Array 1 153910-153759 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048289.1 Streptacidiphilus sp. P02-A3a chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 153909 29 100.0 32 ............................. TACGCCTGTAGGAGGGCAACATGAGCATGCTT 153848 29 96.6 32 ........................A.... CCGATCCCGCGGACCGTATCCAGCCTCGCCTC 153787 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : TCACTCACAGTAATGCGGAGTGCTACTCCCCCGCACTGGCGAAGCCCCAGCATCGGAAGGCTCTCAAGGTACGCCCGACTCCCTTCCCGTCACGCGAACTTCCAGAAAACCGAGCCCACCCAGTTCCCCCGTGCCCACGCAGGGCACGCTGCGCCTCTCCCTCAAGCAACAGATCAGCCAACGACCGACGCTCACCCAGCAGTCACAGCACATGCAAGACGCTTCGCCCAGCCCAACATCAGCAAACGGCTGCTACGTACAGCGTGCTCAACGGAATGGCGGAACCGGAGCCAACGTCCTTATCGTGACACCCCGGGGACTCCCCTGGACCAGAGACAGCTAGGCTGCCGAGGACGTACATCACCACCGAGTACTCCCCGGGATGGCAGGAGGGATTGCATGCTCAACGTAGCCACTAGCGTCATCTGTCCCAAATTGCCGGAATCCGCAAAAGTGCTCGGATTCCCTCCCCGACAGCCATAAACCCGCAGCTCAGCAAG # Right flank : GACGACGTCATCGAAGGCGACCTCCTCGGCCATGTCGGCAACGGGTGAAATGGGGACCACGGACGGCGTATCAAAAGCGGGCCACTGGGTGATCTCTTGATCATTCTGACTTCATTGGGCTGGAGTCAGGAGGAAGAGAGGGTGATCCACGTGGAGGACTGGGCTGAGATTCGCCGGTTGCACCGGGCTGAGGGGTTGTCGGCCCGGGCGGTGGCCCGGCAGCTGGGGATTTCCAGGGGCACCGTGCTGCGGGCACTGGCCTCGGACCGGCCCCCGCAGTACCAGCGTCCGCTGAAGGGCTCGGCGGTGGACGCGGTCGAGCCCGCAGTCCGCGAGCTGCTCAGGCAGACCCCGACGATACCGGTGACCGTGATTGCGGAGCGGATCGGCTGGGAGCGCGGGCTGACGATCCTGCGTGAGCGGGTGCGTGAGCTGCGGCCGGCCTTCCTGCCGGTGGACCCGGTCTCGCGCACGGTCTACGAGCCCGGTGAGCTCGCGCA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 163844-164239 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048289.1 Streptacidiphilus sp. P02-A3a chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 163844 29 96.6 32 ............................G CGATCGTCATCGGCATCGCCCTCTCCCAACTC 163905 29 100.0 32 ............................. GGTCAGGGGGACTGCGTTGAAGTTGGATCAGC 163966 29 100.0 33 ............................. TCCCCGCCGCCATCCGCACACTCCTTGATAGTG 164028 29 100.0 32 ............................. CGGCCAGCCCCGGCAACCCCACCATCCCAGGA 164089 29 100.0 32 ............................. GCCGCCGAAGCCGGACCCTGGAGCGACCCCGC 164150 29 96.6 32 ..........T.................. CCGGATGCCCATCAAGGAAGAGGCGCGACTGC 164211 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 7 29 99.0 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GACGTGCAGGTGGCCGCCGGCGTCAACTACGGCTACGAGGAGACCTGGTGACCGTGATCGTGCTCACCAACTGCCCGGTCGGCCTGCGCGGCTTCCTCACCCGCTGGCTCCTGGAGATCTCGCCGGGAGTCTTCATCGGCAACCCCTCAGCCCGAATCCGCGACATCCTCTGGGCCGAAGTCCGCACCTACGCCAACCAGGGCCGAGCCCTGCTCGTGCACACCGCCAACACCGAGCAGGGCTACACCTTCCTCACCCACGACCACGCCTGGCACCCCGTCGACACCGAAGGCCTCACCCTCATCCGCCGCCCCAACGACACCCCACCCACCACCGCCCAAACCCCACCACCAGGCTGGAGCGCCGCGTCGAAGCGCCGCCGCTTCGGCCGCCAATAGCCCCAGAGATGGCCGATGCAGGATATTTGATCCCGATTGTCGGAATTCATGAAAGTGCTCAAAATCCGCACCCTCCCGCAATAAACCCCCAGGTCACCCAGA # Right flank : CTCGCCGTCGTGTGCGCGCAGGAGCACCAGGGCCTCCTGGAGTTGCGGCAGCCGTTCGGGTTCGGTCCGGCCCAGGCCGGTGCCGGTGCCGGAGACCGAGAACGGGCCGAGGAGTCCGGCCTGGAGGGCCGGGGCGCCGAGTCGGCGCAGGTCGGTGACCTGGGCGGCGGACTGCTGGGCGGCGGGGGCTCCGGGGGTGTCCCGCGGGCCGGTGCCGACGGCGAAGAGCTGGAGCAGGGCGTCCACCTCGGTCCGCGGCAGGCGCTGTGCGAGGGCGCTGGTCATCGGCGGTGACGCGGAGGAGATCGGCAGCGGCTTCAGCGGCTGGCAAGTGGACGCCAAGAAGGGCAGGCGCGGCGCGCTGCTCTCGCCGCAGGGGATCACCAACGGCGAACTGCTCGGCGTACGGCTGCCGCGCAGCTCGGTCGGCGGTCCGATCACCCCCGGTCGCGCCCTGGTGCACCTCGGCGACGGCGAACTCCTCACCGTCCAGGTGCCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //