Array 1 282-1894 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPZ010000052.1 Anabaena sp. FACHB-1250 contig52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================== ================== 282 36 100.0 36 .................................... AGTCCTAGCTCTATTCCCGCTTCTTTCAGGACTATG 354 36 100.0 47 .................................... ATTTGATTTGCCATAAATTCAGTACCGATAATTCCAATAGCTAGAAT 437 36 100.0 39 .................................... AATTTTGCGGTTCTGGATTAAAGATATTTTTTATCTTGT 512 36 100.0 56 .................................... ATTTGTCTGTCTGTGGGGAGGATTAGATTAGCCATTGCAGCAGCTAACCAGTTCGG 604 36 100.0 47 .................................... AAGATGCCAGTTCTTACAAGTCTGGTTACTAATTCGAGTAGTATTTC 687 36 100.0 37 .................................... TTATCCGCTAGATCCTGCCAGGATTTGCACTTAATAC 760 36 100.0 37 .................................... ACGATTCTAATTCATCATGATTGTAATTTGATTTTAA 833 36 100.0 33 .................................... CTATTAAATCTTCATTGCTTAACTTGCTATTAT 902 36 100.0 38 .................................... CAAATAGAAGCTCAGAAAGGTAAAGTCCGTCAAAGACC 976 36 100.0 36 .................................... TTTACTTAATACTAGAATAATATTATTTTGATGTTT 1048 36 100.0 35 .................................... CCGCGATCGCCGTCCAATCCAACTTCAGTAACAAT 1119 36 100.0 40 .................................... ATAAGTATCCAATATCGCCCCGTCAAGCCCAACTAAGTAG 1195 36 100.0 37 .................................... AAAGAACCGGCTCTTTTTGAGAACCGGAATATTACAA 1268 36 100.0 37 .................................... TAGGCAGTGCCAACAACTTCTGTTATCTCTGGATGGT 1341 36 100.0 38 .................................... GACCATAAACAAAGAACTATGCCAAGCATCTTTCTCTG 1415 36 100.0 42 .................................... TCCTTAGCTCTGTAAGGTCTCCATCTGTATAGCCCTCATCAG 1493 36 100.0 38 .................................... AAACTTAATTCCAGTTCCCCAAAGCCCGTTAAATCCCA 1567 36 100.0 36 .................................... TAATTAAAAAAGATTTAATCTTGACCAACTCATCAA 1639 36 100.0 37 .................................... AAAAGCCTGTCGTCTTCGGCGATCGCGCCTAAAACTT 1712 36 100.0 39 .................................... CATCGTAAATGTGTCACCCAGAGGGGCGCGTTCTATGGG 1787 36 100.0 36 .................................... TTTTACCACCGACTCCTATCCATCTATGACTTGTTT 1859 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================================== ================== 22 36 100.0 39 GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : TGCGCCACTAGAGATATTAAAAGAGTATATTAAAAATCAAGAAAAGCCGTCCTAGAAGCGATGCACTGAGCTTGTCGAAGTGGACGGGGCTTGTATCCCATTATTTTCGGTCAGGTAAAATGGCTGTAATGTTTATTTTTTCGTTGGGAACTTCGGTCGCTTGCTGGGTAAGGGTTTTAGGGGTTTTTTCCCGCTCTCTGTTAGTGGTTTTACCACTTTTTTTCCTGATCTTTGGAAACTGTCTCTGGACACCTTGCTGGGTAAGGGTTTAAAATTGAGGAG # Right flank : CTGTAAACTGACGACAGGGCGACGCATTGACCAAATCATCCTGATTTCCAAAGAAGGCAAGCGTACTACCTACTTCCTTAAAAAATAGGTAATTTACCTAATTTGCTCCAATAGAATCGGTATCCTGATGTATACATACATCAGGATTTTTTTATGACGCTCCTAAAATGCTCTGAATGCAACAAAGAAATGAGTTCCAAAGCTACCACTTGCCCGAACTGTGGCGCACCCATGAAGCGCAAATCCGGTTGTCTTGGCAATTTATTTTTCGGCTTATCTGCTTTTTTATTCATTATCTTCCTTATCGGACTCGTAGCTCCCAAGACACCAACTCCACCTCAAACGTCCGAAACGGAAACGCCGCCTTCACAGAATAAGGAAATCGAAACTCAGGAGCAAAAGGCAAAAGCAGAAGAGGAAAAAGTGAAGCAACTGCGGGAAGTTGAACTTAATAAGCAGCGGGACGCTGAAATTAATACGAAGATCGAGAAATTCAAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 3182-2843 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPZ010000052.1 Anabaena sp. FACHB-1250 contig52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 3181 37 100.0 46 ..................................... CTGGCTGGCTTGGAAGAACTATAAAACTAATGTAGGAGTGCTAAGT 3098 37 97.3 35 G.................................... TGGGGTTCTCGCTGGCTATATCTGGCTGAATGATG 3026 37 100.0 36 ..................................... TGTGGTTAGAGTTGCACCAATCCAGAAATTATCAAT 2953 37 100.0 37 ..................................... CCGTCTAGCAATCAAAGTGATTATGAAGGAATAAGTC 2879 37 97.3 0 ..................................A.. | ========== ====== ====== ====== ===================================== ============================================== ================== 5 37 98.9 39 AGTTTCCATTCAATTAATGTCCCCAGCGAGTGGGGAC # Left flank : ACAAATCAAGTAATTGATAAAATCAAGGCTATTTCTATCCATGCCCCCCATGCCTATGCTATTTGTTTAGGCAAAAAACCTTTTGAATATCGCAACTCACCCACAAAAAGAAGGGGTTGGATTTTGATTCATTCCAGTGGCAGCAAGGCTAGTGATTCATGCTTTCCTGAATATGGTATTGACAAAAAAATAGCCGTTAGACAAGCCATTATAGGTGCAAGTTTTATCACAGATTGCAGTCCAGATAGTCAAGGTGGTTATGCCTACAGGATGACAAGATCAATGTTATTTAAAACCCCTATAGAGGGTGTTAAAGGTTGTCAAGCAATATTTTGGGGGCATTGCAAAGACCCTCAAAAAATCAAAGCTTTTGAGCAGGCTATAGAGCAAATAGGGCTTGCACTTAACTAACTTAGATGCACACAATTCCTCAACAGTCTAATTAGTTTGAATGCTAAAAACTTCCCCACAATCCCTATCAAGTTGGTAGGGATTATTAA # Right flank : TTGAGAGCGCCCGTCACCGAAGAAGTGATCAGGCGTATTGAAAAAGCTTTAGGTGTTGATTTTGGCGTAAGTTTCAACGAATAGCCCAATCCCTCTTCAAGCAATGGGCTATTTCCGTGCGTTTATCGTTATCGAATATTCGATAAATTTGTCGGAAAATAAATTAAAAAAAGTGTTGCTAGGACGGCAACACTTAGCAAAAATCAATTCTGGATGCCATATATCTGGTTTATCGGCTAAATTCCCCCTTCACATATTCTTCGTTTCCATAATAGACGTGGCACACGGCAAAATCGATCCCAACTTGGTTGGCGTATGCACGTGCCAGTGTTTCGGCAATAACACGCACGTCGTCGCGGTTGGTGTATTTGTCAGGTGTGAGCGTTACAAGCATTGTGATTTTCCCGGTAATGGCAATGTCTGTTACAGAGGTATTGTTGAGCGCCCATTGTTTGAATTTCTCGATCTTCGTATTAATTTCAGCGTCCCGCTGCTTATTA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTCCATTCAATTAATGTCCCCAGCGAGTGGGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 3 4815-4996 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPZ010000052.1 Anabaena sp. FACHB-1250 contig52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================== ================== 4815 33 100.0 41 ................................. ATTAAAACCTCTACAATTTGATCCACATGACTAATCGAGTC 4889 33 100.0 42 ................................. GTCATGATATTAAATGCTTATCCTATAAAATTGTTCATCTTT 4964 33 97.0 0 ...............T................. | ========== ====== ====== ====== ================================= ========================================== ================== 3 33 99.0 42 CCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : CCGCGATCCCAAACTGATGACTGACTTTTACAAGCGAGATCCAGAACATTTTAATTTTGTCTTAGGAGCGATTTTACATGAAAATTAAACTTGAATATTGCCCGTTTGGTGACATAGGCGAAAAAGAATTTACTTTGGCAAGTGTTGAAGTTGAGACGGAGCATAATGATCCTTTCGAGATCATTAATCCTGTTGTGAAAATTAAAAGTTACCCAGCAGCAAGCGACCAAAAAAACAAGCTGAAAGCCGCCGCAGAAAAAGCAAGTGTCAGAAAAGGCGTAGAAGAGATGGCTTTAAGAGCTTGGAACAGAGAGATTGAGGTTTCGATTGGATTTCAGGGGCATTGCTATGACACAAAAAATCCAAATAATTTAGACCTGTCATCCGCCGTTTATGGATTGGATTCTTTTAAGGTTTTGAGTATAGAAGGCAATGAAGATTTTAAAAATAAAATCCCGCCTATTCCAGAAGGAGCAGTTTCATAGTCAGATGTTTTAGTC # Right flank : CAACGCGATCGCTCATCAATCGTATATATAAATACATAATAAAATATGTACTGATATCAATGTTTGGTAAAGGAAACGCTGTAACTTGATAGCAGCATAAATAAGAACCAATGTCAAAGAAAATAAAATATTTTTAATAAAATCCTCAAAGTCAGGAAAAGCTTACAGAGTAAGGGTTAGAGCAAATATTACAAAAATCTTGAGATATTTTAGATTCCTAGACAAACACTGAATCGCGCTCTTATAATTCATCTATAAGCTAGACAGGGGATCTACCGATGACAGCAGAATATTGGCGGGCTAAGATTTGGGGGTTACTACATGACCCTGTATTAAAGGCATTACATAACAATAGCGGACGGGGTAAAAATAGCTTCTATAAACAACTAGAAGTAATGAAGCCTTGGGTTGAGACAGGTAAAACCCCTGATCAATCAGGTGGTAAAGTATTAGAAAATATCCTCTTAGCGGATTATATAGCTTCAGCTAGTGATAGGTCA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 66630-75213 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPZ010000016.1 Anabaena sp. FACHB-1250 contig16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================ ================== 66630 37 94.6 35 ..........C.........T................ ATAGTCAGTAGGATCATTTGATTCAGACGATTCAG 66702 37 94.6 34 ..........C.........T................ CATAATGCCCCTTGTGTAACACAATAACATAATC 66773 37 94.6 34 ..........C.........T................ AGCAAATACCAACCAGCAAGTATAGACCTGCTTA 66844 37 94.6 34 ..........C.........T................ TTATGATGTTGATGCAATGACATCAGGCTTTGAA 66915 37 100.0 37 ..................................... AAGCCCTGAATTAGCTGATGCGTCCATCCCTAGCGAG 66989 37 100.0 39 ..................................... TTGAAGAATTTGAAGAATTGAAAACTAACGATTTTGAAG 67065 37 100.0 35 ..................................... AAAACTGGCTTAACCAAGATATTCAATTATCAGGT 67137 37 100.0 39 ..................................... GATTTTGAGGGCAACACAGCCTACCGCGTTAACCGGGAC 67213 37 100.0 36 ..................................... TTCTCTTTTTTAACCATTGTTTTAAACTCGGATATT 67286 37 100.0 35 ..................................... GATATTAGTTGTTGGATTAGCGGGTAAGCTAATAG 67358 37 100.0 33 ..................................... ACATTGGGGTATTTCCACCCCAATCGGAAGCGG 67428 37 100.0 34 ..................................... CTATCCTGTAATGATATATTAAATATATAAACAA 67499 37 100.0 36 ..................................... ATACAGGGTCACTGATGTTGTACCAGACTCAGAAAA 67572 37 100.0 35 ..................................... TAATTGCTGACTTTGATACGAAATTAGATAATGCT 67644 37 100.0 35 ..................................... GCATTAATCTAACTAATCCCTCTAATCCTGCATTA 67716 37 100.0 33 ..................................... AATAGGCCGGGTGGCTATTGCGAGAATGCCATC 67786 37 100.0 34 ..................................... ATCGAAGCAAATGGAAAAAACTCTACCATCGACA 67857 37 100.0 42 ..................................... TTTGATAAACGCATCTACCCACATAAAGGTCACGCCCGCCGC 67936 37 100.0 39 ..................................... CTTCTTTTTTCTTCTTAGGGAATATTCCTATTTCTTCTA 68012 37 100.0 38 ..................................... TTTAAATTTATAGCCACTTCAACAACAAACCTATTAAT 68087 37 100.0 35 ..................................... GACACTTACCAGATAACTTGATATCATGTAAACAT 68159 37 100.0 39 ..................................... AACTGATGTTTACATGATGTTTACTTATGATAATAGATT 68235 37 100.0 35 ..................................... AACTCTAGTAGTTGCGTATCTTTATCATGCAACTT 68307 37 100.0 39 ..................................... AACGCAAGCGGCTAAATGTGAATCTTTATCACGCCAAAG 68383 37 100.0 41 ..................................... TGCAATTTCCTTGGTTGGCTTTCCCGCCCCTCCCATAATTT 68461 37 100.0 33 ..................................... GCAGACAATACCATCAGAGGCTACGCTAAAAAT 68531 37 100.0 37 ..................................... ACTGTATCTAGTATCAGGTATCACTTATCAAGTATCT 68605 37 100.0 34 ..................................... TTGATTGAGTTTGGAGATAGTTGCAATGAGTCTA 68676 37 100.0 33 ..................................... TTTAGCGTTTTGGTCTAGAGTACGACTTTTAAA 68746 37 100.0 35 ..................................... TATAAATTGATCATCAAATCCTAATGCCATAGCTA 68818 37 100.0 35 ..................................... TTGTTAGTTGATTTTATATATTATCTCTATTAATC 68890 37 100.0 42 ..................................... GTCGTCTGCTCTAAACGATTGATTTTAAGGCTTCCAATTATG 68969 37 100.0 36 ..................................... CCGATTTGTCAATTTTTGGGGTAAAAACGTCAACTT 69042 37 100.0 38 ..................................... ATTTATTTTGCGTTTAATGTCAACACAAAATAATACAA 69117 37 100.0 35 ..................................... GCCAATAGTATTTTTATATTGGTGTGGTGTTCCTG 69189 37 100.0 35 ..................................... ATGGAAGAGATTAAATCATTCAATCAGAAATTAAA 69261 37 100.0 36 ..................................... TAGGGGATTTATCTGCTATCCAGAAGATTGGGGAAT 69334 37 100.0 33 ..................................... CCCTCATTACAGTTTCCCCCACCCCAGTGTAAA 69404 37 100.0 39 ..................................... AATTAACTACACTTTGTGCTGTGATTTTTCTATCATCAG 69480 37 100.0 31 ..................................... TCATATTCTCATTTCTCATTCTATGTCTGTT 69548 37 100.0 35 ..................................... GGCTTGTTTTTTCCCTCTCTCACTCTTTTATAATA 69620 37 100.0 34 ..................................... AGATTAACGTGAAATTCCGATAACTTAATATCCG 69691 37 100.0 32 ..................................... TTTTTGAAAGCCTTACTGTACAAGCTTTTCAA 69760 37 100.0 32 ..................................... TCATAAGTTTTCTTTTTTGCCCTTCGTTAGCG 69829 37 100.0 34 ..................................... GCGGGTTAGGGTAGGGTTACGCTAGGCTTTTAAG 69900 37 100.0 39 ..................................... TATTCTAGGCGCATCTTCTTCTAAGAACTTGAGATCCTT 69976 37 100.0 39 ..................................... CCGGTACGAATAAAGCCTTCAGTAATATGTGTTGGTCAA 70052 37 97.3 33 ..................T.................. TCTTTATAAGCTATCAGCACGGCTTAAAATCTA 70122 37 100.0 36 ..................................... AGAGGATATGAAACTTATCGGATATATCAGAGTAAG 70195 37 100.0 33 ..................................... ATCTATCAATTCTTCTAGGAAGTGATCGCGCCA 70265 37 100.0 37 ..................................... AATAGAGACTCCCGTACCGATTGAGGGTGAAGCTATT 70339 37 100.0 39 ..................................... CCAATACTAGGAGCTAAAATACAAGATGATTGACCAAAG 70415 37 100.0 36 ..................................... TGAAGATGATCGGACCGGAATAGGGGCGCTGGGAAA 70488 37 100.0 35 ..................................... AATCCCGGCGTAAGTGCCGGGGTTGATCTTAGAAA 70560 37 100.0 36 ..................................... ATGGTGGGGACGCATCAACGCCTATACATGATGCTT 70633 37 100.0 39 ..................................... ATGGGGGGCGGGAAAAGCCAACCACGGTAAACCCACCCC 70709 37 100.0 38 ..................................... CATTATAAAAGAGTGGAGGAAAAAAAAAAGAGTGGGAA 70784 37 100.0 40 ..................................... CAGATGCTTTGCTTTTTTTGTGGGGGTATTGTATGAAAAT 70861 37 100.0 35 ..................................... AAAAGCTGACATCAAACTCGCTGAGTTTCACCAGA 70933 37 100.0 37 ..................................... CGCCTAAATTTGAATAAAGGATAAGTAATTGCATCTA 71007 37 100.0 37 ..................................... GTAATCCAGAAAATAGCTGCGGACTTAGCCAGAAGAG 71081 37 100.0 38 ..................................... CTTTTTTCCTTTCATAGCTACGCATAGCAAAGGCATTA 71156 37 100.0 35 ..................................... CCGTATGAGAATAATGAAGATGTAAAATTTGAATT 71228 37 100.0 39 ..................................... ATCATTAATGTGGTAGATTACTAGCCCCGCTTCAGCACC 71304 37 100.0 33 ..................................... AGTGCTGACCAACGCCTTAATATTTAAAGCAAA 71374 37 100.0 37 ..................................... TCCTGGGGTGTGGTGATGTTTTCCTGGGGTTGTGGTT 71448 37 100.0 34 ..................................... TTAGCTTTTTGATCGACCGTGAGCGCCGTAATCA 71519 37 100.0 35 ..................................... ATATTGAATATATCAATCAAAGAACGGTCATTGAT 71591 37 100.0 36 ..................................... GTTTTTCTGGTAACATTTCCAGATGAAAACAAGCTA 71664 37 100.0 36 ..................................... TCTGATATGCCTAATTGTCTTGATTTCACCACACAT 71737 37 100.0 37 ..................................... TCAATCAAAAACTCTAAATAGTTAAATTGATTATCTG 71811 37 100.0 33 ..................................... TATTTTAAGAGTAAAGGATAACATCTGATTATT 71881 37 100.0 35 ..................................... TACTAAGCGTTGTTTTGAATTTGTACAGGGTAAAA 71953 37 100.0 37 ..................................... ACAAAGATGGTAAGCAATGGGGGGCGCGTATAGCTTC 72027 37 100.0 32 ..................................... AATAAAATGTCAATTTTGTCAATTTCTGATGA 72096 37 97.3 35 ................................C.... CAAGTTACCCGCACCGTCGAGTTTTTGCATTATGG 72168 37 100.0 33 ..................................... CAAAGCGATCGCTCAAATTATGTATCATTAGAA 72238 37 100.0 32 ..................................... ATAATATTTTTACACAGTGAAATTAATTGCTT 72307 37 100.0 35 ..................................... TTTGACTTTCAATTGTAGATTTTATAATCACGCTT 72379 37 100.0 34 ..................................... ATCTATTTTAATTTTGGCATAACAGGCTTTATCG 72450 37 100.0 35 ..................................... ATTAATCGCTATTTTTGCATCTTTGCAATCATCGG 72522 37 100.0 34 ..................................... TGCGTATCATCATTAAAGACGGTAGTGTTTCCTA 72593 37 100.0 35 ..................................... TTTAAAAACTCAGGCCGCCCTCGCGGCCTAAAAAA 72665 37 100.0 34 ..................................... ATTATAAAAGAGTGAGAGAGGAAAACAAAGCGGA 72736 37 100.0 35 ..................................... TATGGAGTACGTCGCAAATAAATGCGGATATACAT 72808 37 100.0 34 ..................................... AATAAGCAAGCAAGCAAGTAACATCACACTTGTA 72879 37 100.0 36 ..................................... TAAATACACCCGATTTCAAGGAAAAACTCACTAAAG 72952 37 100.0 34 ..................................... TCTACAGGCACTTCCTTCACCACTTCTATAACCT 73023 37 100.0 34 ..................................... GACCGGATACAGCGATCAAGCCTACTGCTAATTC 73094 37 100.0 42 ..................................... CTGAGGTGAGTGACGGGTTAAACTCAGTTTTGCTCTCATCAG 73173 37 100.0 34 ..................................... TAACCAGAACTCAAGGCTACACTCTGCTATATCT 73244 37 100.0 34 ..................................... GATTTTTTCCCAGCTAAATACCAAATAAAGGATG 73315 37 100.0 34 ..................................... AGCAAATAGCTACCAAGTGCAAAAGCTACGAAGG 73386 37 100.0 34 ..................................... CAAATACCACCATTGAGACTAGCATCCAAAGATT 73457 37 100.0 39 ..................................... AACTAATCAGTTACATGACAAGGATATGCAACTACTAGA 73533 37 97.3 34 ....................T................ TTTTTAAACTCGATAATACCGTACCTACTGATAA 73604 37 97.3 35 ....................T................ AATTTTTGCTATTGGGAACAGCATCTTTAACTCAA 73676 37 97.3 37 ....................T................ CGATGGTAACGGGTTCGGTGGTAACGGGTTCGGTAGT 73750 37 97.3 34 ....................T................ ATCATATAGGTATCGCCAGAGATATCAATCAGAG 73821 37 97.3 37 ....................T................ GCCGTGGTTGTATTTTATTCTTCTTTTAGAAGTTCTG 73895 37 97.3 36 ....................T................ AATAGTAAACAAAAAAATGACAAGACAAATATTCTG 73968 37 97.3 35 ....................T................ CCCACACGCTACCACCGCACGATAAGGCCTAGTAA 74040 37 97.3 37 ....................T................ CTCCAAGAAAACTTAAAAAACTATCTTGAGAATATGA 74114 37 97.3 36 ....................T................ CATATCGCAGATATGGACTGAAATACGGCACAGAAA 74187 37 97.3 37 ....................T................ GTCGGAAGGTCACAACATTGATGCGGCGGTGTCGCAA 74261 37 97.3 37 ....................T................ ATTATAAAAGAGTGAGAGAGGGAAAACAAAGCGGACC 74335 37 97.3 37 ....................T................ TATTTCCAAGGTCCAACTTCCAATTCTCTGATGATAT 74409 37 97.3 38 ....................T................ TTGATATGTGCATTAAATAATTTTTTACTATCACTAAA 74484 37 94.6 34 ..........C.........T................ TCTATTCCCACTTTAAAACCGGGGATCATCTCAA 74555 37 94.6 31 ..........C.........T................ ACTCATTTTTTGCCTCCTTATAAGAAGATAG 74623 37 94.6 35 ..........C.........T................ CTATTTTGATATAATTGTATCAAAACCTACTTATT 74695 37 94.6 41 ..........C.........T................ CCATCTAGCTTGTCTTTGAAAACAGGAGGACCATAGATATT 74773 37 100.0 39 ..................................... TATCAATCTTTTATTTTGTTTTTAATCATGTCTGCATTA 74849 37 100.0 33 ..................................... AACATTTGGGGTATAAGACTTGCTTATACAAAC 74919 37 97.3 80 ....................T................ AACGAACGTAGGGGTTAACGGCCGTTAACCCCTACACAATTGCAATTTCACTTGTGATATAGTGAATCTATAATCGTAAG 75036 37 97.3 35 ....................T................ ATTGGAACTATTGCAACGCCAAAAAATCATTCAAT 75108 37 89.2 32 G...............C...T..........C..... ATTGGAAATATTACTGGAAAGTCTATCCAATG 75177 37 97.3 0 ...............................C..... | ========== ====== ====== ====== ===================================== ================================================================================ ================== 118 37 99.1 36 ATTGCAATTTAACTTAATCCCTATTAGGGATTGAAAC # Left flank : AATGTTGTTATTTCTTACGATATTTCTGAGGATAAACGACGTACTAAAATCCATAGTATTCTCAAGTCCTATGGACAATGGGTGCAGTATAGTATTTTTGAATGTGAGTTAACTGATACTCAATATGCTAAATTGCGATCGCGTCTTAATAAACTCATTAAACCTGAAACCGACAGCATTCGCTTTTACTTCCTTTGTGCTTGCTGTTTTGGTAAAATAGAGAGAATTGGTGGTGAAGAACCCCGTGATCAGACAATTTTCTTTGCTTAATAATGCGCGGATGGGTGGGTGTAAAAAATTCAGATCAGAAAAAAATGCCTGCAATCATTTCTACACAAGCTTTTCATCGAGTTCATGGAGTTCACCCATCCGCGCACCTTGCACAGCAAGAGTTTCAGCTATTTTACCCCTTGACACTTTTTTTGAAATAGATTATCATAAGAACATCCGCGCAACTGAACCTTGAAAACTACATATATATAGGCTTTCAGCATTCCGCT # Right flank : CATTATTAAACTGTAACCTGTCACCTGTTCCCTGTCACCTGTTCTCTGTCACCTAATTGCAATTTCACCTACTCCCTAAGATATTGGATTTTGTTCCTCCACCCAAATTACATAATTTATTTCGTGGGTAATTTTGGATGTTCTTGGGAGTATTTACTGACTAGGTTGGATACTTCCGGGTTATACAGTCGCAGGTAATTCCAGTAATTACCGAATACTTGACGGACATAATTTTTGGTTTCATCAAAGGGAATTTCTTCTACAAATTCATCAGGATCTTTTTTGGGTATGGTTTGCAACCATTTAGCTACATTACCCGGACCTGCATTATAACTAGCGATCGCTAACATGGAATTATTGCTATACTGTCGATGAGTATAATCTAAGTACCAAGTCCCCAACATAATATTATCATTGGCATTTTCCAAATTGATTTTTTTGATATCTGCATTCATTTGTGGGGCTATCCACGCTGCTGTACTGGGCATAACTTGCATTAA # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTAACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //