Array 1 82119-81437 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAR01000020.1 Streptomyces aureocirculatus strain NRRL ISP-5401 contig20.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 82118 29 100.0 32 ............................. CTGCACGCCCTGATCAACTCGCGGCTACCGGG 82057 29 100.0 32 ............................. CTCACCGCGGCCGACGCACTCGCCACCCTGCC 81996 29 100.0 32 ............................. GGATCACCACCGTCACCGAACAGCCCACCACG 81935 29 100.0 32 ............................. TTCACGCGTCCTCCTTCGCGGAGATCGTGGCG 81874 29 96.6 31 ............................T GCGCCGCCAGCTCGACTCCACGCAGGCCTCC 81814 29 100.0 33 ............................. AGGGGCGTCCCCGGTTTCGTCACGTGACGAATC 81752 29 100.0 32 ............................. CGGAGCTACCCGAAGTGTAGTTGGGCGACTGG 81691 29 100.0 32 ............................. GGGCCCGCCGCCGCGCTGCTGGTTCGGCACAT 81630 29 100.0 32 ............................. GGCCGGCAGGCGTTCGGGTCCTGAGCGCGGGA 81569 29 100.0 15 ............................. TGGCGCTGCGGGCCG Deletion [81526] 81525 28 82.8 30 ..C.A.T...-..............C... TGGACCAGGACCAGCTCGCCGACCTGGACC 81467 29 82.8 0 ....A......CTG.......A....... | C,C [81457,81464] ========== ====== ====== ====== ============================= ================================= ================== 12 29 96.9 30 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : GGCACAGAGGAACCGATCTGGTGACGGTCATCGTGCTCGCCAACTGCCCCTCCGGACTCAGAGGGTTCCTCACCCGCTGGCTCCTGGAGATCTCCCCCGGCGTCTTCCTGGGCGCTCCCACAGCTCGCGTACGAGACATCCTGTGGGCAGAAGTACGCCAGTACTCCGGCCAGGGCCGCGCTCTCCTGGCCTACCAAACCGACACCGAACAGGGCTTTGCCTTCAAGACCCACGACCACGCCTGGAACCCGGTGGACCACGAAGGCCTGACCCTGATCCACCGCCCGTCCCCCGCCGCCCCTCACTCCGATGGCAGTCAGCCGTCGCCACCTCGCTCGGGATGGAGCAAGGCGTCGAAGAGACGACGGTTCGGCGGCTGACAACCACAGCACACCTGGGCCTCCCACACAGACATGAAGCCCGATTTATTCCTTATGTCGAAATCTTGCATAGTAAGCAAAAGCGGGCACCCCTGCCCATAGACATGCAGGTCACTCACG # Right flank : GAATGCGTCCGGCGGCAGTCAGGCGCGTACGTCCCGCTGCTGCACCTCCTTGAGGACCGCCGCCACCGTGGCGAAGTCGTTGTCCACGTGGAGCACCGTGTGATCGTGATGGACCGCTGTCGCACACACCAGGAGATCGATGGCTCCGGCGGCACGGTGCTGCCCGTGCTGCCCTTGCTGGGTGAGCTTGTACTGCGCGTTCTCCACCCAGCGCCACGCGTTCTTGGGAACCGGTGAGAAGTGGCAGAGGGCATCCAGCTCTTCGGCCAGCTCGTCGCGGTGGGCCGGGGTGGTGGCCGAGTAGAGGAACTCCGCCCTCGTGGGCTCACAGATATGGAACACGCCCGCGGCGATGTGCCCTTCCCAGGGCCGCAACGCCCCCGGCGTACGAAAGAGATGCCACAGGGCGGAAGTGTCGAGGAGGTAGGTGATCACTCGAAGGCCGTCTGACGGGCCCGCTTGGCAGCCGCATGCGCCGCAGCAGCCGCCTCGAACTCGCC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 93742-92431 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOAR01000020.1 Streptomyces aureocirculatus strain NRRL ISP-5401 contig20.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 93741 29 100.0 32 ............................. GTGCGCCTGGGCATCGGCGAGCCCCTCCACAT 93680 29 100.0 32 ............................. GTGTCGTACGACCTCACGTTGCTCGACCGTGA 93619 29 100.0 32 ............................. CATGCTCCGCTGTTCCGGAACTGTCAAGCTGT 93558 29 100.0 32 ............................. CAGGAGAGCGGCGGAAACGCGCGCGCGATCAA 93497 29 100.0 32 ............................. TGGTTGCGCATCGTGTACGTGACCGGCGGGGG 93436 29 100.0 32 ............................. GGAAGATTCGCGCGATCCAGGACCACAATTCA 93375 29 100.0 32 ............................. GGGACTCGGCGCATGGGGACCGTGAACGACGT 93314 29 100.0 32 ............................. CGACGAGAAAAAGCGCTGCATCAAGGGCACTG 93253 29 100.0 32 ............................. GCGCGGCTGACGCTCGGCGCGTACTTGACCGT 93192 29 100.0 32 ............................. CGGTGCCCGGAGGGGACGAGCGGCGAGCAGCC 93131 29 100.0 32 ............................. GAGGAAGGTTGTAGCGACTGACCTGCTACTTT 93070 29 100.0 32 ............................. CGGCAGTCGGTGATGAACCCGTCTGCGGCGCC 93009 29 100.0 33 ............................. AGGACGCAGCCCTGGCACTGGCGCGGCTGGCTG 92947 29 100.0 32 ............................. GACACCGTCGCCAGCATCATCTCCGGCCTGGC 92886 29 100.0 32 ............................. ACCGAGTCCAGCGAGATCAGTACTGCCGGGTG 92825 29 100.0 32 ............................. CTCAGGTAGTGGGTCCCCCCGAACCCCAAATC 92764 29 100.0 32 ............................. CGGGTCGCCGGGGTCGCAGAAGAGCCGATGGC 92703 29 89.7 31 ........................TC..T TTCAGCATCACTGTCAGCACGCTGAACGAAT 92643 29 100.0 32 ............................. GGCTTGTTGGCCGCCGTGGGTCTTGTGGTCCT G [92634] 92581 29 96.6 33 .................A........... GGGATCTACCTCGGCGTAGACACGAACGGGCAC 92519 29 100.0 32 ............................. AGCAACACCTGGTGCTGCGGCATCCCGCCGGT 92458 28 75.9 0 ....C...........-.A....C.G.TT | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.3 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : GACAGATTCGCCGACGGATGACTCCCGCTGGTGCAGCGCAGACACCACGAGTTTGCTTGAGGTACTGAGCGAGCTCCGCAGGCATGACGCAGACTCGGCACGCGAGCCTCTCGGCGGACGACTGGGGGCGTGAACGGTCAGCACCTGCGAATCCGCCTCAAGCCCCGCAGGAGCAGGGAACACGCAAATACCAGAGATCCCCAGGGACCACCCCCGCAGACGCGGGGATCGCACACGCACGCCAATCCATCGGCGAGCGGCGCTAGCGAACCTTCGGACAACTACGGCCTGGAACAGCTCTTTTCAGAGTGAGAGGATGCTGGGCCCCCGCCCGCTTCGCAAGTCTCCAAGGTCGTTCTTAGGCTGCACTCTGGGTACCGCAGTATCAAGACGTTCTACTCATGGGCCATGAAATTTGAAGGCAGGTGCCCTAAATGTCGGTTCACATGCTAGTGAGCAAAGTTGACTCCCCCAGACCGTGAACGTGCAGGTTGCACCCT # Right flank : AAAGACTGTTCGGCAGTGCCAACTGGGGATCTATCTGTATTACAGCCGACTTCGTCAAAAGGCTACCCTTCACCGCTCGCCCCGTGTGTACGCTCGCCGCAACCAGCCCTCGCAGCGAGCCCGTTCACGAAATCGGCCGGACCCGTTGCACCTCCCCGTCTCACCGAGGAGGCCGGGCCCGGCCTGTCCCTAACCACCTGACGATCGTAGGAACGCACTCATGATATTACGTTCAAGTCGCAGCTCAGAAGGCCCATCCGGCCCGTTCGTCGCTCTTTACGCTGTGCTCGCGGCGCTCCTAGCAGCCTGCCCGCCCGCACCTTCTCCGTACGCCTCGTGGGTATGGGGTGCCGTCGTGGTCGTGGTCATCGTCCTGGTGATCGCGCAGTCGACGTTGGGCAGCGCTCAGGCCTGACGGAGCTGCCGCGGTCGGCATCCGGTACGCAGGGTGCCGACCGTTCCCGACGTGGTCTTCGACGCGTCCCCAGCGCCTTACTACG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //