCTGGCATTTCCTACAGCTGTTAAAAGGGTTAGAAATGGGAAGGCATGACTTTGA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAATCCACGCCCCGTAAGGGGACGGAAAC # Alternate repeat : GTCTAAATCCACGCCCCGTAAGGGGACGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 4 519977-519137 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN868537.1 Anaeromassilibacillus senegalensis strain mt9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 519976 31 100.0 35 ............................... GTAACAAAGTATAGCCCGTTGTCACACTTAAAATA 519910 31 100.0 36 ............................... GTGATCCACGGCTTACGGCAATCCCCGTTAAAACAC 519843 31 100.0 36 ............................... GTGGTTGCCGCAAAAACCCTGCATTATTACTGCATG 519776 31 100.0 35 ............................... GTTTCGCCAAGGACAAGTATCATTGCGACTTCGTT 519710 31 100.0 35 ............................... GTCGTCAGACGGGGACCTTTCTTTTTAGTTGCCTC 519644 31 96.8 37 ........................A...... ACTGCTCCTCGATGTACAGGCACCGCCCAAACGGGCA 519576 31 100.0 38 ............................... ACTTTATTATGCCTCCGGCCTCACGGGTTGGTGGTCTG 519507 31 100.0 37 ............................... ACGTTATGCTGTTAATATGAGTAGCAGCAGGGTTAGG 519439 31 96.8 36 ..T............................ ACACCTTGGCGACGTCGAGATTGTTGAGATCCATAA 519372 31 100.0 38 ............................... ACCATAACATCGTCATTCGATTTTATATGGTGGATAAG 519303 31 100.0 38 ............................... ACCATAACATCGTCATTCGATTTTATATGGTGGATAAG 519234 31 100.0 36 ............................... ACAATTTTTTGTTTTTTGGTGTTGTAATCCTTTTCA 519167 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 13 31 99.5 36 GTCAAAACCCACGCCCCGTAAGGGGACGGAA # Left flank : GAATGTGAAAACATCGGCTACACTCGTAGAAGGCCTGGGCAAGCGGTTCTCGGACAGGAGTTCGATTCTCCTCAGCTCCACCACTTAACCTCTCAGAAAATCGGCATAAATGCTGGATTTTTTGAGAGGTTTTCTTTTTGTAGTTACACCTTTGGTCGTTGTCTGGTCGTTATAAGGTGAGCGTGTTTGTTTTCAAGTAATTCATGGTCATTATTTCACTATTGTGTCAAATCATTTATATTTTTAAACGCGCTTAAGCCGCCTTTCTTATCCACAGTATAATTCAAGATAACAAATTAATTATTATCGATTATATAGAATTATATTCTTTGCGTGCGAACCTAAAGCTCACATAGATTTCCTTGGAGATTCGCACCTCGCATAAATCCTGGATTTTTCGATAATTCGTTCTTACCCGGTATATTTATTTTCTGTTTTCCGTAAGATTCGCACTTTTGGGCTTTACAACCCGCATGGATACTGGGTATAATAGGGGTGCA # Right flank : ACCAGAGCGAACATACAATATTCAAGTTCAGACATAGGGTTTAACTCCGTGCCCTGTAAGGGGGAAAATAAACAAGGCGCCTATCCCATAAGCATATGAGCTTGGGATAGACGCCTTATTTATCTCTTTTAGAATTTACCATGAATGTTTTCGCATTATAAGTACAATATAACAAAAATTCTCGATTCTTTATTGGTTCTCCTTTTCAAATTTTATGTCTGTCAACGTTGCGTTTGCATAGTCACGTATATCAATCGCTGGGACTGTTCCTATTTTATAAAGCTCGTCCAATATCATGTAAAAGAAAGCAAGAACGGTTTCTTCCTCTGTACTGCAGACCCAGGATAAAAATTTTTTATCTTCATCTCTTTTAACCAAGAACGAATGCTTCTTGATGGCACATCCTACGTCTATGTAATGAAATTCTCTCATATAAGATTCAATGGCATTCTTTTCGACTGATCTGATGGCAAGTATTCCGCCAATAATGGGTGGTAGCC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAACCCACGCCCCGTAAGGGGACGGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.20,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //